MS000420 (gene) Bitter gourd (TR) v1

Overview


Name	MS000420
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	sec-independent protein translocase protein TATB, chloroplastic-like
Location	scaffold44: 1595826 .. 1599396 (+)
RNA-Seq Expression	MS000420
Synteny	MS000420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCAAAAGTTTCAGTTACCACATTCCCATTTTCTCCATCTCCCTCATCTGCTTGCTCTAGAGTTGCAGCTTCCACTTCATCTTCCTCGCCCATCTTATTTCCAAAAACCCCCAAAATTCGTCTCTCCTTGTGTAATTTCCCACTGGGTCTCGGGCTTTTCTCTCCATGGACTGGTTTAAAGCATCTGGGTATCTCAACCAGAGCAAAGTTTCTCGGTATATATGTAATTTCTGATGATCTCAGTTTTGTACGATTGATTCAATTTGTGTTTCAAATTTGTTTGAATTGAGTTTTTTATTGATCTTTTTTCTTTTATGTTCTCTAAAATGGCGTTGTTGCAGAGAGGAGGAGGAGAATTCCTAAGGGGAAGGCAGTTTTTGCATCTCTGTTTGGGGTTGGAGCTCCCGAGGCGTTGGTTATTGGAGTAGTGGCTCTGTTAGTTTTTGGTCCAAAGGGTCTAGCTGAGGTGAGTTATATAGAGCATGTAGATGACATAAAATTTTGTGATACTTGGCTTCCGTAGATGTGTTTCTCTTGTTTTTACATTTTAGCTTGTGCTAAATCTGAAAATTTAAGTGTTCTGCCCATATTTGCCTGGATAAAAATCGTCAAGAACCTTGTTGTTTCTATTGTTAAATGAATTCTTAATAATGGCAAAAGGTGCCCCATTATTCCAAGGGTAGAATTTTTTTCAGCAATTGTATTTTATCTGACATCTAATGGGACTTTTCGATTTTGAAGTTGTTGCTGTTGTTCAAAGTTTGAGACAGCAGCATTATAACATCAGTTATTTTAGTTATTTACTGTCTTGAGCCATTGTGAGTGGAATAAGTTGGTCGTATCTTGTCGATGTCAAGAAAGGTAGCTCCTAATTTTATTGAAAGTGTGTTAGGGGAAAGGACTAAATTACGGTGTAAATAATGGGATGTATTAGGTGGGGCTTTTCTAACCCAGTTAGTTAGTAACTGAAAGAGGCGCCTGTATAAAGAAGTATATAGGAATCCTAATGAAAGAAGGGGGGTTTATGCTTATCTTTTGGTAAGTTTGGAGTTATGGAAGAATAAGGAACTCTTAAATTTTCCTTTGCGTTGTATCTAAAAGGATTCTCTCAGTTATATCTTATATTGTGTTGTATTTGAAGTGCTGAGAAGCAAGATGACTAGCATTTTTCCTTTTGTGGCTGGCGAGTGTTATGTAAAGAGGCAAGTATGGCAAAAAATCTGGAGATTGGACGATAAATTATTGCAAAGTTTATGTTTTCAGTTTATTCATAGCTTAGACACAGAGGGCGGGGCTGGCATGGAGATCTACATCATGAAGTGCGTGTGGGTGAAGCATAAGGGACTGCTTGACCTTGTTTATGCAGTAAGAAGCTTGGGAATTTAGAATATGGTTATTACGAAATTTTGGTTGAGTTAGTTGCAAGGTCCATGGGGAAATGCTGATAGTGAACTCTTTTCTATTTCTCCATATTTCTTTCATTGTGCTTCTGGAATTGAATAATCCTAAGTTTATACAGTGGCAATCAAACCATTTAAAGTTGTACAGTCAATGCTAGAACATTTGATATACTTCAAAACTTACAAGAACACTGCCCCATTACCAGTGATACTTGATATGATTTTAAACACCTTGGTTATTGGAATGGAGAATTTGTTTGTTTCTTCCTCGAGGGTCTTGTTCAAGTGGAATTATATAACCAAAAAGGGAAGGCATAGGCTGCCTCATAGGTGTTACTCGTGGTGCACGTTCGTTTTGATAAACCTCAATATTAGTGGTTCTCTTTGAGTATTGACCCATAAGGGGTGCTGTTTCCTTGAAGCTGTGAAGGATAAGCTCGTAGATGCTTATTGATAGGTGGCCTGCAGAAAGGTAATAACAGCTTCAAATTTTCTGGATCAGACAATATGAAGTTAGGAAATTGATATGTTAATCTTATTTAGCATCCATTGTTGCAAATGGAGATGGGAGTCATGGAGATTCCCAGAATTGCTCAAATGAATGCATGTTGTAAGAAGATTAGAAGCTAGTGATTTTTGTTGATATCCTAGTTTCAAGAGGTCAAAGATTTTAATTGTTTTCCACCTCAATGCTTGAACCAGAACTGTGAGGAACTTCCCATACATCCGAAGCCGTTACCACTCGGTCTACCCCATATTTGAGAATGTGGAACTTTGCTCAATGCCAACACGGATTATGGGTGAAAGGCTATTTGTAAATCATCTTTCTTTGGTGTTTTCTACTTCTGGATATTAGTAATCCCAAGCTTTGACCTGTTTCTGTGTTACAAAAACTCTTACCGTAGGTTGAGTTACCTACGATATTCATAACTTGGGATGGACAATGCTACGAAGTTTAGGCTTGGTAGAACAGAGATTTTTATCTATCTAGTAGGATGTGTTCTAAGATAAAGTTGATAACCTGAAAACACATTAGGAACAAGTTCTGTTTTTGTGCTTGTTGAAGAAAAGTTCATTACTGTTTTGTCAAACTCTTGGGAAGATCTGCAATACATGTATCAACAAGTATTTTTTCTGGACTGAAATTTAGTTGCTGTAACTTATTTATACGAAGGTTGCTCGGAATCTGGGGAAGACCTTACGTGCATTTCAACCTACTATAAGAGAACTTCAGGTAGTTATATTTCGGTTTTTGAAAATTTCCACTTGCAACTTCTCGGAAACCCTCTAATTGTTTTTGTCTGTAGGACGTTTCTAGAGAATTCAAAACCACACTTGAGCGCGAAATTGGCCTCGATGAAATTTCAAATTCGGTTGATGGCTCATACAATTCAAGCAGATCCAGTACCTACCCAAACCCGCCTTCTGTTCCTAAAGCAGAAGATCCTGTTGCAGTAGCTGAACCCAGTGAGTGGTTAAGTTATTCATTATCCAAGTTCTTATTTGTTATCAGTACTCTTATTTTTAAGGAAAGATTTCAAAGGTACAGTAGAATACTAAACGCTTTGAAAACTTAAAACAAAAATGCAAAATTGTTGTCAAACAGAACCTTAATAATTTGAAGAGATCAATGCTTTTAATTTGGTCGATGTCAAGGGAATGGATGAGAAGATTTTAGTTGCAATATTATCAAAGGGCAGTTATATTCAACAGGTTACAATTTTAGTAAAATCAGAAAGGAAAATTATGGAACATCTTCCCGATACTCGATATGATCTGTGTTCTATTTCATCATCTGTCGTCTCGATTATGATATGAATTCCATATTTATATAACAGCAGACGGTTCTCCATCAGAAAGCAAAGCATATACCTCTGAAGAGTACCTAAAGGTTACAGAGGAGCAGCTGAAAGCTCAAGAGCAGGTCCAAACCAATCTTGCAGCAGAAAGCCAGAGTGGATCTCAAGTAGAGGCTCAAGGTTGCTAAAACCAAATCACTTCCTCTCTCTCTCTCTCTCAATCTATCTCTCTCTCATATATGAATTTGTGACAGGAGTGGCTGAAGAACCTGCCACGGCAGCGACTGGACCCCGGAATCTTGGAACAGGTGAGTCTGAAGAATCTGCTACCTCAGCTTCGGGTCCTCAGAGTCCTGGAACTGAGGCG

mRNA sequence

ATGGCGTCAAAAGTTTCAGTTACCACATTCCCATTTTCTCCATCTCCCTCATCTGCTTGCTCTAGAGTTGCAGCTTCCACTTCATCTTCCTCGCCCATCTTATTTCCAAAAACCCCCAAAATTCGTCTCTCCTTGTGTAATTTCCCACTGGGTCTCGGGCTTTTCTCTCCATGGACTGGTTTAAAGCATCTGGGTATCTCAACCAGAGCAAAGTTTCTCGAGAGGAGGAGGAGAATTCCTAAGGGGAAGGCAGTTTTTGCATCTCTGTTTGGGGTTGGAGCTCCCGAGGCGTTGGTTATTGGAGTAGTGGCTCTGTTAGTTTTTGGTCCAAAGGGTCTAGCTGAGGTTGCTCGGAATCTGGGGAAGACCTTACGTGCATTTCAACCTACTATAAGAGAACTTCAGGACGTTTCTAGAGAATTCAAAACCACACTTGAGCGCGAAATTGGCCTCGATGAAATTTCAAATTCGGTTGATGGCTCATACAATTCAAGCAGATCCAGTACCTACCCAAACCCGCCTTCTGTTCCTAAAGCAGAAGATCCTGTTGCAGTAGCTGAACCCACAGACGGTTCTCCATCAGAAAGCAAAGCATATACCTCTGAAGAGTACCTAAAGGTTACAGAGGAGCAGCTGAAAGCTCAAGAGCAGGTCCAAACCAATCTTGCAGCAGAAAGCCAGAGTGGATCTCAAGTAGAGGCTCAAGGAGTGGCTGAAGAACCTGCCACGGCAGCGACTGGACCCCGGAATCTTGGAACAGGTGAGTCTGAAGAATCTGCTACCTCAGCTTCGGGTCCTCAGAGTCCTGGAACTGAGGCG

Coding sequence (CDS)

ATGGCGTCAAAAGTTTCAGTTACCACATTCCCATTTTCTCCATCTCCCTCATCTGCTTGCTCTAGAGTTGCAGCTTCCACTTCATCTTCCTCGCCCATCTTATTTCCAAAAACCCCCAAAATTCGTCTCTCCTTGTGTAATTTCCCACTGGGTCTCGGGCTTTTCTCTCCATGGACTGGTTTAAAGCATCTGGGTATCTCAACCAGAGCAAAGTTTCTCGAGAGGAGGAGGAGAATTCCTAAGGGGAAGGCAGTTTTTGCATCTCTGTTTGGGGTTGGAGCTCCCGAGGCGTTGGTTATTGGAGTAGTGGCTCTGTTAGTTTTTGGTCCAAAGGGTCTAGCTGAGGTTGCTCGGAATCTGGGGAAGACCTTACGTGCATTTCAACCTACTATAAGAGAACTTCAGGACGTTTCTAGAGAATTCAAAACCACACTTGAGCGCGAAATTGGCCTCGATGAAATTTCAAATTCGGTTGATGGCTCATACAATTCAAGCAGATCCAGTACCTACCCAAACCCGCCTTCTGTTCCTAAAGCAGAAGATCCTGTTGCAGTAGCTGAACCCACAGACGGTTCTCCATCAGAAAGCAAAGCATATACCTCTGAAGAGTACCTAAAGGTTACAGAGGAGCAGCTGAAAGCTCAAGAGCAGGTCCAAACCAATCTTGCAGCAGAAAGCCAGAGTGGATCTCAAGTAGAGGCTCAAGGAGTGGCTGAAGAACCTGCCACGGCAGCGACTGGACCCCGGAATCTTGGAACAGGTGAGTCTGAAGAATCTGCTACCTCAGCTTCGGGTCCTCAGAGTCCTGGAACTGAGGCG

Protein sequence

MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTGLKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAEDPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEEPATAATGPRNLGTGESEESATSASGPQSPGTEA

Homology

[Close]

BLAST of MS000420 vs. NCBI nr
Match: XP_022141177.1 (sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 497.3 bits (1279), Expect = 8.6e-137
Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG
Sbjct: 5   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 64

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 65  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 124

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTY NPPSVPKAE
Sbjct: 125 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPPSVPKAE 184

Query: 181 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 240
           DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE
Sbjct: 185 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 244

Query: 241 PATAATGPRNLGTGESEESATSASGPQSPGTEA 274
           PATAATGPRNLGTGESEESATSASGPQSPGTEA
Sbjct: 245 PATAATGPRNLGTGESEESATSASGPQSPGTEA 277

[Close]

BLAST of MS000420 vs. NCBI nr
Match: XP_022141178.1 (sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 488.8 bits (1257), Expect = 3.0e-134
Identity = 270/273 (98.90%), Postives = 271/273 (99.27%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG
Sbjct: 5   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 64

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 65  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 124

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTY NPPSVPKAE
Sbjct: 125 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPPSVPKAE 184

Query: 181 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 240
           DPVAVAEP +GSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE
Sbjct: 185 DPVAVAEP-NGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 244

Query: 241 PATAATGPRNLGTGESEESATSASGPQSPGTEA 274
           PATAATGPRNLGTGESEESATSASGPQSPGTEA
Sbjct: 245 PATAATGPRNLGTGESEESATSASGPQSPGTEA 276

[Close]

BLAST of MS000420 vs. NCBI nr
Match: XP_022141179.1 (sec-independent protein translocase protein TATB, chloroplastic isoform X3 [Momordica charantia])

HSP 1 Score: 464.9 bits (1195), Expect = 4.7e-127
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG
Sbjct: 5   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 64

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 65  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 124

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTY NPPSVPKAE
Sbjct: 125 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPPSVPKAE 184

Query: 181 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 240
           DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE
Sbjct: 185 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 244

Query: 241 PATAATGPRNLGT 254
           PATAATGPRNLGT
Sbjct: 245 PATAATGPRNLGT 257

[Close]

BLAST of MS000420 vs. NCBI nr
Match: XP_038891745.1 (sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-104
Identity = 219/273 (80.22%), Postives = 239/273 (87.55%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASK SV+TFPFSPS SSACSR A STS SS IL+P+TPK RLSLCNFPLGLGLFSPW G
Sbjct: 34  MASKFSVSTFPFSPSSSSACSRPAPSTSPSSSILYPRTPKFRLSLCNFPLGLGLFSPWNG 93

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGIS   KF ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 94  LKHLGISNGGKFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 153

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKT+LEREIGLDEIS+SV+ SYNSS+ +TY +PP VPKAE
Sbjct: 154 GKTLRAFQPTIRELQDVSREFKTSLEREIGLDEISSSVNSSYNSSKLNTYSDPPPVPKAE 213

Query: 181 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 240
           + VAVAEPTD S S SKAYTSEEYLKVTEEQL AQ+Q+QTN AAESQSGSQV+ +G  EE
Sbjct: 214 ESVAVAEPTDDSSSASKAYTSEEYLKVTEEQLNAQDQLQTNFAAESQSGSQVQPEGTIEE 273

Query: 241 PATAATGPRNLGTGESEESATSASGPQSPGTEA 274
           P TAA   +NLGTG++EES   AS P+ PGTE+
Sbjct: 274 PTTAAPELQNLGTGKAEES--PASVPRPPGTES 304

[Close]

BLAST of MS000420 vs. NCBI nr
Match: XP_038891753.1 (sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 4.7e-103
Identity = 218/273 (79.85%), Postives = 238/273 (87.18%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASK SV+TFPFSPS SSACSR A STS SS IL+P+TPK RLSLCNFPLGLGLFSPW G
Sbjct: 34  MASKFSVSTFPFSPSSSSACSRPAPSTSPSSSILYPRTPKFRLSLCNFPLGLGLFSPWNG 93

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGIS   KF ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 94  LKHLGISNGGKFPERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 153

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKT+LEREIGLDEIS+SV+ SYNSS+ +TY +PP VPKAE
Sbjct: 154 GKTLRAFQPTIRELQDVSREFKTSLEREIGLDEISSSVNSSYNSSKLNTYSDPPPVPKAE 213

Query: 181 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 240
           + VAVAEP D S S SKAYTSEEYLKVTEEQL AQ+Q+QTN AAESQSGSQV+ +G  EE
Sbjct: 214 ESVAVAEPNDSS-SASKAYTSEEYLKVTEEQLNAQDQLQTNFAAESQSGSQVQPEGTIEE 273

Query: 241 PATAATGPRNLGTGESEESATSASGPQSPGTEA 274
           P TAA   +NLGTG++EES   AS P+ PGTE+
Sbjct: 274 PTTAAPELQNLGTGKAEES--PASVPRPPGTES 303

[Close]

BLAST of MS000420 vs. ExPASy Swiss-Prot
Match: Q94G16 (Sec-independent protein translocase protein TATB, chloroplastic OS=Pisum sativum OX=3888 GN=TATB PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 9.1e-49
Identity = 134/262 (51.15%), Postives = 169/262 (64.50%), Query Frame = 0


Query: 23  VAASTSSSSPILFPK--TPKIRLSLCN------------FPLGLGLFSPWTGLKHLGIST 82
           +A ++S+S+ +L PK  T  + LS C             + LG  LF+PW G K LG ST
Sbjct: 5   LAIASSTSTMLLCPKLGTCSMSLSTCTPTSHSKIHHFHLYSLGKRLFTPWNGFKQLGFST 64

Query: 83  RAK-----FLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKT 142
           + K     F+ ++ R  KGK V+ASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKT
Sbjct: 65  KPKKPLFHFIGKKGRC-KGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKT 124

Query: 143 LRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAEDPV 202
           LR FQPTIRE+QDVSREFK+TLEREIG+D+I+N +  +Y+S+  +T P P +     +  
Sbjct: 125 LREFQPTIREIQDVSREFKSTLEREIGIDDITNPLQSTYSSNVRNTTPTPSATEITNNSQ 184

Query: 203 AVAEPTDGSPSESKAYTSEEYLKVTEEQLK---AQEQVQTNLAAESQSGSQVEAQGVAEE 262
              +P +G   ESKAY+SEEYLK+TEEQLK   AQ+Q QT+   E +   Q+  Q  A E
Sbjct: 185 TAVDP-NGKVDESKAYSSEEYLKITEEQLKAVAAQQQEQTSSPKEDEIEQQI--QPPANE 244

[Close]

BLAST of MS000420 vs. ExPASy Swiss-Prot
Match: Q9XH75 (Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATB PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.6e-45
Identity = 138/260 (53.08%), Postives = 160/260 (61.54%), Query Frame = 0


Query: 22  RVAASTSSSSPIL------FP------KTPKIRLSLCNFPLGLGLFSPWTGLKHLGISTR 81
           ++ AS+SSS  I       +P      K  K  LS     LG   FSP+ GLKHLGIS  
Sbjct: 6   QIIASSSSSPTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHLGISIS 65

Query: 82  AKFL--ERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAF 141
            K    E++RR  K   + ASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR F
Sbjct: 66  PKSSNPEKKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTF 125

Query: 142 QPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTY-----PNPPSVPKAEDP 201
           QPTIRELQDVSR+FK+TLEREIGLD+I  S    YN +R++       P PPSVP  E P
Sbjct: 126 QPTIRELQDVSRDFKSTLEREIGLDDI--STPNVYNQNRTNPVQPPPPPPPPSVPSTEAP 185

Query: 202 VAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEEPA 261
           V   +P D      KAYTSE+YLK TEEQLKA         AESQ+  Q + Q    +P 
Sbjct: 186 VTANDPNDS--QSPKAYTSEDYLKFTEEQLKALS------PAESQTEDQTQTQ-EPPQPT 245

Query: 262 TAATGPRNLGTGESEESATS 263
           T  T      TGES+ + T+
Sbjct: 246 TVQT-----PTGESQPNGTA 248

[Close]

BLAST of MS000420 vs. ExPASy Swiss-Prot
Match: Q2R237 (Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATB PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 1.7e-34
Identity = 118/239 (49.37%), Postives = 143/239 (59.83%), Query Frame = 0


Query: 23  VAASTSSSSPILFPKTP---KIRLSLCNFPLGLGLFSPWTGLKHLGISTRAKFLERRRRI 82
           VA  T S SP  FP +    + RL+L      LGL S  +G  H  +  R +  E  +R 
Sbjct: 14  VAMCTPSPSP--FPSSQRRRRRRLTLAQPYCTLGL-SFVSGRHHRFLLRRRRRTE-SKRT 73

Query: 83  PKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSR 142
            +G  V+ASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSR
Sbjct: 74  SRGTGVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSR 133

Query: 143 EFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAEDPVAVAEPTDGSPSESKAY 202
           EF++TLEREIGLDE+  S++             PP++  ++ P A+ + +D  P E+  Y
Sbjct: 134 EFRSTLEREIGLDEVPPSMN-----------YRPPTMNNSQQP-AIDQSSDDKP-EAAPY 193

Query: 203 TSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAE-EPATAATGPRNLGTGESE 258
           TSEE +KVTEEQL A      N   E     Q EA   +E      + G    G   SE
Sbjct: 194 TSEELIKVTEEQLAASAAAAWN-TQEPPPSQQKEAAATSESNDGAISRGSDGAGAAMSE 234

[Close]

BLAST of MS000420 vs. ExPASy Swiss-Prot
Match: O48950 (Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays OX=4577 GN=TATB PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-33
Identity = 103/216 (47.69%), Postives = 126/216 (58.33%), Query Frame = 0


Query: 58  WTGLKHLGISTR--AKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAE 117
           W G++   I TR  + F+    R  +   + ASLFGVGAPEALVIGVVALLVFGPKGLAE
Sbjct: 37  WKGVEWGSIQTRMVSSFVAVGSRTRRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAE 96

Query: 118 VARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPS 177
           VARNLGKTLRAFQPTIRELQDVSREF++TLEREIG+DE+S S +    +  ++  P    
Sbjct: 97  VARNLGKTLRAFQPTIRELQDVSREFRSTLEREIGIDEVSQSTNYRPTTMNNNQQP---- 156

Query: 178 VPKAEDPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQ 237
              A DP    EP          YTSEE +KVTEEQ+ A      N              
Sbjct: 157 ---AADPNVKPEPA--------PYTSEELMKVTEEQIAASAAAAWN-------------- 216

Query: 238 GVAEEPATAATGPRNLGTGESEESATS--ASGPQSP 270
              ++PAT+        T  SE++ TS  + GP +P
Sbjct: 217 --PQQPATSQQQEEAPTTPRSEDAPTSGGSDGPAAP 221

[Close]

BLAST of MS000420 vs. ExPASy Swiss-Prot
Match: Q8DJ44 (Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tatA PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-09
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 88  SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLER 147
           ++FG+G PE +VI VVALL+FGPK L E+ R+LGKT RAF+   RE QD  +     LE 
Sbjct: 2   NVFGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEE 61

Query: 148 E 149
           E
Sbjct: 62  E 62

[Close]

BLAST of MS000420 vs. ExPASy TrEMBL
Match: A0A6J1CJ51 (sec-independent protein translocase protein TATB, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.1e-137
Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG
Sbjct: 5   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 64

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 65  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 124

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTY NPPSVPKAE
Sbjct: 125 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPPSVPKAE 184

Query: 181 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 240
           DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE
Sbjct: 185 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 244

Query: 241 PATAATGPRNLGTGESEESATSASGPQSPGTEA 274
           PATAATGPRNLGTGESEESATSASGPQSPGTEA
Sbjct: 245 PATAATGPRNLGTGESEESATSASGPQSPGTEA 277

[Close]

BLAST of MS000420 vs. ExPASy TrEMBL
Match: A0A6J1CJQ6 (sec-independent protein translocase protein TATB, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.5e-134
Identity = 270/273 (98.90%), Postives = 271/273 (99.27%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG
Sbjct: 5   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 64

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 65  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 124

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTY NPPSVPKAE
Sbjct: 125 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPPSVPKAE 184

Query: 181 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 240
           DPVAVAEP +GSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE
Sbjct: 185 DPVAVAEP-NGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 244

Query: 241 PATAATGPRNLGTGESEESATSASGPQSPGTEA 274
           PATAATGPRNLGTGESEESATSASGPQSPGTEA
Sbjct: 245 PATAATGPRNLGTGESEESATSASGPQSPGTEA 276

[Close]

BLAST of MS000420 vs. ExPASy TrEMBL
Match: A0A6J1CHV3 (sec-independent protein translocase protein TATB, chloroplastic isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.3e-127
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG
Sbjct: 5   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 64

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 65  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 124

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTY NPPSVPKAE
Sbjct: 125 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPPSVPKAE 184

Query: 181 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 240
           DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE
Sbjct: 185 DPVAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEE 244

Query: 241 PATAATGPRNLGT 254
           PATAATGPRNLGT
Sbjct: 245 PATAATGPRNLGT 257

[Close]

BLAST of MS000420 vs. ExPASy TrEMBL
Match: A0A6J1G1A2 (sec-independent protein translocase protein TATB, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449771 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.1e-100
Identity = 214/274 (78.10%), Postives = 233/274 (85.04%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASKVS  TFPFSPS SS+ +      SSS P +  + PKIRLSLCNFPLGL LFSPW+G
Sbjct: 7   MASKVSAATFPFSPSSSSSLA------SSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWSG 66

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTR KF+ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 67  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 126

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIS+SV+  YNSSRS+T+ NPPSV KAE
Sbjct: 127 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPSVSKAE 186

Query: 181 DPVAVAEP--TDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVA 240
           DP AVAEP   D SPS SKAY+SEEYLK+TEEQLK    VQ NLAAES+SGSQ + QG  
Sbjct: 187 DPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLK----VQANLAAESESGSQEQPQGTV 246

Query: 241 EEPATAATGPRNLGTGESEESATSASGPQSPGTE 273
           EEPAT A GP+NLGTG+++ESA SA  PQSPGTE
Sbjct: 247 EEPATIAPGPQNLGTGKADESAASALRPQSPGTE 270

[Close]

BLAST of MS000420 vs. ExPASy TrEMBL
Match: A0A6J1HWX7 (sec-independent protein translocase protein TATB, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467601 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.0e-99
Identity = 213/276 (77.17%), Postives = 234/276 (84.78%), Query Frame = 0


Query: 1   MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGLFSPWTG 60
           MASKVS   FPFSPS SS+ +      SSS P ++ + PKIRLSLCNFPLGL LFSPW+G
Sbjct: 7   MASKVSAAKFPFSPSSSSSLA------SSSLPTIYSRIPKIRLSLCNFPLGLRLFSPWSG 66

Query: 61  LKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGIST  KF+ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 67  LKHLGISTSGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 126

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYPNPPSVPKAE 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIS+SV+  YNSSRS+T+ NPPSV +AE
Sbjct: 127 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPSVSRAE 186

Query: 181 DPVAVAEP--TDGSPSESKAYTSEEYLKVTEEQLKAQEQ--VQTNLAAESQSGSQVEAQG 240
           D  AVAEP   D SPS SKAY+SEEYLK+TEEQLKAQEQ  VQ NLAAES+SGSQ + QG
Sbjct: 187 DSAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKAQEQLKVQANLAAESESGSQEQPQG 246

Query: 241 VAEEPATAATGPRNLGTGESEESATSASGPQSPGTE 273
             EEPAT A GP+NLGT +++ESA SA  PQSPGTE
Sbjct: 247 TVEEPATIAPGPQNLGTSKADESAASAPRPQSPGTE 276

[Close]

BLAST of MS000420 vs. TAIR 10
Match: AT5G52440.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 183.3 bits (464), Expect = 2.5e-46
Identity = 138/260 (53.08%), Postives = 160/260 (61.54%), Query Frame = 0


Query: 22  RVAASTSSSSPIL------FP------KTPKIRLSLCNFPLGLGLFSPWTGLKHLGISTR 81
           ++ AS+SSS  I       +P      K  K  LS     LG   FSP+ GLKHLGIS  
Sbjct: 6   QIIASSSSSPTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHLGISIS 65

Query: 82  AKFL--ERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAF 141
            K    E++RR  K   + ASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLR F
Sbjct: 66  PKSSNPEKKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTF 125

Query: 142 QPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTY-----PNPPSVPKAEDP 201
           QPTIRELQDVSR+FK+TLEREIGLD+I  S    YN +R++       P PPSVP  E P
Sbjct: 126 QPTIRELQDVSRDFKSTLEREIGLDDI--STPNVYNQNRTNPVQPPPPPPPPSVPSTEAP 185

Query: 202 VAVAEPTDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQVEAQGVAEEPA 261
           V   +P D      KAYTSE+YLK TEEQLKA         AESQ+  Q + Q    +P 
Sbjct: 186 VTANDPNDS--QSPKAYTSEDYLKFTEEQLKALS------PAESQTEDQTQTQ-EPPQPT 245

Query: 262 TAATGPRNLGTGESEESATS 263
           T  T      TGES+ + T+
Sbjct: 246 TVQT-----PTGESQPNGTA 248

[Close]

BLAST of MS000420 vs. TAIR 10
Match: AT5G28750.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 53.1 bits (126), Expect = 4.0e-07
Identity = 27/62 (43.55%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 88  SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLER 147
           +LFG+G PE  VI  VA L+FGPK L E+ +++GKT+++FQ   +E +    E KT  E 
Sbjct: 62  ALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFES---ELKTEPEE 120

Query: 148 EI 150
            +
Sbjct: 122 SV 120

The following BLAST results are available for this feature:

BLAST of MS000420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141177.1	8.6e-137	99.63	sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Momo...	[more]
XP_022141178.1	3.0e-134	98.90	sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Momo...	[more]
XP_022141179.1	4.7e-127	99.60	sec-independent protein translocase protein TATB, chloroplastic isoform X3 [Momo...	[more]
XP_038891745.1	1.5e-104	80.22	sec-independent protein translocase protein TATB, chloroplastic isoform X1 [Beni...	[more]
XP_038891753.1	4.7e-103	79.85	sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Beni...	[more]

BLAST of MS000420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G16	9.1e-49	51.15	Sec-independent protein translocase protein TATB, chloroplastic OS=Pisum sativum...	[more]
Q9XH75	3.6e-45	53.08	Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis t...	[more]
Q2R237	1.7e-34	49.37	Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa ...	[more]
O48950	3.1e-33	47.69	Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays OX=4...	[more]
Q8DJ44	1.9e-09	54.10	Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatu...	[more]

BLAST of MS000420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJ51	4.1e-137	99.63	sec-independent protein translocase protein TATB, chloroplastic isoform X1 OS=Mo...	[more]
A0A6J1CJQ6	1.5e-134	98.90	sec-independent protein translocase protein TATB, chloroplastic isoform X2 OS=Mo...	[more]
A0A6J1CHV3	2.3e-127	99.60	sec-independent protein translocase protein TATB, chloroplastic isoform X3 OS=Mo...	[more]
A0A6J1G1A2	3.1e-100	78.10	sec-independent protein translocase protein TATB, chloroplastic-like OS=Cucurbit...	[more]
A0A6J1HWX7	2.0e-99	77.17	sec-independent protein translocase protein TATB, chloroplastic OS=Cucurbita max...	[more]

BLAST of MS000420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52440.1	2.5e-46	53.08	Bacterial sec-independent translocation protein mttA/Hcf106	[more]
AT5G28750.1	4.0e-07	43.55	Bacterial sec-independent translocation protein mttA/Hcf106	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..225
None	No IPR available	PRINTS	PR01506	TATBPROTEIN	coord: 89..109 score: 40.46 coord: 109..128 score: 27.48
None	No IPR available	GENE3D	1.20.5.3310		coord: 89..137 e-value: 8.1E-17 score: 62.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..273
None	No IPR available	PANTHER	PTHR33162:SF3	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC	coord: 1..247
None	No IPR available	PANTHER	PTHR33162	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC	coord: 1..247
IPR003369	Sec-independent protein translocase protein TatA/B/E	PFAM	PF02416	TatA_B_E	coord: 92..142 e-value: 6.2E-24 score: 83.1
IPR006312	Sec-independent protein translocase protein TatA/E	TIGRFAM	TIGR01411	TIGR01411	coord: 91..136 e-value: 6.3E-16 score: 55.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000420.1	MS000420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0043953	protein transport by the Tat complex
cellular_component	GO:0016021	integral component of membrane