MS000426 (gene) Bitter gourd (TR) v1

Overview


Name	MS000426
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein PATRONUS 1-like
Location	scaffold44: 1621503 .. 1622463 (+)
RNA-Seq Expression	MS000426
Synteny	MS000426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTGTTACAGGGAAGGCAAATGCCATCAATTTGTTAAGAAAAAGTGGGCTTAGTGGGCGAAAGCCCCTCGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACCAGTCATCAAAATGGCAGACCCCAAAGAATATCAAGTTTATTGATGAAGAAGCTGGCGCAGGCAAAAAGAAAAACATTCTGGAGGGCTCTGAGAGGGTGCAGAAGAAGGGTTCTCGAAAAGTGCTTTCCGATATTTCAAACTCTGGGAAGCCAAACCTTCACGAGGCCTCAAAGAAGAAGCAGAACTTGAAGTTGAGCACCGTGAGGGAAAACTCTCCTCATCACAATGCTATTTGCGAGGAACGATTTCTGCACAACCATCGAGAATGCATTAAAGTACAAAATTACTCTATCGACAAGGATCATTTTCTGAGCATCGTTGGACTTGGTATGGTAGTAAAGTTGACGGCATCTACTTGACAATGTTCACTTTTATTTATGTTTCTTGAAACCTTTACTCATTATCTTTTACTTCTTCTTGTCAAAGATCTCCCCAAAGAGTTGACATCCCCTAAAAAGGTCAGTTTCCCCCACTTCTCTCTAGTTCTTTGCTAATACTGTTAAATCACCAATGATATTATAAATCGGGAAGAATGACATTATAGTGTTCTTGACCTCCTGCCCTTTTAGCCCGATACACTATGTTAAACCCAAAAGTTTCAGGCTAATTAATCATTAATTAGATTCATTGTGTGGGTTTCAGGCTGATTGTCCATTTAAGCACTGGGGACTGGAGGAGACGATGGAGTGGGCAGTTGCTAATGAGTATCCAAAAAAGTTGTGTCTGTTTGGAAGGGGAAGACTTAATGATTCATCACCGCCGTGCAAATCCCCTAAATCACCTTCGTTGGAGGATCCCTTTTCTCTCTGGAAGGATAGGGATAGTATCAATTTCACATTGATAAAGACACCA

mRNA sequence

TCCTCTGTTACAGGGAAGGCAAATGCCATCAATTTGTTAAGAAAAAGTGGGCTTAGTGGGCGAAAGCCCCTCGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACCAGTCATCAAAATGGCAGACCCCAAAGAATATCAAGTTTATTGATGAAGAAGCTGGCGCAGGCAAAAAGAAAAACATTCTGGAGGGCTCTGAGAGGGTGCAGAAGAAGGGTTCTCGAAAAGTGCTTTCCGATATTTCAAACTCTGGGAAGCCAAACCTTCACGAGGCCTCAAAGAAGAAGCAGAACTTGAAGTTGAGCACCGTGAGGGAAAACTCTCCTCATCACAATGCTATTTGCGAGGAACGATTTCTGCACAACCATCGAGAATGCATTAAAGTACAAAATTACTCTATCGACAAGGATCATTTTCTGAGCATCGTTGGACTTGATTCATTGTGTGGGTTTCAGGCTGATTGTCCATTTAAGCACTGGGGACTGGAGGAGACGATGGAGTGGGCAGTTGCTAATGAGTATCCAAAAAAGTTGTGTCTGTTTGGAAGGGGAAGACTTAATGATTCATCACCGCCGTGCAAATCCCCTAAATCACCTTCGTTGGAGGATCCCTTTTCTCTCTGGAAGGATAGGGATAGTATCAATTTCACATTGATAAAGACACCA

Coding sequence (CDS)

TCCTCTGTTACAGGGAAGGCAAATGCCATCAATTTGTTAAGAAAAAGTGGGCTTAGTGGGCGAAAGCCCCTCGGCGATCTATCAAATTCAAGAAAGCCAGTCTTAAACCAGTCATCAAAATGGCAGACCCCAAAGAATATCAAGTTTATTGATGAAGAAGCTGGCGCAGGCAAAAAGAAAAACATTCTGGAGGGCTCTGAGAGGGTGCAGAAGAAGGGTTCTCGAAAAGTGCTTTCCGATATTTCAAACTCTGGGAAGCCAAACCTTCACGAGGCCTCAAAGAAGAAGCAGAACTTGAAGTTGAGCACCGTGAGGGAAAACTCTCCTCATCACAATGCTATTTGCGAGGAACGATTTCTGCACAACCATCGAGAATGCATTAAAGTACAAAATTACTCTATCGACAAGGATCATTTTCTGAGCATCGTTGGACTTGATTCATTGTGTGGGTTTCAGGCTGATTGTCCATTTAAGCACTGGGGACTGGAGGAGACGATGGAGTGGGCAGTTGCTAATGAGTATCCAAAAAAGTTGTGTCTGTTTGGAAGGGGAAGACTTAATGATTCATCACCGCCGTGCAAATCCCCTAAATCACCTTCGTTGGAGGATCCCTTTTCTCTCTGGAAGGATAGGGATAGTATCAATTTCACATTGATAAAGACACCA

Protein sequence

SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKKNILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFLHNHRECIKVQNYSIDKDHFLSIVGLDSLCGFQADCPFKHWGLEETMEWAVANEYPKKLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP

Homology

[Close]

BLAST of MS000426 vs. NCBI nr
Match: XP_022140909.1 (uncharacterized protein LOC111011459 [Momordica charantia])

HSP 1 Score: 430.6 bits (1106), Expect = 8.0e-117
Identity = 215/226 (95.13%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 60
           SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK
Sbjct: 23  SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 82

Query: 61  NILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL 120
           NILEGSERVQK GSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL
Sbjct: 83  NILEGSERVQKTGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL 142

Query: 121 HNHRECIKVQNYSIDKDHFLSIVGLD----SLCGFQADCPFKHWGLEETMEWAVANEYPK 180
           HNHRECIKVQNYSIDKDHFLSIVGLD         +ADCPFKHWGLEETMEWAVANEYPK
Sbjct: 143 HNHRECIKVQNYSIDKDHFLSIVGLDLPKELTSPKKADCPFKHWGLEETMEWAVANEYPK 202

Query: 181 KLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP 223
           KLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP
Sbjct: 203 KLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP 248

[Close]

BLAST of MS000426 vs. NCBI nr
Match: XP_022968637.1 (uncharacterized protein LOC111467798 [Cucurbita maxima])

HSP 1 Score: 300.1 bits (767), Expect = 1.6e-77
Identity = 162/222 (72.97%), Postives = 179/222 (80.63%), Query Frame = 0


Query: 2   SVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKKN 61
           SV GK NA+N  RKSG+SGRKPLGDLSNSRKPVLNQS KWQ  KN+ FIDEE   GKKKN
Sbjct: 24  SVAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQSLKWQNTKNLTFIDEENCEGKKKN 83

Query: 62  ILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFLH 121
            L+GSERVQ KG+RKVLSDISNSGKPNL EASKKKQNLKLSTVRE   HHN+ICEERFLH
Sbjct: 84  TLKGSERVQ-KGTRKVLSDISNSGKPNLQEASKKKQNLKLSTVREELIHHNSICEERFLH 143

Query: 122 NHRECIKVQNYSIDKDHFLSIVGLDSLCGFQAD-CPFKHWGLEETMEWAVANEYPKKLCL 181
           NH+ECIK +  +++KD FLSIVGLD     + D  P     L+ET EW + ++ PKKL L
Sbjct: 144 NHQECIKARKCAVEKDQFLSIVGLDLPKKLKMDRKPDSPLKLKETAEWEIFDQSPKKLRL 203

Query: 182 FGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP 223
           FGRGRL DSSPPCKSPKSPS+ D FSLWKD DSINFTLIKTP
Sbjct: 204 FGRGRL-DSSPPCKSPKSPSV-DTFSLWKDSDSINFTLIKTP 242

[Close]

BLAST of MS000426 vs. NCBI nr
Match: XP_022984982.1 (protein PATRONUS 1-like [Cucurbita maxima])

HSP 1 Score: 297.7 bits (761), Expect = 8.1e-77
Identity = 166/227 (73.13%), Postives = 180/227 (79.30%), Query Frame = 0


Query: 1   SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 60
           S+V GKANA+N  RKSGLSGRKPLGDLSNSRKP LNQSSKWQ  KN+ FIDEE GAGKKK
Sbjct: 23  SAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQSSKWQNTKNLTFIDEETGAGKKK 82

Query: 61  NILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL 120
           NIL+GSE+VQ KG+RKVLSDISNSG PNL EASKKKQ LKLSTVRE S HHNAICEERFL
Sbjct: 83  NILKGSEKVQ-KGTRKVLSDISNSGMPNLPEASKKKQKLKLSTVREESLHHNAICEERFL 142

Query: 121 HNHRECIKVQNYSIDKDHFLSIVGLD------SLCGFQADCPFKHWGLEETMEWAVANEY 180
           HNH++CIK QN ++DKD FLSIVGLD      +    + D P K   L E  E AV +  
Sbjct: 143 HNHQDCIKSQNSAMDKDQFLSIVGLDLPNELMTSTRRKPDSPLK---LMEMAELAVVDRS 202

Query: 181 PKKLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKT 222
           PKKLCLFGRG    SSPPCKSPKSPS+ D FSLWKD DSINFTLIKT
Sbjct: 203 PKKLCLFGRG-WPASSPPCKSPKSPSV-DTFSLWKDTDSINFTLIKT 243

[Close]

BLAST of MS000426 vs. NCBI nr
Match: XP_023552407.1 (uncharacterized protein LOC111810077 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023552408.1 uncharacterized protein LOC111810077 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-76
Identity = 168/250 (67.20%), Postives = 182/250 (72.80%), Query Frame = 0


Query: 1   SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 60
           S+V GKAN +N  RKSGLSGRKPLGDLSNSRKP LNQSSKW+  KN+ FIDEE GAGKKK
Sbjct: 23  SAVAGKANGMNSQRKSGLSGRKPLGDLSNSRKPDLNQSSKWKNTKNLTFIDEETGAGKKK 82

Query: 61  NILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL 120
           NIL+GSE+VQ KG+RKVLSDISNSG PNL EASKKKQ LKLSTVRE S HHNAICEERFL
Sbjct: 83  NILKGSEKVQ-KGTRKVLSDISNSGMPNLPEASKKKQKLKLSTVREESLHHNAICEERFL 142

Query: 121 HNHRECIKVQNYSIDKDHFLSIVGLD----------------------------SLCGFQ 180
           HNH++CIK QN ++DKD FLSIVGLD                            +  GFQ
Sbjct: 143 HNHQDCIKSQNSAMDKDQFLSIVGLDLPKELMTSTRRKVSFDDIPLVPKSHNQLAFSGFQ 202

Query: 181 ADCPFKHWGLEETMEWAVANEYPKKLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRD 223
            D P K   L E  E AV +  PKKLCLFGRG   DSSPPCKSPKS S+ D FSLWKD D
Sbjct: 203 PDSPLK---LMEMAELAVVDRSPKKLCLFGRG-WPDSSPPCKSPKSRSV-DTFSLWKDTD 262

[Close]

BLAST of MS000426 vs. NCBI nr
Match: XP_023552405.1 (uncharacterized protein LOC111810077 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-76
Identity = 168/250 (67.20%), Postives = 182/250 (72.80%), Query Frame = 0


Query: 1   SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 60
           S+V GKAN +N  RKSGLSGRKPLGDLSNSRKP LNQSSKW+  KN+ FIDEE GAGKKK
Sbjct: 63  SAVAGKANGMNSQRKSGLSGRKPLGDLSNSRKPDLNQSSKWKNTKNLTFIDEETGAGKKK 122

Query: 61  NILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL 120
           NIL+GSE+VQ KG+RKVLSDISNSG PNL EASKKKQ LKLSTVRE S HHNAICEERFL
Sbjct: 123 NILKGSEKVQ-KGTRKVLSDISNSGMPNLPEASKKKQKLKLSTVREESLHHNAICEERFL 182

Query: 121 HNHRECIKVQNYSIDKDHFLSIVGLD----------------------------SLCGFQ 180
           HNH++CIK QN ++DKD FLSIVGLD                            +  GFQ
Sbjct: 183 HNHQDCIKSQNSAMDKDQFLSIVGLDLPKELMTSTRRKVSFDDIPLVPKSHNQLAFSGFQ 242

Query: 181 ADCPFKHWGLEETMEWAVANEYPKKLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRD 223
            D P K   L E  E AV +  PKKLCLFGRG   DSSPPCKSPKS S+ D FSLWKD D
Sbjct: 243 PDSPLK---LMEMAELAVVDRSPKKLCLFGRG-WPDSSPPCKSPKSRSV-DTFSLWKDTD 302

[Close]

BLAST of MS000426 vs. ExPASy TrEMBL
Match: A0A6J1CH35 (uncharacterized protein LOC111011459 OS=Momordica charantia OX=3673 GN=LOC111011459 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.9e-117
Identity = 215/226 (95.13%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 60
           SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK
Sbjct: 23  SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 82

Query: 61  NILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL 120
           NILEGSERVQK GSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL
Sbjct: 83  NILEGSERVQKTGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL 142

Query: 121 HNHRECIKVQNYSIDKDHFLSIVGLD----SLCGFQADCPFKHWGLEETMEWAVANEYPK 180
           HNHRECIKVQNYSIDKDHFLSIVGLD         +ADCPFKHWGLEETMEWAVANEYPK
Sbjct: 143 HNHRECIKVQNYSIDKDHFLSIVGLDLPKELTSPKKADCPFKHWGLEETMEWAVANEYPK 202

Query: 181 KLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP 223
           KLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP
Sbjct: 203 KLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP 248

[Close]

BLAST of MS000426 vs. ExPASy TrEMBL
Match: A0A6J1HU23 (uncharacterized protein LOC111467798 OS=Cucurbita maxima OX=3661 GN=LOC111467798 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.9e-78
Identity = 162/222 (72.97%), Postives = 179/222 (80.63%), Query Frame = 0


Query: 2   SVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKKN 61
           SV GK NA+N  RKSG+SGRKPLGDLSNSRKPVLNQS KWQ  KN+ FIDEE   GKKKN
Sbjct: 24  SVAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQSLKWQNTKNLTFIDEENCEGKKKN 83

Query: 62  ILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFLH 121
            L+GSERVQ KG+RKVLSDISNSGKPNL EASKKKQNLKLSTVRE   HHN+ICEERFLH
Sbjct: 84  TLKGSERVQ-KGTRKVLSDISNSGKPNLQEASKKKQNLKLSTVREELIHHNSICEERFLH 143

Query: 122 NHRECIKVQNYSIDKDHFLSIVGLDSLCGFQAD-CPFKHWGLEETMEWAVANEYPKKLCL 181
           NH+ECIK +  +++KD FLSIVGLD     + D  P     L+ET EW + ++ PKKL L
Sbjct: 144 NHQECIKARKCAVEKDQFLSIVGLDLPKKLKMDRKPDSPLKLKETAEWEIFDQSPKKLRL 203

Query: 182 FGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP 223
           FGRGRL DSSPPCKSPKSPS+ D FSLWKD DSINFTLIKTP
Sbjct: 204 FGRGRL-DSSPPCKSPKSPSV-DTFSLWKDSDSINFTLIKTP 242

[Close]

BLAST of MS000426 vs. ExPASy TrEMBL
Match: A0A6J1J3M1 (protein PATRONUS 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483088 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.9e-77
Identity = 166/227 (73.13%), Postives = 180/227 (79.30%), Query Frame = 0


Query: 1   SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 60
           S+V GKANA+N  RKSGLSGRKPLGDLSNSRKP LNQSSKWQ  KN+ FIDEE GAGKKK
Sbjct: 23  SAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQSSKWQNTKNLTFIDEETGAGKKK 82

Query: 61  NILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFL 120
           NIL+GSE+VQ KG+RKVLSDISNSG PNL EASKKKQ LKLSTVRE S HHNAICEERFL
Sbjct: 83  NILKGSEKVQ-KGTRKVLSDISNSGMPNLPEASKKKQKLKLSTVREESLHHNAICEERFL 142

Query: 121 HNHRECIKVQNYSIDKDHFLSIVGLD------SLCGFQADCPFKHWGLEETMEWAVANEY 180
           HNH++CIK QN ++DKD FLSIVGLD      +    + D P K   L E  E AV +  
Sbjct: 143 HNHQDCIKSQNSAMDKDQFLSIVGLDLPNELMTSTRRKPDSPLK---LMEMAELAVVDRS 202

Query: 181 PKKLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKT 222
           PKKLCLFGRG    SSPPCKSPKSPS+ D FSLWKD DSINFTLIKT
Sbjct: 203 PKKLCLFGRG-WPASSPPCKSPKSPSV-DTFSLWKDTDSINFTLIKT 243

[Close]

BLAST of MS000426 vs. ExPASy TrEMBL
Match: A0A6J1E4Q0 (protein PATRONUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430755 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 8.7e-77
Identity = 166/229 (72.49%), Postives = 182/229 (79.48%), Query Frame = 0


Query: 1   SSVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKK 60
           S+V GKANA+N  RKSGLSGRKPLGDLSNSRKP LNQSSKWQ  KN+ FIDEE GAGKKK
Sbjct: 23  SAVAGKANAMNSQRKSGLSGRKPLGDLSNSRKPDLNQSSKWQNTKNLTFIDEETGAGKKK 82

Query: 61  NILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSP-HHNAICEERF 120
           NIL+GSE+VQ KG+RKVLSDISNSG PNL EASKKKQ LKLSTVRE S  HHNAICEERF
Sbjct: 83  NILKGSEKVQ-KGTRKVLSDISNSGMPNLPEASKKKQKLKLSTVREESSLHHNAICEERF 142

Query: 121 LHNHRECIKVQNYSIDKDHFLSIVGLD------SLCGFQADCPFKHWGLEETMEWAVANE 180
           LH+H++CIK QN ++DKD FLSIVGLD      +    + D P K   L E  E AV + 
Sbjct: 143 LHDHQDCIKSQNSAMDKDQFLSIVGLDLPKELMTSTRRKPDSPLK---LMEMAELAVVDR 202

Query: 181 YPKKLCLFGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP 223
            PKKLCLFGRG   DSSPPCKSPKSPS+ D FSLWKD D+INFTLIKTP
Sbjct: 203 SPKKLCLFGRG-WPDSSPPCKSPKSPSV-DTFSLWKDTDNINFTLIKTP 245

[Close]

BLAST of MS000426 vs. ExPASy TrEMBL
Match: A0A6J1FZF9 (uncharacterized protein LOC111449317 OS=Cucurbita moschata OX=3662 GN=LOC111449317 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.7e-70
Identity = 153/222 (68.92%), Postives = 171/222 (77.03%), Query Frame = 0


Query: 2   SVTGKANAINLLRKSGLSGRKPLGDLSNSRKPVLNQSSKWQTPKNIKFIDEEAGAGKKKN 61
           S  GK NA+N  RKSG+SGRKPLGDLSNSRKPVLNQS KWQ  KN+ F+DEE   GKKKN
Sbjct: 24  SGAGKGNAMNSQRKSGVSGRKPLGDLSNSRKPVLNQSLKWQNTKNLTFLDEENCVGKKKN 83

Query: 62  ILEGSERVQKKGSRKVLSDISNSGKPNLHEASKKKQNLKLSTVRENSPHHNAICEERFLH 121
            L+GSERVQ KG+RK LSDISNSGKPNL EASKKKQNLKLSTVRE   H     +ERFLH
Sbjct: 84  TLKGSERVQ-KGTRKALSDISNSGKPNLQEASKKKQNLKLSTVREELIH-----QERFLH 143

Query: 122 NHRECIKVQNYSIDKDHFLSIVGLDSLCGFQAD-CPFKHWGLEETMEWAVANEYPKKLCL 181
           NH+ECIK +  +++KD FLSIVGLD     + D  P     L+E  E  + ++ PKKLCL
Sbjct: 144 NHQECIKARKCAVEKDQFLSIVGLDLPKELKMDRKPDSPLKLKEMAELEIFDQSPKKLCL 203

Query: 182 FGRGRLNDSSPPCKSPKSPSLEDPFSLWKDRDSINFTLIKTP 223
           FGRGRL DSSPPCKSPKSPS+ D FSLWKD DSINFTLIKTP
Sbjct: 204 FGRGRL-DSSPPCKSPKSPSV-DTFSLWKDSDSINFTLIKTP 237

The following BLAST results are available for this feature:

BLAST of MS000426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140909.1	8.0e-117	95.13	uncharacterized protein LOC111011459 [Momordica charantia]	[more]
XP_022968637.1	1.6e-77	72.97	uncharacterized protein LOC111467798 [Cucurbita maxima]	[more]
XP_022984982.1	8.1e-77	73.13	protein PATRONUS 1-like [Cucurbita maxima]	[more]
XP_023552407.1	1.1e-76	67.20	uncharacterized protein LOC111810077 isoform X3 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023552405.1	1.1e-76	67.20	uncharacterized protein LOC111810077 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS000426 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS000426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CH35	3.9e-117	95.13	uncharacterized protein LOC111011459 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1HU23	7.9e-78	72.97	uncharacterized protein LOC111467798 OS=Cucurbita maxima OX=3661 GN=LOC111467798...	[more]
A0A6J1J3M1	3.9e-77	73.13	protein PATRONUS 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483088 PE=4 SV=1	[more]
A0A6J1E4Q0	8.7e-77	72.49	protein PATRONUS 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430755 PE=4 SV=1	[more]
A0A6J1FZF9	2.7e-70	68.92	uncharacterized protein LOC111449317 OS=Cucurbita moschata OX=3662 GN=LOC1114493...	[more]

BLAST of MS000426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	PANTHER	PTHR35125:SF2	NEURON NAVIGATOR 1-LIKE	coord: 2..222
IPR039326	Protein Patronus	PANTHER	PTHR35125	NEURON NAVIGATOR 1-LIKE-RELATED	coord: 2..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000426.1	MS000426.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007346	regulation of mitotic cell cycle