MS000340 (gene) Bitter gourd (TR) v1

Overview


Name	MS000340
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP-dependent Clp protease ATP-binding subunit CLPT1
Location	scaffold44: 1018695 .. 1021247 (+)
RNA-Seq Expression	MS000340
Synteny	MS000340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCACTCGCTTGAACTCTCTTTCGCTTTCACAAGTCCCCTTTTCCCTCGCCACCCAATCCAATTGTTACAATTTAGAACACAAAACTCTATTCCTTCCCGTCAGCCCCCTTTTCGAGCTCAAGCTCGCAATTAAGCGTTCTAATGTCACCCAATCCGTCTCCAAGTTCACCCGCCGCGCCACCACTGCCACTGTGTCCTTTAGCCTCCCGGCTACGTACGAATTCTCTTGCCACTCTTGCTTTAGTTACTGATTCTTTTTCAAGCCCTTAATTTTAATTTTAATTTTTTTAATTCTGATTTTGCAGGAAACCCGAGGGCGTTTCCCCTGACAAACTCCCAAAGTAAGTTTACCCACAAATTTTATCCCATCAGTTGGTGTTAATTGGAGTTGTTGTTGGTTGCCTCCATAATGTGTGTAGATTATTTTGTAATTTAGCTAATCTTTTTGCAATTTGTGATGAAGGGTGGTAAATGGTAATTAGGTTGAACTATGACTTTAGTCCTTATTAATAAGTTTTAAGACTTCAATTTTAGTCTTTGAGGGGTGGCCTGTCCGGGAGGTTCGAAATCAATTTTAGGAACTGTGGTTTAAAGGTTGGAATTATTGTGCTTTCGAAACTATTCGCAGATATGTTGAACAATAGCCTAATGTGGCAGATGTGTGTCACCTCTTACTTGCAGCATATCATAGAATGAATTCTTCTTATCTTTCTCTTTTTGGTTGTACGACTTTTTCCCATCTATCTATATTGATTTTCGAGCATGTCAGTATATCACTGCTGTGAACCATTTGTTATATGACTTTTCCTTTTCAGCACATAGATTGTCGATTAATGAAAAAATGATAGTGGTGTTAATTGAGATGATTGTTTGTTGAATTCGTGATGTATAAGATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACCGGAACAGAAGCTTTGCTAATGGGAATTTTAATTGAGGGTTAGTAGCCATTCTATGTCTGGAGATCATTTCTTATTTACATCTATATTTGGATTTGCAAATGAATTCAGCTTAGTTGAATGCATTTAAGTTGCAGAACTATCTGAATCTTGGTCCCTTTTTTTAAACACACTAAAATCAAGATCGTCCTCCAAGGATTCAATATTTGATTATCAATTTCAAAATGTGGCTACATTTCCCCACACCCCTTCCAGCATCATTTCATGATATCTTTCATCGTCATCTGATGTCCCTCGTGCTAAACTACAGTATTGTCTTTGAAAGATTTAATTATGTCAAAAATTCAACATTGAAGCTTATGTTCATGCCAACTTCTGTCAGCTGCTGATACGAGTTGCCTATCTTCAACAGTAGCCTTTGGCCACATGATTTTTTAATATCCTTATGCTGAGTTGCTAACAATATAGATTTTGAAATAAAAAATAAACTAAAGTTGCATATTCCCTGTGATTGCATTGCCTGTGCTTCAATGCTTGATAACTTTTCTTTTCCTTGACATTTATTCGTTCACATTTCTTTCAGGAACCAGCATAGCTGCCAGATTCTTAAGGGCTAATGGAATTACACTGTTCAAAGTAAGAGAAGAAACTGTTAAGCTACTTGGAAAATCCGATATGTACTTCTTCAGCCCAGAGCATCCTCCATTGACCGAACCTGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTAAGATCATTCTTCTTAATCATGCAGCAAATGTGATTCTTTAACTGACCTGAAATTAAGGTGAATGATACTTGAAATTCCTACTGAAACTCAAAGCTGCCGTTGTAAAGAATGGGATGTTAGGATGACAAATTTTTTGACAGCTGGTCAAACCAGATTTTTAGTATTGCCTATTTTCCATGTTCAAACAATGGCCTATTATCAGAGGAAAACGTAAGGGAGGTCATGCGTTTTTTGCCACTGACTCCTTGACAGCTTACGTGGAAAGGAAGTAAATCAGATAAATTTTCCACGGCTAGGATAGTGAATAAACAATTTACGGATTATGCTTACCACATTAGAATAGTGAATAATTGCTTTCTAGGTATGCTTACGGCTTACTGTTTTTGAAAGACTTTTGAAGCTGTGTTGCGTATAGGCAACAAAGACTTTTTTGCAAAGCATTTGTCTTATCATTTAGTAAGAAGCACCCACTTGCAAAGAAGAATTTCACTATTTCGGTTCATCCTAGTATCTAGTTATTCATGAATCATATACAAATGTGCACAAGTATGTGTAGACTTCTTGATTGTAGATATTGACTAAGATTGATTGTGACATATGTGCATTTTAGTATGTACTTTGCTTGTGGCAGTATTCGTTGATTGAACTCGAGGTGTTGTATGTAGGTGAATCTGGGGAAATAACTACAGGTCATTTGCTTCTTGGTATTTGGTCAGAGGAATCTGCAGGTCGCAAGATCTTGGCCACCCTTGGCTTTGATGATGAGAAGGCGAAAGAGATTGAAAAAACTGTAAGTTTTATGTTATTTTCATCTGGG

mRNA sequence

ATGGCGGCCACTCGCTTGAACTCTCTTTCGCTTTCACAAGTCCCCTTTTCCCTCGCCACCCAATCCAATTGTTACAATTTAGAACACAAAACTCTATTCCTTCCCGTCAGCCCCCTTTTCGAGCTCAAGCTCGCAATTAAGCGTTCTAATGTCACCCAATCCGTCTCCAAGTTCACCCGCCGCGCCACCACTGCCACTGTGTCCTTTAGCCTCCCGGCTACGAAACCCGAGGGCGTTTCCCCTGACAAACTCCCAAAATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACCGGAACAGAAGCTTTGCTAATGGGAATTTTAATTGAGGGAACCAGCATAGCTGCCAGATTCTTAAGGGCTAATGGAATTACACTGTTCAAAGTAAGAGAAGAAACTGTTAAGCTACTTGGAAAATCCGATATGTACTTCTTCAGCCCAGAGCATCCTCCATTGACCGAACCTGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTGAATCTGGGGAAATAACTACAGGTCATTTGCTTCTTGGTATTTGGTCAGAGGAATCTGCAGGTCGCAAGATCTTGGCCACCCTTGGCTTTGATGATGAGAAGGCGAAAGAGATTGAAAAAACTGTAAGTTTTATGTTATTTTCATCTGGG

Coding sequence (CDS)

ATGGCGGCCACTCGCTTGAACTCTCTTTCGCTTTCACAAGTCCCCTTTTCCCTCGCCACCCAATCCAATTGTTACAATTTAGAACACAAAACTCTATTCCTTCCCGTCAGCCCCCTTTTCGAGCTCAAGCTCGCAATTAAGCGTTCTAATGTCACCCAATCCGTCTCCAAGTTCACCCGCCGCGCCACCACTGCCACTGTGTCCTTTAGCCTCCCGGCTACGAAACCCGAGGGCGTTTCCCCTGACAAACTCCCAAAATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACCGGAACAGAAGCTTTGCTAATGGGAATTTTAATTGAGGGAACCAGCATAGCTGCCAGATTCTTAAGGGCTAATGGAATTACACTGTTCAAAGTAAGAGAAGAAACTGTTAAGCTACTTGGAAAATCCGATATGTACTTCTTCAGCCCAGAGCATCCTCCATTGACCGAACCTGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTGAATCTGGGGAAATAACTACAGGTCATTTGCTTCTTGGTATTTGGTCAGAGGAATCTGCAGGTCGCAAGATCTTGGCCACCCTTGGCTTTGATGATGAGAAGGCGAAAGAGATTGAAAAAACTGTAAGTTTTATGTTATTTTCATCTGGG

Protein sequence

MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTRRATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTVSFMLFSSG

Homology

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BLAST of MS000340 vs. NCBI nr
Match: XP_022141304.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVT SVSKFTR
Sbjct: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTHSVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEK+V
Sbjct: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKSV 225

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BLAST of MS000340 vs. NCBI nr
Match: KAG6576777.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014811.1 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.1 bits (1032), Expect = 3.2e-108
Identity = 208/225 (92.44%), Postives = 214/225 (95.11%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATR+NSLSLS VPFSL  QSNCY+LE KTLFLP SPL +L LAIKRSN T SVSKFTR
Sbjct: 1   MAATRMNSLSLSLVPFSLPAQSNCYSLEPKTLFLPASPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA+KPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSG+SGEITTGHLLL IWSEESAGRKILATLGFDDEKAKEIEKTV
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTV 225

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BLAST of MS000340 vs. NCBI nr
Match: XP_023552673.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.6 bits (1028), Expect = 9.3e-108
Identity = 207/225 (92.00%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATR+NSLSLS VPFSL  QSNCY+LE KTLFLP SPL +L LAIKRSN T SVSKFTR
Sbjct: 1   MAATRMNSLSLSLVPFSLPAQSNCYSLEPKTLFLPASPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA+KPEGVSPDKLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSG+SGEITTGHLLL IWSEESAGRKILATLGFDDEKAKEIEKTV
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTV 225

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BLAST of MS000340 vs. NCBI nr
Match: XP_022922794.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 397.9 bits (1021), Expect = 6.0e-107
Identity = 207/225 (92.00%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATR+NSLSLS VP SL  QSNCY+LE KTLFLPVSPL +L LAIKRSN T SVSKFTR
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA+KPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSG+SGEITTGHLLL IWSEESAGRKILATLGFD EKAKEIEKTV
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDGEKAKEIEKTV 225

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BLAST of MS000340 vs. NCBI nr
Match: KAA0033572.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] >TYK30329.1 ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 203/225 (90.22%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATRLNSLS SQ+P SL +QSNCY+LEHK L  P++PL ELKLAIKRSN T  VSKFTR
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPA+KPEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSG+SGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEI KTV
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTV 225

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BLAST of MS000340 vs. ExPASy Swiss-Prot
Match: Q93WL3 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT1 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-60
Identity = 113/168 (67.26%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 60  RRATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGI 119
           R  T+A+   ++P  +PE  S DK+PKWSARAIKS AM ELEARKLKYP+TGTEA+LMGI
Sbjct: 59  RCLTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGI 118

Query: 120 LIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEK 179
           L+EGTS  A+FLR NG+TLFKVR+ET+ LLGKSDMYFFSPEHPPLTEPAQ+A+ WA+ EK
Sbjct: 119 LVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEK 178

Query: 180 LKSGESGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEIEKTVS 227
            KS   GE+TT +LLLG+WS+ +SAGR+IL  LGF+++KAKE+EK+++
Sbjct: 179 NKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMN 226

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BLAST of MS000340 vs. ExPASy Swiss-Prot
Match: Q8GW78 (ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT2 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.0e-56
Identity = 120/169 (71.01%), Postives = 134/169 (79.29%), Query Frame = 0


Query: 60  RRATTATVSFSLPATKPEGVSPD-KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMG 119
           RR   + +S SLP   P+ V  D K PKWS RAIKSFAM ELEARKLKYPNTGTEALLMG
Sbjct: 67  RRIHKSAIS-SLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMG 126

Query: 120 ILIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAE 179
           ILIEGTS  ++FLRAN I L+KVREETVKLLGK+DMYFFSPEHPPLTE AQRALD A+ +
Sbjct: 127 ILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQ 186

Query: 180 KLKSGESGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEIEKTVS 227
            LK+G  GE+   H+LLGIWSE ES G KILATLGF DEK+KE+E   S
Sbjct: 187 NLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELESFAS 234

[Close]

BLAST of MS000340 vs. ExPASy Swiss-Prot
Match: P46523 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic (Fragment) OS=Brassica napus OX=3708 GN=CLPA PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 0


Query: 78  GVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGIT 137
           GV      +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI 
Sbjct: 36  GVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGIN 95

Query: 138 LFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGESGEITTGHLLLGI 197
           L   R E  K++G+     F     P T  A+R L+ ++ E  + G +  I + HLLLG+
Sbjct: 96  LKDARVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGL 155

Query: 198 WSE-ESAGRKILATLGFD 215
             E E    ++L  LG D
Sbjct: 156 LREGEGVAARVLENLGAD 170

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BLAST of MS000340 vs. ExPASy Swiss-Prot
Match: Q7F9I1 (Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPC1 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 49/138 (35.51%), Postives = 78/138 (56.52%), Query Frame = 0


Query: 78  GVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGIT 137
           GV      +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI 
Sbjct: 82  GVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGIN 141

Query: 138 LFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGESGEITTGHLLLGI 197
           L   R E  K++G+     F     P T  A+R L+ ++ E  + G +  I + HLLLG+
Sbjct: 142 LKDARVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGL 201

Query: 198 WSE-ESAGRKILATLGFD 215
             E E    ++L +LG D
Sbjct: 202 LREGEGVAARVLESLGAD 216

[Close]

BLAST of MS000340 vs. ExPASy Swiss-Prot
Match: Q2QVG9 (Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPC2 PE=2 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-12
Identity = 55/168 (32.74%), Postives = 90/168 (53.57%), Query Frame = 0


Query: 48  RSNVTQSVSKFTRRATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKY 107
           RS  + SV+  T   +T     S    +   V+     +++ +AIK   +A+ EAR+L +
Sbjct: 53  RSVHSFSVTPVTNFRSTVASYRSRRGRRARFVTRSMFERFTEKAIKVIMLAQEEARRLGH 112

Query: 108 PNTGTEALLMGILIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEP 167
              GTE +L+G++ EGT IAA+ L++ GI L   R E  K++G+ +   F     P T  
Sbjct: 113 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGN--GFVAVEIPFTPR 172

Query: 168 AQRALDWAVAEKLKSGESGEITTGHLLLGIWSE-ESAGRKILATLGFD 215
           A+R L+ ++ E  + G +  I + HLLLG+  E E    ++L +LG D
Sbjct: 173 AKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLESLGAD 217

[Close]

BLAST of MS000340 vs. ExPASy TrEMBL
Match: A0A6J1CI79 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111011733 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVT SVSKFTR
Sbjct: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTHSVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEK+V
Sbjct: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKSV 225

[Close]

BLAST of MS000340 vs. ExPASy TrEMBL
Match: A0A6J1E4F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430678 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.9e-107
Identity = 207/225 (92.00%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATR+NSLSLS VP SL  QSNCY+LE KTLFLPVSPL +L LAIKRSN T SVSKFTR
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA+KPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSG+SGEITTGHLLL IWSEESAGRKILATLGFD EKAKEIEKTV
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDGEKAKEIEKTV 225

[Close]

BLAST of MS000340 vs. ExPASy TrEMBL
Match: A0A5D3E3F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1044G00010 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.5e-107
Identity = 203/225 (90.22%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATRLNSLS SQ+P SL +QSNCY+LEHK L  P++PL ELKLAIKRSN T  VSKFTR
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPA+KPEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSG+SGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEI KTV
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTV 225

[Close]

BLAST of MS000340 vs. ExPASy TrEMBL
Match: A0A1S3AY13 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103484006 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.5e-106
Identity = 202/225 (89.78%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATRLNSLS SQ+P SL +QSNCY+LEHK L  P++PL ELKLAIKRSN T  VSKFTR
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPA+KPEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFS EHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSSEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSG+SGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEI KTV
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTV 225

[Close]

BLAST of MS000340 vs. ExPASy TrEMBL
Match: A0A6J1J1K1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482587 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.2e-106
Identity = 204/225 (90.67%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTQSVSKFTR 60
           MAATR+NSLSLS VP SL  QSNCY+LE KTLFLPVSPL +L LAI+RSN T S+SK TR
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIERSNATHSISKSTR 60

Query: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTA VSFSLPA+KPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTAIVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKTV 226
           KSG+SGEITTGHLLL IWSEESAGRKILATLGFDDEKAKEIEKTV
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTV 225

[Close]

BLAST of MS000340 vs. TAIR 10
Match: AT4G25370.1 (Double Clp-N motif protein )

HSP 1 Score: 234.6 bits (597), Expect = 8.2e-62
Identity = 113/168 (67.26%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 60  RRATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGI 119
           R  T+A+   ++P  +PE  S DK+PKWSARAIKS AM ELEARKLKYP+TGTEA+LMGI
Sbjct: 59  RCLTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGI 118

Query: 120 LIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEK 179
           L+EGTS  A+FLR NG+TLFKVR+ET+ LLGKSDMYFFSPEHPPLTEPAQ+A+ WA+ EK
Sbjct: 119 LVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEK 178

Query: 180 LKSGESGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEIEKTVS 227
            KS   GE+TT +LLLG+WS+ +SAGR+IL  LGF+++KAKE+EK+++
Sbjct: 179 NKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMN 226

[Close]

BLAST of MS000340 vs. TAIR 10
Match: AT4G12060.1 (Double Clp-N motif protein )

HSP 1 Score: 221.5 bits (563), Expect = 7.2e-58
Identity = 120/169 (71.01%), Postives = 134/169 (79.29%), Query Frame = 0


Query: 60  RRATTATVSFSLPATKPEGVSPD-KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMG 119
           RR   + +S SLP   P+ V  D K PKWS RAIKSFAM ELEARKLKYPNTGTEALLMG
Sbjct: 67  RRIHKSAIS-SLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMG 126

Query: 120 ILIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAE 179
           ILIEGTS  ++FLRAN I L+KVREETVKLLGK+DMYFFSPEHPPLTE AQRALD A+ +
Sbjct: 127 ILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQ 186

Query: 180 KLKSGESGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEIEKTVS 227
            LK+G  GE+   H+LLGIWSE ES G KILATLGF DEK+KE+E   S
Sbjct: 187 NLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELESFAS 234

[Close]

BLAST of MS000340 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 )

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-13
Identity = 47/130 (36.15%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 97  RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 156

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGESGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G +  I + HLLLG+  E E   
Sbjct: 157 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVA 216

Query: 206 RKILATLGFD 215
            ++L  LG D
Sbjct: 217 ARVLENLGAD 223

[Close]

BLAST of MS000340 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase )

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-12
Identity = 46/130 (35.38%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +++ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 117 RFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEV 176

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGESGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G +  I + HLLLG+  E E   
Sbjct: 177 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVA 236

Query: 206 RKILATLGFD 215
            ++L  LG D
Sbjct: 237 ARVLENLGAD 243

[Close]

BLAST of MS000340 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase )

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-12
Identity = 46/130 (35.38%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +++ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 86  RFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEV 145

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGESGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G +  I + HLLLG+  E E   
Sbjct: 146 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVA 205

Query: 206 RKILATLGFD 215
            ++L  LG D
Sbjct: 206 ARVLENLGAD 212

The following BLAST results are available for this feature:

BLAST of MS000340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141304.1	4.9e-117	99.11	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momord...	[more]
KAG6576777.1	3.2e-108	92.44	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, partial [Cu...	[more]
XP_023552673.1	9.3e-108	92.00	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurb...	[more]
XP_022922794.1	6.0e-107	92.00	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurb...	[more]
KAA0033572.1	1.3e-106	90.22	ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] ...	[more]

BLAST of MS000340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WL3	1.2e-60	67.26	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidops...	[more]
Q8GW78	1.0e-56	71.01	ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidops...	[more]
P46523	2.0e-12	35.51	ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic (Frag...	[more]
Q7F9I1	2.0e-12	35.51	Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q2QVG9	2.6e-12	32.74	Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of MS000340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CI79	2.4e-117	99.11	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Momo...	[more]
A0A6J1E4F8	2.9e-107	92.00	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]
A0A5D3E3F8	6.5e-107	90.22	ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa...	[more]
A0A1S3AY13	5.5e-106	89.78	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]
A0A6J1J1K1	7.2e-106	90.67	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]

BLAST of MS000340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25370.1	8.2e-62	67.26	Double Clp-N motif protein	[more]
AT4G12060.1	7.2e-58	71.01	Double Clp-N motif protein	[more]
AT5G50920.1	3.2e-13	36.15	CLPC homologue 1	[more]
AT3G48870.1	1.2e-12	35.38	Clp ATPase	[more]
AT3G48870.2	1.2e-12	35.38	Clp ATPase	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004176	Clp, repeat (R) domain	PFAM	PF02861	Clp_N	coord: 186..223 e-value: 4.9E-7 score: 29.8 coord: 98..150 e-value: 4.3E-10 score: 39.5
IPR004176	Clp, repeat (R) domain	PROSITE	PS51903	CLP_R	coord: 84..228 score: 29.685282
IPR036628	Clp, N-terminal domain superfamily	GENE3D	1.10.1780.10		coord: 86..228 e-value: 1.2E-43 score: 150.6
IPR036628	Clp, N-terminal domain superfamily	SUPERFAMILY	81923	Double Clp-N motif	coord: 86..218
None	No IPR available	PANTHER	PTHR47016:SF1	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC	coord: 1..225
IPR044217	ATP-dependent Clp protease ATP-binding subunit CLPT1/2	PANTHER	PTHR47016	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC	coord: 1..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000340.1	MS000340.1	mRNA