MS000440 (gene) Bitter gourd (TR) v1

Overview


Name	MS000440
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein REVEILLE 6-like isoform X1
Location	scaffold44: 1692700 .. 1696346 (-)
RNA-Seq Expression	MS000440
Synteny	MS000440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCAAAGTCTGCAACTGCAAACTGCCATTCTCGAAGCTCGTGTTCGGGCCGCGCCCTGCAGAAGAATCCAGATTGGATCCGTACAAATGGCGTTACCGTTCGACACTGCTACGACGTCGTCGAGGGAGGACCTGTGGAAGAGAGCTCGGAAACCGTATACCATCACCAAGTGCAGAGAGAGCTGGACCGAACCAGAGCACGATAAGTTCCTCGAAGCTATTCAGCTGTATGATCTTCCCTCTCTTCTCTTTCTTTTCGATCTTATATGTTCTTCTGATTTCCTCTCTTTTTTATTTGGTGCGATTTGAATTTTTGTAAGAGAATAAGAGTTTGTGACTCTGTATGAGGATTATGTGTGCTTATGTTCTGCGTCATCTTTGATTTAAGGTTTCCTGAATCGATGATCGGATTGTTTTTTTTAAGAGATTTTGGAGTATCTGAATCTTTGTCGAAGTATATAGTTTGATTATTTGGAGTATTATGGGGAAGGAAATGAGGCAAAGCATTTTAACTGATATTTTGTGTTTGCTTGAGCTCAAGTCAATTTCCTTGTGCATTTTCTGATCCTGATTCTATTTTTCAGCTTTGATCGTGACTGGAAGAAGATTGAAGCTTTTGTTGGATCGAAGACTGTCATACAGGTAATGTAAGAGGCTTGTCTCACGTCCCGCTTTTTACTTTTACGAATTAGAGGAACAAATCTGGAAATGTTTTCATTCTTCTATCTTTAATTATTGAGAAAAAACTGTGTTTCGTAACATTCCATCTTTCTGGTCTTTTTGTCTTTCTCTAGTGTTTCTAAGATTATGGATAAGTCCTGGAAATTGGAACCTTAGTACGTTTTTATGAGTATAGAATCTAATGCGAAATATTATGGAAGTTTAAAGATTATGAAATAAGTTTATATATGTTGTTATTTTTGGTTAAACACATCAATTTCAACGCTTATGTTATTCTCAATTCTAGAAACGAAAGTAAAAGTGATAAAGTTACTGTTTCCTGTTTCTGAACTTTGAGTAGTAAATAAGAAAACTTTGTAGTTTTTCCAGAAAAGAAGTACAGGGAACTGAAAAAGCTTAATGAATTTTAGTCTTTAACTTACACTTTTATTGCTTCATTTTACCGTATTCTGCTCTCATCGCTTGTTATATGAATATGAATACTTTTTTGCTGCTGCTTTCTTGATATTTTTTCTTCTTGGTTTACCCCCGAATGAATTAAGTTATTTAATGACACAAGTTAGGTAGCCTTGCTGCTGATTATTTCCCTTTGTATTCCAAACTCCATAATCTTCATTCAAGATGTATTACTCTATCTAATTTTCCCTTCAAATTAGTTTAATTCATATTCTGCACTCTATTCATTTCTAGTGCTAAAGAGAATTGTATAGCTTGAAGATTCTTGAGTGCTTCAAGCTTTTGTTCTTCTTTCACTCTGAGGTAGATGATTTTTGTCAGATACGTAGTCATGCACAGAAGTATTTCCTGAAGGTTGAGAAGAGTGGGACAGGCGAACACTTACCTCCTCCACGACCAAAGAGGAAAGCTGCTCATCCATATCCTCAAAAAGCTTCAAAAAATGGTCAGTGCTAGTGCTAGTGCAAGTTCAATTTTAATTTTTTTCTGTTGACAGCATAATATTAACGATGCTTTCTTACAATGCCAACCCATTTTGGTCTCAGCTCTTGCACTAGTCTCAGGGTCATTTCAGTCATCTTCTGTTGAACCAAAATATATTTTAAAGCCAGATTCCTCTTCAGTTCCTGCGAGTTTCATTTCTGCTGCTGCCATGTCTTCCAGGGCGGATAACTCTATCCAAGCAGTCAATTTCTCTCAAGGTGCAAGAGGTTTGAATTCTGATACCGCAATTGAGAGTCTAGACATGATCTTGCATTTAGTTTTCCTCTTCATGATTTTGTTTGCAACGGGGAGGGGTTGGCAATTTTAGTACTTGTTAATTAATAAACTTTTTCAATTTTGTTGTGGATGCTTTGATTGCGTTTAGATGTTTACTTTCTATTTCGTGCTTTCAGGGCAAATTACAGATAACAATTGTTGCAGTAGCACAGAGCGCATTCCAAGAGCAAGCTTTCCAACTAAATCAATCATTGAGGAACAAAACAACCATCAGCTGAGAGGTGAAGCTAGAAGCTTTGATATACTATTACCTGTGATATATTTCTGTATAGTATATTTCATACTTTTTTCCTTCTGGCTCGAATTCTCCATCAAAAAATTTGTCTATAAAAGTTCAGGTAGAAACACACTCCAATAAGTAGTAGAAGAGTAACAATGACAAACTCTTACAGAACAAAAGCTCCAACTCAAAGCAAAAAAACTGTAATATACCAAGTCTCCAGAGGATCCCTACAAACATTTTGGAACAACATCCTATTCCTTTCTAGCCAATGTTACAAAAGCAGCTTTAAATATAATTTAACCAAGAAATATTATCTATCTTTCTGAACTTAAGCCACATAAAAGGGCCAACATCAACTCTTTCTCCGAGCTAGGAAAAAAACCAACTCCAAAGATCTGAAAGAGGTCCCACCAGAATATTTAAAGAACTATTAGAAGTACAGTCACTAACGAACTATTTTAGGACAACATTCTGCAGAGGACATCAGTTTAGTTGAAGAGGAAAATTTAGTGCTAATACTTATACTTCCAAGAAAAATTAACCAAAGGACTACCTTGACTTTGTTACTGTACTATTTCTCCAAAGATTTTTTTTTTATATATTTGATTTAGAAATGGTCCTCAGTTTCTGTCTAACTACATTCTGAGGACCGGTTTACACTCTTTATACACATTGGTCACAGGGTAAATTTGTTGTTTGGACGTACATTTGGAGATGGACCAAATTAATTATTGCAATCATTAATCGTTTGACTTCTTGATTCTGTACTCTTATTTAAATACTAATAAGCTGAATGTTTCTTATCCAAAAAAAAAAAAAATCTTGTGGCCGATAGACAATTCAAACTGTAATTTTAACTGTTTCGAAAGCATTTGTACATCGTCGGAAGAGACCCCATATGTGCAAGTGGACAAGCATAGATAAATTATTTCTAAGCTGAATTAGCAGGTGGGATGTCCTTACTGGCATTTACAAATCCCAGTTACTTCAATTGATACAGTAAATCCAAAGAAAATTATCCTCAAGATAGTTCTTCTTCCATTAAATATTACTATGTCTCTTTTGATGTTCTGTTAAATTTTCGATACAATGCAGTACTGCCAGATTTTGGTCAAGTGTACAACTTTATTGGCAGTGTGTTCGACCCAGAAGCTACAGATCATCTGCAGAGGCTAAAGAAGATGGACCCTATAGACGTCGAAACTGTATGTTTTTGTTCTTCATTTCATTGATTCTACCATGAAATACTACCGATTGGCTCTACCACACCTTTTGGTAGAGCTTTACCTCCATCTAAAATTTTGGTCAGCAGCCTCTTTACTAGCTTAGTACTTCACCTACCATCTCGAATGTTCCTCCTGGCATCGTATATAAATCATGTCATATGCTTAATAACTTTGAATATCTAATATTCTTGTCCCCTCTCTAGGTGCTGTTGCTGATGAGAAACCTGTCCATTAATCTGGCCAGCCCCGACTTTGAGGACCATGTAAGCATTTGCACTTCC

mRNA sequence

CTGCAAAGTCTGCAACTGCAAACTGCCATTCTCGAAGCTCGTGTTCGGGCCGCGCCCTGCAGAAGAATCCAGATTGGATCCGTACAAATGGCGTTACCGTTCGACACTGCTACGACGTCGTCGAGGGAGGACCTGTGGAAGAGAGCTCGGAAACCGTATACCATCACCAAGTGCAGAGAGAGCTGGACCGAACCAGAGCACGATAAGTTCCTCGAAGCTATTCAGCTCTTTGATCGTGACTGGAAGAAGATTGAAGCTTTTGTTGGATCGAAGACTGTCATACAGATACGTAGTCATGCACAGAAGTATTTCCTGAAGGTTGAGAAGAGTGGGACAGGCGAACACTTACCTCCTCCACGACCAAAGAGGAAAGCTGCTCATCCATATCCTCAAAAAGCTTCAAAAAATGCTCTTGCACTAGTCTCAGGGTCATTTCAGTCATCTTCTGTTGAACCAAAATATATTTTAAAGCCAGATTCCTCTTCAGTTCCTGCGAGTTTCATTTCTGCTGCTGCCATGTCTTCCAGGGCGGATAACTCTATCCAAGCAGTCAATTTCTCTCAAGGTGCAAGAGGGCAAATTACAGATAACAATTGTTGCAGTAGCACAGAGCGCATTCCAAGAGCAAGCTTTCCAACTAAATCAATCATTGAGGAACAAAACAACCATCAGCTGAGAGTACTGCCAGATTTTGGTCAAGTGTACAACTTTATTGGCAGTGTGTTCGACCCAGAAGCTACAGATCATCTGCAGAGGCTAAAGAAGATGGACCCTATAGACGTCGAAACTGTGCTGTTGCTGATGAGAAACCTGTCCATTAATCTGGCCAGCCCCGACTTTGAGGACCATGTAAGCATTTGCACTTCC

Coding sequence (CDS)

CTGCAAAGTCTGCAACTGCAAACTGCCATTCTCGAAGCTCGTGTTCGGGCCGCGCCCTGCAGAAGAATCCAGATTGGATCCGTACAAATGGCGTTACCGTTCGACACTGCTACGACGTCGTCGAGGGAGGACCTGTGGAAGAGAGCTCGGAAACCGTATACCATCACCAAGTGCAGAGAGAGCTGGACCGAACCAGAGCACGATAAGTTCCTCGAAGCTATTCAGCTCTTTGATCGTGACTGGAAGAAGATTGAAGCTTTTGTTGGATCGAAGACTGTCATACAGATACGTAGTCATGCACAGAAGTATTTCCTGAAGGTTGAGAAGAGTGGGACAGGCGAACACTTACCTCCTCCACGACCAAAGAGGAAAGCTGCTCATCCATATCCTCAAAAAGCTTCAAAAAATGCTCTTGCACTAGTCTCAGGGTCATTTCAGTCATCTTCTGTTGAACCAAAATATATTTTAAAGCCAGATTCCTCTTCAGTTCCTGCGAGTTTCATTTCTGCTGCTGCCATGTCTTCCAGGGCGGATAACTCTATCCAAGCAGTCAATTTCTCTCAAGGTGCAAGAGGGCAAATTACAGATAACAATTGTTGCAGTAGCACAGAGCGCATTCCAAGAGCAAGCTTTCCAACTAAATCAATCATTGAGGAACAAAACAACCATCAGCTGAGAGTACTGCCAGATTTTGGTCAAGTGTACAACTTTATTGGCAGTGTGTTCGACCCAGAAGCTACAGATCATCTGCAGAGGCTAAAGAAGATGGACCCTATAGACGTCGAAACTGTGCTGTTGCTGATGAGAAACCTGTCCATTAATCTGGCCAGCCCCGACTTTGAGGACCATGTAAGCATTTGCACTTCC

Protein sequence

LQSLQLQTAILEARVRAAPCRRIQIGSVQMALPFDTATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSSVEPKYILKPDSSSVPASFISAAAMSSRADNSIQAVNFSQGARGQITDNNCCSSTERIPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNLSINLASPDFEDHVSICTS

Homology

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BLAST of MS000440 vs. NCBI nr
Match: XP_022140978.1 (protein REVEILLE 6-like isoform X1 [Momordica charantia])

HSP 1 Score: 505.0 bits (1299), Expect = 4.3e-139
Identity = 253/260 (97.31%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 30  MALPFDTATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 89
           MALPFDTATTSSREDLWKRARKPYTITKCRESWTEP+HDKFLEAIQLFDRDWKKIEAFVG
Sbjct: 1   MALPFDTATTSSREDLWKRARKPYTITKCRESWTEPQHDKFLEAIQLFDRDWKKIEAFVG 60

Query: 90  SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS 149
           SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS
Sbjct: 61  SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS 120

Query: 150 VEPKYILKPDSSSVPASFISAAAMSSRADNSIQAVNFSQGARGQITDNNCCSSTERIPRA 209
           VEPKYILKPDSSSVPASFISAAAMSSRADNSIQ VNFSQGARGQITDNNCCSSTERIPRA
Sbjct: 121 VEPKYILKPDSSSVPASFISAAAMSSRADNSIQTVNFSQGARGQITDNNCCSSTERIPRA 180

Query: 210 SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR 269
           SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR
Sbjct: 181 SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR 240

Query: 270 NLSINLASPDFEDHVSICTS 290
           NLSINLASPDFEDH  + +S
Sbjct: 241 NLSINLASPDFEDHKKVLSS 260

[Close]

BLAST of MS000440 vs. NCBI nr
Match: XP_022140979.1 (protein REVEILLE 6-like isoform X2 [Momordica charantia])

HSP 1 Score: 494.2 bits (1271), Expect = 7.7e-136
Identity = 250/260 (96.15%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 30  MALPFDTATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 89
           MALPFDTATTSSREDLWKRARKPYTITKCRESWTEP+HDKFLEAIQLFDRDWKKIEAFVG
Sbjct: 1   MALPFDTATTSSREDLWKRARKPYTITKCRESWTEPQHDKFLEAIQLFDRDWKKIEAFVG 60

Query: 90  SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS 149
           SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS
Sbjct: 61  SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS 120

Query: 150 VEPKYILKPDSSSVPASFISAAAMSSRADNSIQAVNFSQGARGQITDNNCCSSTERIPRA 209
           VEPKYILKPDSSSVPASFISAAAMSSRADNSIQ VNFSQ   GQITDNNCCSSTERIPRA
Sbjct: 121 VEPKYILKPDSSSVPASFISAAAMSSRADNSIQTVNFSQ---GQITDNNCCSSTERIPRA 180

Query: 210 SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR 269
           SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR
Sbjct: 181 SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR 240

Query: 270 NLSINLASPDFEDHVSICTS 290
           NLSINLASPDFEDH  + +S
Sbjct: 241 NLSINLASPDFEDHKKVLSS 257

[Close]

BLAST of MS000440 vs. NCBI nr
Match: XP_008439279.1 (PREDICTED: protein REVEILLE 6-like isoform X4 [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 2.6e-120
Identity = 228/286 (79.72%), Postives = 251/286 (87.76%), Query Frame = 0


Query: 5   QLQTAIL-EARVRAAPCRRIQIGSVQMALPFDTATTSSREDLWKRARKPYTITKCRESWT 64
           QLQTAI     +R +P     +GS++MALPF++ TTSSR+DL KRARKPYTITKCRESWT
Sbjct: 5   QLQTAIFSNLPLRLSP----DVGSLRMALPFESVTTSSRDDLSKRARKPYTITKCRESWT 64

Query: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124
           EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR
Sbjct: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124

Query: 125 KAAHPYPQKASKNALALVSGSFQSSSVEPKYILKPDSSSVPASFISAAAMSSRADNSIQA 184
           KAAHPYPQKASKN +ALV+  FQSSSVEPKY +KPDSSS PASFISA AMSSRADNSIQ 
Sbjct: 125 KAAHPYPQKASKNGVALVTVPFQSSSVEPKYNIKPDSSSAPASFISATAMSSRADNSIQT 184

Query: 185 VNFSQGARGQITDNNCCSSTERIPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFD 244
           VNFSQGARGQ+ +NNC SST+R  R  FPTKS IEE NN QLRVLPDFGQVYNFIGSVFD
Sbjct: 185 VNFSQGARGQVIENNCSSSTDRTTRTRFPTKSSIEEHNNLQLRVLPDFGQVYNFIGSVFD 244

Query: 245 PEATDHLQRLKKMDPIDVETVLLLMRNLSINLASPDFEDHVSICTS 290
           P+A++HL+RL++MD IDVETVLLLMRNL+INL S DFEDH  + +S
Sbjct: 245 PKASNHLKRLEQMDQIDVETVLLLMRNLAINLTSSDFEDHKRVLSS 286

[Close]

BLAST of MS000440 vs. NCBI nr
Match: XP_008439278.1 (PREDICTED: protein REVEILLE 6-like isoform X3 [Cucumis melo])

HSP 1 Score: 437.6 bits (1124), Expect = 8.5e-119
Identity = 228/288 (79.17%), Postives = 251/288 (87.15%), Query Frame = 0


Query: 5   QLQTAIL-EARVRAAPCRRIQIGSVQMALPFDTATTSSREDLWKRARKPYTITKCRESWT 64
           QLQTAI     +R +P     +GS++MALPF++ TTSSR+DL KRARKPYTITKCRESWT
Sbjct: 5   QLQTAIFSNLPLRLSP----DVGSLRMALPFESVTTSSRDDLSKRARKPYTITKCRESWT 64

Query: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124
           EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR
Sbjct: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124

Query: 125 KAAHPYPQKASKN--ALALVSGSFQSSSVEPKYILKPDSSSVPASFISAAAMSSRADNSI 184
           KAAHPYPQKASKN   +ALV+  FQSSSVEPKY +KPDSSS PASFISA AMSSRADNSI
Sbjct: 125 KAAHPYPQKASKNVSGVALVTVPFQSSSVEPKYNIKPDSSSAPASFISATAMSSRADNSI 184

Query: 185 QAVNFSQGARGQITDNNCCSSTERIPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSV 244
           Q VNFSQGARGQ+ +NNC SST+R  R  FPTKS IEE NN QLRVLPDFGQVYNFIGSV
Sbjct: 185 QTVNFSQGARGQVIENNCSSSTDRTTRTRFPTKSSIEEHNNLQLRVLPDFGQVYNFIGSV 244

Query: 245 FDPEATDHLQRLKKMDPIDVETVLLLMRNLSINLASPDFEDHVSICTS 290
           FDP+A++HL+RL++MD IDVETVLLLMRNL+INL S DFEDH  + +S
Sbjct: 245 FDPKASNHLKRLEQMDQIDVETVLLLMRNLAINLTSSDFEDHKRVLSS 288

[Close]

BLAST of MS000440 vs. NCBI nr
Match: XP_008439277.1 (PREDICTED: protein REVEILLE 6-like isoform X2 [Cucumis melo])

HSP 1 Score: 435.6 bits (1119), Expect = 3.2e-118
Identity = 228/293 (77.82%), Postives = 251/293 (85.67%), Query Frame = 0


Query: 5   QLQTAIL-EARVRAAPCRRIQIGSVQMALPFDTATTSSREDLWKRARKPYTITKCRESWT 64
           QLQTAI     +R +P     +GS++MALPF++ TTSSR+DL KRARKPYTITKCRESWT
Sbjct: 5   QLQTAIFSNLPLRLSP----DVGSLRMALPFESVTTSSRDDLSKRARKPYTITKCRESWT 64

Query: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124
           EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR
Sbjct: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124

Query: 125 KAAHPYPQKASKNALALVSGSFQSSSVEPKYILKPDSSSVPASFISAAAMSSRADNSIQA 184
           KAAHPYPQKASKN +ALV+  FQSSSVEPKY +KPDSSS PASFISA AMSSRADNSIQ 
Sbjct: 125 KAAHPYPQKASKNGVALVTVPFQSSSVEPKYNIKPDSSSAPASFISATAMSSRADNSIQT 184

Query: 185 VNFSQGARG-------QITDNNCCSSTERIPRASFPTKSIIEEQNNHQLRVLPDFGQVYN 244
           VNFSQGARG       Q+ +NNC SST+R  R  FPTKS IEE NN QLRVLPDFGQVYN
Sbjct: 185 VNFSQGARGLNCEITRQVIENNCSSSTDRTTRTRFPTKSSIEEHNNLQLRVLPDFGQVYN 244

Query: 245 FIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNLSINLASPDFEDHVSICTS 290
           FIGSVFDP+A++HL+RL++MD IDVETVLLLMRNL+INL S DFEDH  + +S
Sbjct: 245 FIGSVFDPKASNHLKRLEQMDQIDVETVLLLMRNLAINLTSSDFEDHKRVLSS 293

[Close]

BLAST of MS000440 vs. ExPASy Swiss-Prot
Match: Q8H0W3 (Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.9e-85
Identity = 167/254 (65.75%), Postives = 198/254 (77.95%), Query Frame = 0


Query: 39  TSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRS 98
           +SS EDL K+ RKPYTITK RESWTEPEHDKFLEA+QLFDRDWKKIEAF+GSKTVIQIRS
Sbjct: 52  SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRS 111

Query: 99  HAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSSV--EPKYIL 158
           HAQKYFLKV+KSGTGEHLPPPRPKRKAAHPYPQKA KN    V GSF+S+S   +P ++ 
Sbjct: 112 HAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKNVQLQVPGSFKSTSEPNDPSFMF 171

Query: 159 KPDSSSVPASFISAAAMSSRADNSIQAVNFSQGAR-GQITDNNCCSSTERIPRASFPTKS 218
           +P+SSS+  +  + AA +   +N+ Q ++F+   + G   +NNC SS+E  PR      +
Sbjct: 172 RPESSSMLMTSPTTAAAAPWTNNA-QTISFTPLPKAGAGANNNCSSSSENTPRPRSNRDA 231

Query: 219 IIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNLSINL 278
                  H LRVLPDF QVY FIGSVFDP A++HLQ+LKKMDPIDVETVLLLMRNLSINL
Sbjct: 232 RDHGNVGHSLRVLPDFAQVYGFIGSVFDPYASNHLQKLKKMDPIDVETVLLLMRNLSINL 291

Query: 279 ASPDFEDHVSICTS 290
           +SPDFEDH  + +S
Sbjct: 292 SSPDFEDHRRLLSS 304

[Close]

BLAST of MS000440 vs. ExPASy Swiss-Prot
Match: C0SVG5 (Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.6e-65
Identity = 139/264 (52.65%), Postives = 174/264 (65.91%), Query Frame = 0


Query: 36  TATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 95
           T+T S  ED   + RKPYTI K RE+WT+ EHDKFLEA+ LFDRDWKKIEAFVGSKTV+Q
Sbjct: 36  TSTVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQ 95

Query: 96  IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKN-ALALVSGSFQSSSVEPKY 155
           IRSHAQKYFLKV+KSG  EHLPPPRPKRKA+HPYP KA KN A   +  S     +EP Y
Sbjct: 96  IRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIKAPKNVAYTSLPSSSTLPLLEPGY 155

Query: 156 ILKPDSSSVPASFISAAAMSSRADNS--------IQAVNFSQGARGQITDNNC-CSSTER 215
           +   DS S+  +    A+ SS  ++         I+       A   + +N C    TER
Sbjct: 156 LYSSDSKSLMGNQAVCASTSSSWNHESTNLPKPVIEVEEPGVSATAPLPNNRCRQEDTER 215

Query: 216 IPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVL 275
           +   + P     EE      RV+P+F +VY+FIGSVFDP  + HLQRLK+MDPI++ETVL
Sbjct: 216 VRAVTKPNN---EESCEKPHRVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVL 275

Query: 276 LLMRNLSINLASPDFEDHVSICTS 290
           LLM+NLS+NL SP+F +   + +S
Sbjct: 276 LLMQNLSVNLTSPEFAEQRRLISS 296

[Close]

BLAST of MS000440 vs. ExPASy Swiss-Prot
Match: Q6R0H0 (Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-63
Identity = 135/254 (53.15%), Postives = 168/254 (66.14%), Query Frame = 0


Query: 38  TTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIR 97
           T S  ED  K+ RKPYTITK RE+WTE EHDKFLEA+ LFDRDWKKI+AFVGSKTVIQIR
Sbjct: 40  TMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIR 99

Query: 98  SHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSSVEPKYILK 157
           SHAQKYFLKV+K+GT EHLPPPRPKRKA HPYPQKA K  L+  +  FQ       Y+  
Sbjct: 100 SHAQKYFLKVQKNGTKEHLPPPRPKRKANHPYPQKAPKFTLSSSNALFQHD-----YLYN 159

Query: 158 PDSSSVPASFISAAAMSSRADNSIQAVNFSQGARGQITDNNCC--SSTERIPRASFPTKS 217
            +S  V ++      +          +    G        NCC  SS+    R    T++
Sbjct: 160 TNSHPVISTTRKHGLVHCDVSIPSSVIKEEFG-----VSENCCSTSSSRDKQRTRIVTET 219

Query: 218 IIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNLSINL 277
             +E      RV P+F +VYNFIGSVFDP+ T H++RLK+MDPI++ETVLLLM+NLS+NL
Sbjct: 220 NDQESCGKPHRVAPNFAEVYNFIGSVFDPKTTGHVKRLKEMDPINLETVLLLMKNLSVNL 279

Query: 278 ASPDFEDHVSICTS 290
            SP+F++   + +S
Sbjct: 280 TSPEFDEQRKLISS 283

[Close]

BLAST of MS000440 vs. ExPASy Swiss-Prot
Match: Q8RWU3 (Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.8e-62
Identity = 143/260 (55.00%), Postives = 172/260 (66.15%), Query Frame = 0


Query: 33  PFDTATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKT 92
           P  T+T +  E   K+ RKPYTITK RESWTE EHDKFLEA+QLFDRDWKKIE FVGSKT
Sbjct: 17  PPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKT 76

Query: 93  VIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNAL--ALVSGSFQS--S 152
           VIQIRSHAQKYFLKV+K+GT  H+PPPRPKRKAAHPYPQKASKNA     VS SF +  +
Sbjct: 77  VIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMPLQVSTSFTTTRN 136

Query: 153 SVEPKYILKPDSSSVPASFIS-----AAAMSSRAD-NSIQAVNFSQ-GARGQITDNNCCS 212
              P Y    D+S +    IS     A    + AD  S   +N S     G  + +   S
Sbjct: 137 GDMPGYASWDDASMLLNRVISPQHELATLRGAEADIGSKGLLNVSSPSTSGMGSSSRTVS 196

Query: 213 STERIPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDV 272
            +E + +A  P            L  +PDF +VYNFIGSVFDPE   H+++LK+MDPI+ 
Sbjct: 197 GSEIVRKAKQPP----------VLHGVPDFAEVYNFIGSVFDPETRGHVEKLKEMDPINF 256

Query: 273 ETVLLLMRNLSINLASPDFE 282
           ETVLLLMRNL++NL++PD E
Sbjct: 257 ETVLLLMRNLTVNLSNPDLE 266

[Close]

BLAST of MS000440 vs. ExPASy Swiss-Prot
Match: Q6R0G4 (Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-60
Identity = 134/250 (53.60%), Postives = 172/250 (68.80%), Query Frame = 0


Query: 37  ATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQI 96
           ATT + E   K+ RK YTITK RESWTE EHDKFLEA+QLFDRDWKKIE FVGSKTVIQI
Sbjct: 26  ATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQI 85

Query: 97  RSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNA-LAL-VSGSFQSS-SVEPK 156
           RSHAQKYFLKV+K+GT  H+PPPRPKRKAAHPYPQKASKNA ++L VS SF +  +  P 
Sbjct: 86  RSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNLPG 145

Query: 157 YILKPDSSSVPASFISAAAMSSRAD-NSIQAVNFSQGARGQITDNN-CCSSTERIPRASF 216
           Y    D +S   +   +  +    + +++       G+   I++ +   S      R   
Sbjct: 146 YTPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVDVGSNDMISETSPSASGIGSSSRTLS 205

Query: 217 PTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNL 276
            +K +   +    +  LPDF +VYNFIGSVFDP++   +++LK+MDPI+ ETVLLLMRNL
Sbjct: 206 DSKGLRLAKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNL 265

Query: 277 SINLASPDFE 282
           ++NL++PDFE
Sbjct: 266 TVNLSNPDFE 275

[Close]

BLAST of MS000440 vs. ExPASy TrEMBL
Match: A0A6J1CJ93 (protein REVEILLE 6-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011499 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.1e-139
Identity = 253/260 (97.31%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 30  MALPFDTATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 89
           MALPFDTATTSSREDLWKRARKPYTITKCRESWTEP+HDKFLEAIQLFDRDWKKIEAFVG
Sbjct: 1   MALPFDTATTSSREDLWKRARKPYTITKCRESWTEPQHDKFLEAIQLFDRDWKKIEAFVG 60

Query: 90  SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS 149
           SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS
Sbjct: 61  SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS 120

Query: 150 VEPKYILKPDSSSVPASFISAAAMSSRADNSIQAVNFSQGARGQITDNNCCSSTERIPRA 209
           VEPKYILKPDSSSVPASFISAAAMSSRADNSIQ VNFSQGARGQITDNNCCSSTERIPRA
Sbjct: 121 VEPKYILKPDSSSVPASFISAAAMSSRADNSIQTVNFSQGARGQITDNNCCSSTERIPRA 180

Query: 210 SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR 269
           SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR
Sbjct: 181 SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR 240

Query: 270 NLSINLASPDFEDHVSICTS 290
           NLSINLASPDFEDH  + +S
Sbjct: 241 NLSINLASPDFEDHKKVLSS 260

[Close]

BLAST of MS000440 vs. ExPASy TrEMBL
Match: A0A6J1CHA5 (protein REVEILLE 6-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011499 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.7e-136
Identity = 250/260 (96.15%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 30  MALPFDTATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 89
           MALPFDTATTSSREDLWKRARKPYTITKCRESWTEP+HDKFLEAIQLFDRDWKKIEAFVG
Sbjct: 1   MALPFDTATTSSREDLWKRARKPYTITKCRESWTEPQHDKFLEAIQLFDRDWKKIEAFVG 60

Query: 90  SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS 149
           SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS
Sbjct: 61  SKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSS 120

Query: 150 VEPKYILKPDSSSVPASFISAAAMSSRADNSIQAVNFSQGARGQITDNNCCSSTERIPRA 209
           VEPKYILKPDSSSVPASFISAAAMSSRADNSIQ VNFSQ   GQITDNNCCSSTERIPRA
Sbjct: 121 VEPKYILKPDSSSVPASFISAAAMSSRADNSIQTVNFSQ---GQITDNNCCSSTERIPRA 180

Query: 210 SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR 269
           SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR
Sbjct: 181 SFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMR 240

Query: 270 NLSINLASPDFEDHVSICTS 290
           NLSINLASPDFEDH  + +S
Sbjct: 241 NLSINLASPDFEDHKKVLSS 257

[Close]

BLAST of MS000440 vs. ExPASy TrEMBL
Match: A0A1S3AZ30 (protein REVEILLE 6-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.3e-120
Identity = 228/286 (79.72%), Postives = 251/286 (87.76%), Query Frame = 0


Query: 5   QLQTAIL-EARVRAAPCRRIQIGSVQMALPFDTATTSSREDLWKRARKPYTITKCRESWT 64
           QLQTAI     +R +P     +GS++MALPF++ TTSSR+DL KRARKPYTITKCRESWT
Sbjct: 5   QLQTAIFSNLPLRLSP----DVGSLRMALPFESVTTSSRDDLSKRARKPYTITKCRESWT 64

Query: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124
           EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR
Sbjct: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124

Query: 125 KAAHPYPQKASKNALALVSGSFQSSSVEPKYILKPDSSSVPASFISAAAMSSRADNSIQA 184
           KAAHPYPQKASKN +ALV+  FQSSSVEPKY +KPDSSS PASFISA AMSSRADNSIQ 
Sbjct: 125 KAAHPYPQKASKNGVALVTVPFQSSSVEPKYNIKPDSSSAPASFISATAMSSRADNSIQT 184

Query: 185 VNFSQGARGQITDNNCCSSTERIPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFD 244
           VNFSQGARGQ+ +NNC SST+R  R  FPTKS IEE NN QLRVLPDFGQVYNFIGSVFD
Sbjct: 185 VNFSQGARGQVIENNCSSSTDRTTRTRFPTKSSIEEHNNLQLRVLPDFGQVYNFIGSVFD 244

Query: 245 PEATDHLQRLKKMDPIDVETVLLLMRNLSINLASPDFEDHVSICTS 290
           P+A++HL+RL++MD IDVETVLLLMRNL+INL S DFEDH  + +S
Sbjct: 245 PKASNHLKRLEQMDQIDVETVLLLMRNLAINLTSSDFEDHKRVLSS 286

[Close]

BLAST of MS000440 vs. ExPASy TrEMBL
Match: A0A1S3AYE0 (protein REVEILLE 6-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 4.1e-119
Identity = 228/288 (79.17%), Postives = 251/288 (87.15%), Query Frame = 0


Query: 5   QLQTAIL-EARVRAAPCRRIQIGSVQMALPFDTATTSSREDLWKRARKPYTITKCRESWT 64
           QLQTAI     +R +P     +GS++MALPF++ TTSSR+DL KRARKPYTITKCRESWT
Sbjct: 5   QLQTAIFSNLPLRLSP----DVGSLRMALPFESVTTSSRDDLSKRARKPYTITKCRESWT 64

Query: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124
           EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR
Sbjct: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124

Query: 125 KAAHPYPQKASKN--ALALVSGSFQSSSVEPKYILKPDSSSVPASFISAAAMSSRADNSI 184
           KAAHPYPQKASKN   +ALV+  FQSSSVEPKY +KPDSSS PASFISA AMSSRADNSI
Sbjct: 125 KAAHPYPQKASKNVSGVALVTVPFQSSSVEPKYNIKPDSSSAPASFISATAMSSRADNSI 184

Query: 185 QAVNFSQGARGQITDNNCCSSTERIPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSV 244
           Q VNFSQGARGQ+ +NNC SST+R  R  FPTKS IEE NN QLRVLPDFGQVYNFIGSV
Sbjct: 185 QTVNFSQGARGQVIENNCSSSTDRTTRTRFPTKSSIEEHNNLQLRVLPDFGQVYNFIGSV 244

Query: 245 FDPEATDHLQRLKKMDPIDVETVLLLMRNLSINLASPDFEDHVSICTS 290
           FDP+A++HL+RL++MD IDVETVLLLMRNL+INL S DFEDH  + +S
Sbjct: 245 FDPKASNHLKRLEQMDQIDVETVLLLMRNLAINLTSSDFEDHKRVLSS 288

[Close]

BLAST of MS000440 vs. ExPASy TrEMBL
Match: A0A1S3AYG1 (protein REVEILLE 6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.6e-118
Identity = 228/293 (77.82%), Postives = 251/293 (85.67%), Query Frame = 0


Query: 5   QLQTAIL-EARVRAAPCRRIQIGSVQMALPFDTATTSSREDLWKRARKPYTITKCRESWT 64
           QLQTAI     +R +P     +GS++MALPF++ TTSSR+DL KRARKPYTITKCRESWT
Sbjct: 5   QLQTAIFSNLPLRLSP----DVGSLRMALPFESVTTSSRDDLSKRARKPYTITKCRESWT 64

Query: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124
           EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR
Sbjct: 65  EPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVEKSGTGEHLPPPRPKR 124

Query: 125 KAAHPYPQKASKNALALVSGSFQSSSVEPKYILKPDSSSVPASFISAAAMSSRADNSIQA 184
           KAAHPYPQKASKN +ALV+  FQSSSVEPKY +KPDSSS PASFISA AMSSRADNSIQ 
Sbjct: 125 KAAHPYPQKASKNGVALVTVPFQSSSVEPKYNIKPDSSSAPASFISATAMSSRADNSIQT 184

Query: 185 VNFSQGARG-------QITDNNCCSSTERIPRASFPTKSIIEEQNNHQLRVLPDFGQVYN 244
           VNFSQGARG       Q+ +NNC SST+R  R  FPTKS IEE NN QLRVLPDFGQVYN
Sbjct: 185 VNFSQGARGLNCEITRQVIENNCSSSTDRTTRTRFPTKSSIEEHNNLQLRVLPDFGQVYN 244

Query: 245 FIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNLSINLASPDFEDHVSICTS 290
           FIGSVFDP+A++HL+RL++MD IDVETVLLLMRNL+INL S DFEDH  + +S
Sbjct: 245 FIGSVFDPKASNHLKRLEQMDQIDVETVLLLMRNLAINLTSSDFEDHKRVLSS 293

[Close]

BLAST of MS000440 vs. TAIR 10
Match: AT5G52660.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 321.2 bits (822), Expect = 8.3e-88
Identity = 167/253 (66.01%), Postives = 198/253 (78.26%), Query Frame = 0


Query: 39  TSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRS 98
           +SS EDL K+ RKPYTITK RESWTEPEHDKFLEA+QLFDRDWKKIEAF+GSKTVIQIRS
Sbjct: 52  SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRS 111

Query: 99  HAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSSV--EPKYIL 158
           HAQKYFLKV+KSGTGEHLPPPRPKRKAAHPYPQKA KN    V GSF+S+S   +P ++ 
Sbjct: 112 HAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKNVQLQVPGSFKSTSEPNDPSFMF 171

Query: 159 KPDSSSVPASFISAAAMSSRADNSIQAVNFSQGARGQITDNNCCSSTERIPRASFPTKSI 218
           +P+SSS+  +  + AA +   +N+ Q ++F+   +G   +NNC SS+E  PR      + 
Sbjct: 172 RPESSSMLMTSPTTAAAAPWTNNA-QTISFTPLPKGAGANNNCSSSSENTPRPRSNRDAR 231

Query: 219 IEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNLSINLA 278
                 H LRVLPDF QVY FIGSVFDP A++HLQ+LKKMDPIDVETVLLLMRNLSINL+
Sbjct: 232 DHGNVGHSLRVLPDFAQVYGFIGSVFDPYASNHLQKLKKMDPIDVETVLLLMRNLSINLS 291

Query: 279 SPDFEDHVSICTS 290
           SPDFEDH  + +S
Sbjct: 292 SPDFEDHRRLLSS 303

[Close]

BLAST of MS000440 vs. TAIR 10
Match: AT5G52660.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 316.6 bits (810), Expect = 2.0e-86
Identity = 167/254 (65.75%), Postives = 198/254 (77.95%), Query Frame = 0


Query: 39  TSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIRS 98
           +SS EDL K+ RKPYTITK RESWTEPEHDKFLEA+QLFDRDWKKIEAF+GSKTVIQIRS
Sbjct: 52  SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRS 111

Query: 99  HAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSSV--EPKYIL 158
           HAQKYFLKV+KSGTGEHLPPPRPKRKAAHPYPQKA KN    V GSF+S+S   +P ++ 
Sbjct: 112 HAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKNVQLQVPGSFKSTSEPNDPSFMF 171

Query: 159 KPDSSSVPASFISAAAMSSRADNSIQAVNFSQGAR-GQITDNNCCSSTERIPRASFPTKS 218
           +P+SSS+  +  + AA +   +N+ Q ++F+   + G   +NNC SS+E  PR      +
Sbjct: 172 RPESSSMLMTSPTTAAAAPWTNNA-QTISFTPLPKAGAGANNNCSSSSENTPRPRSNRDA 231

Query: 219 IIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNLSINL 278
                  H LRVLPDF QVY FIGSVFDP A++HLQ+LKKMDPIDVETVLLLMRNLSINL
Sbjct: 232 RDHGNVGHSLRVLPDFAQVYGFIGSVFDPYASNHLQKLKKMDPIDVETVLLLMRNLSINL 291

Query: 279 ASPDFEDHVSICTS 290
           +SPDFEDH  + +S
Sbjct: 292 SSPDFEDHRRLLSS 304

[Close]

BLAST of MS000440 vs. TAIR 10
Match: AT4G01280.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 4.0e-66
Identity = 139/264 (52.65%), Postives = 174/264 (65.91%), Query Frame = 0


Query: 36  TATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 95
           T+T S  ED   + RKPYTI K RE+WT+ EHDKFLEA+ LFDRDWKKIEAFVGSKTV+Q
Sbjct: 36  TSTVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQ 95

Query: 96  IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKN-ALALVSGSFQSSSVEPKY 155
           IRSHAQKYFLKV+KSG  EHLPPPRPKRKA+HPYP KA KN A   +  S     +EP Y
Sbjct: 96  IRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIKAPKNVAYTSLPSSSTLPLLEPGY 155

Query: 156 ILKPDSSSVPASFISAAAMSSRADNS--------IQAVNFSQGARGQITDNNC-CSSTER 215
           +   DS S+  +    A+ SS  ++         I+       A   + +N C    TER
Sbjct: 156 LYSSDSKSLMGNQAVCASTSSSWNHESTNLPKPVIEVEEPGVSATAPLPNNRCRQEDTER 215

Query: 216 IPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVL 275
           +   + P     EE      RV+P+F +VY+FIGSVFDP  + HLQRLK+MDPI++ETVL
Sbjct: 216 VRAVTKPNN---EESCEKPHRVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVL 275

Query: 276 LLMRNLSINLASPDFEDHVSICTS 290
           LLM+NLS+NL SP+F +   + +S
Sbjct: 276 LLMQNLSVNLTSPEFAEQRRLISS 296

[Close]

BLAST of MS000440 vs. TAIR 10
Match: AT4G01280.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 248.1 bits (632), Expect = 8.9e-66
Identity = 139/265 (52.45%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 36  TATTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 95
           T+T S  ED   + RKPYTI K RE+WT+ EHDKFLEA+ LFDRDWKKIEAFVGSKTV+Q
Sbjct: 36  TSTVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQ 95

Query: 96  IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKN-ALALVSGSFQSSSVEPKY 155
           IRSHAQKYFLKV+KSG  EHLPPPRPKRKA+HPYP KA KN A   +  S     +EP Y
Sbjct: 96  IRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIKAPKNVAYTSLPSSSTLPLLEPGY 155

Query: 156 ILKPDSSSVPASFISAAAMSSRADNSIQAVNFSQ---------GARGQITDNNC-CSSTE 215
           +   DS S+  +    A+ SS  ++  ++ N  +          A   + +N C    TE
Sbjct: 156 LYSSDSKSLMGNQAVCASTSSSWNH--ESTNLPKPVIEEEPGVSATAPLPNNRCRQEDTE 215

Query: 216 RIPRASFPTKSIIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETV 275
           R+   + P     EE      RV+P+F +VY+FIGSVFDP  + HLQRLK+MDPI++ETV
Sbjct: 216 RVRAVTKPNN---EESCEKPHRVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETV 275

Query: 276 LLLMRNLSINLASPDFEDHVSICTS 290
           LLLM+NLS+NL SP+F +   + +S
Sbjct: 276 LLLMQNLSVNLTSPEFAEQRRLISS 295

[Close]

BLAST of MS000440 vs. TAIR 10
Match: AT1G01520.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 244.6 bits (623), Expect = 9.9e-65
Identity = 135/254 (53.15%), Postives = 168/254 (66.14%), Query Frame = 0


Query: 38  TTSSREDLWKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQIR 97
           T S  ED  K+ RKPYTITK RE+WTE EHDKFLEA+ LFDRDWKKI+AFVGSKTVIQIR
Sbjct: 40  TMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIR 99

Query: 98  SHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKNALALVSGSFQSSSVEPKYILK 157
           SHAQKYFLKV+K+GT EHLPPPRPKRKA HPYPQKA K  L+  +  FQ       Y+  
Sbjct: 100 SHAQKYFLKVQKNGTKEHLPPPRPKRKANHPYPQKAPKFTLSSSNALFQHD-----YLYN 159

Query: 158 PDSSSVPASFISAAAMSSRADNSIQAVNFSQGARGQITDNNCC--SSTERIPRASFPTKS 217
            +S  V ++      +          +    G        NCC  SS+    R    T++
Sbjct: 160 TNSHPVISTTRKHGLVHCDVSIPSSVIKEEFG-----VSENCCSTSSSRDKQRTRIVTET 219

Query: 218 IIEEQNNHQLRVLPDFGQVYNFIGSVFDPEATDHLQRLKKMDPIDVETVLLLMRNLSINL 277
             +E      RV P+F +VYNFIGSVFDP+ T H++RLK+MDPI++ETVLLLM+NLS+NL
Sbjct: 220 NDQESCGKPHRVAPNFAEVYNFIGSVFDPKTTGHVKRLKEMDPINLETVLLLMKNLSVNL 279

Query: 278 ASPDFEDHVSICTS 290
            SP+F++   + +S
Sbjct: 280 TSPEFDEQRKLISS 283

The following BLAST results are available for this feature:

BLAST of MS000440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140978.1	4.3e-139	97.31	protein REVEILLE 6-like isoform X1 [Momordica charantia]	[more]
XP_022140979.1	7.7e-136	96.15	protein REVEILLE 6-like isoform X2 [Momordica charantia]	[more]
XP_008439279.1	2.6e-120	79.72	PREDICTED: protein REVEILLE 6-like isoform X4 [Cucumis melo]	[more]
XP_008439278.1	8.5e-119	79.17	PREDICTED: protein REVEILLE 6-like isoform X3 [Cucumis melo]	[more]
XP_008439277.1	3.2e-118	77.82	PREDICTED: protein REVEILLE 6-like isoform X2 [Cucumis melo]	[more]

BLAST of MS000440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0W3	2.9e-85	65.75	Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1	[more]
C0SVG5	5.6e-65	52.65	Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1	[more]
Q6R0H0	1.4e-63	53.15	Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1	[more]
Q8RWU3	5.8e-62	55.00	Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1	[more]
Q6R0G4	1.9e-60	53.60	Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1	[more]

BLAST of MS000440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJ93	2.1e-139	97.31	protein REVEILLE 6-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101149...	[more]
A0A6J1CHA5	3.7e-136	96.15	protein REVEILLE 6-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11101149...	[more]
A0A1S3AZ30	1.3e-120	79.72	protein REVEILLE 6-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 ...	[more]
A0A1S3AYE0	4.1e-119	79.17	protein REVEILLE 6-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 ...	[more]
A0A1S3AYG1	1.6e-118	77.82	protein REVEILLE 6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 ...	[more]

BLAST of MS000440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52660.1	8.3e-88	66.01	Homeodomain-like superfamily protein	[more]
AT5G52660.2	2.0e-86	65.75	Homeodomain-like superfamily protein	[more]
AT4G01280.2	4.0e-66	52.65	Homeodomain-like superfamily protein	[more]
AT4G01280.1	8.9e-66	52.45	Homeodomain-like superfamily protein	[more]
AT1G01520.1	9.9e-65	53.15	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 58..106 e-value: 5.8E-10 score: 49.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 59..104 score: 6.016631
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 61..104 e-value: 2.54426E-8 score: 47.185
None	No IPR available	GENE3D	1.10.10.60		coord: 62..109 e-value: 2.0E-16 score: 61.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..131
None	No IPR available	PANTHER	PTHR12802:SF103	PROTEIN REVEILLE 6	coord: 35..286
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 35..286
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 57..106 e-value: 2.7E-18 score: 64.0
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 59..103 e-value: 1.9E-10 score: 40.8
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 54..108 score: 13.286735
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 60..108 score: 11.0006
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 53..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000440.1	MS000440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding