Homology
BLAST of MS000273 vs. NCBI nr
Match:
XP_022141093.1 (zinc finger CCCH domain-containing protein 54 isoform X1 [Momordica charantia])
HSP 1 Score: 469.5 bits (1207), Expect = 1.5e-128
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0
Query: 1 MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTE 60
MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTE
Sbjct: 2 MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTE 61
Query: 61 CPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRAC 120
CPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRAC
Sbjct: 62 CPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRAC 121
Query: 121 NAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGL 180
NAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGL
Sbjct: 122 NAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGL 181
Query: 181 KGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ 218
KGLTVREIRERKNDRNFGWEVSDSDLPHIGWI ELLQ
Sbjct: 182 KGLTVREIRERKNDRNFGWEVSDSDLPHIGWIRELLQ 218
BLAST of MS000273 vs. NCBI nr
Match:
XP_022141094.1 (zinc finger CCCH domain-containing protein 54 isoform X2 [Momordica charantia])
HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
Query: 25 MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVA 84
MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVA
Sbjct: 1 MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVA 60
Query: 85 CPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSET 144
CPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSET
Sbjct: 61 CPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSET 120
Query: 145 KQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDS 204
KQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDS
Sbjct: 121 KQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDS 180
Query: 205 DLPHIGWICELLQ 218
DLPHIGWI ELLQ
Sbjct: 181 DLPHIGWIRELLQ 193
BLAST of MS000273 vs. NCBI nr
Match:
XP_038878131.1 (zinc finger CCCH domain-containing protein 54 [Benincasa hispida])
HSP 1 Score: 313.5 bits (802), Expect = 1.4e-81
Identity = 151/218 (69.27%), Postives = 174/218 (79.82%), Query Frame = 0
Query: 1 MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTE 60
MFQGF GIN+ V+ H+FS + +++D A+F SDEFRM+AYKIQRCPR RSHDWTE
Sbjct: 1 MFQGFVFGIND-VYGHEFSAVS--VPEIDD-TAMFSSDEFRMYAYKIQRCPRNRSHDWTE 60
Query: 61 CPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRAC 120
CPYAHRGEKAQRRD RRFNY+AVACPAFR+G+CP+GDFCE+AHGVFEYWLHPARYRTRAC
Sbjct: 61 CPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRAC 120
Query: 121 NAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNI-VNG 180
NAGRFCQRKVCFFAH+P++LR ETKQKF+FNAHR RV V VE+P E K D S I V G
Sbjct: 121 NAGRFCQRKVCFFAHSPKELRPETKQKFNFNAHRQRVAVADVESPSEEKFDGASEIPVRG 180
Query: 181 LKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ 218
G R+ R+FG EVS+ DLPH+ WI ELLQ
Sbjct: 181 TSG-------GREKQRSFGLEVSELDLPHVEWISELLQ 207
BLAST of MS000273 vs. NCBI nr
Match:
XP_008454474.1 (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo] >KAA0044676.1 zinc finger CCCH domain-containing protein 54 [Cucumis melo var. makuwa] >TYK16906.1 zinc finger CCCH domain-containing protein 54 [Cucumis melo var. makuwa])
HSP 1 Score: 311.2 bits (796), Expect = 6.9e-81
Identity = 150/224 (66.96%), Postives = 175/224 (78.12%), Query Frame = 0
Query: 1 MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRT 60
MFQGF GIN+ V+ H+FS L E+V+D AVF +DEFRM++YKIQRCPR
Sbjct: 1 MFQGFVFGIND-VYGHEFSAVSLPEVTVGNLTEKVDD-TAVFSTDEFRMYSYKIQRCPRN 60
Query: 61 RSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPA 120
RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+CP+GDFCE+AHGVFEYWLHPA
Sbjct: 61 RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
Query: 121 RYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDV 180
RYRTRACNAGRFCQRKVCFFAH+PE+LR ETK KF+ NA R RV V AVE+P E KND +
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGI 180
Query: 181 SNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ 218
I G RKN+R+FG++VS+ +LPHI WI ELL+
Sbjct: 181 LEIPARENG------GGRKNERSFGFDVSELELPHIEWISELLK 216
BLAST of MS000273 vs. NCBI nr
Match:
KGN53171.2 (hypothetical protein Csa_015342 [Cucumis sativus])
HSP 1 Score: 300.1 bits (767), Expect = 1.6e-77
Identity = 144/221 (65.16%), Postives = 172/221 (77.83%), Query Frame = 0
Query: 4 GFFPGINNAVFDHDFS-------GCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSH 63
GF GIN+ V+ H+FS L E+ +D AVF SDEFRM++YKIQRCPR RSH
Sbjct: 47 GFVFGIND-VYGHEFSVVSLPELTVGNLTEKTDD-TAVFSSDEFRMYSYKIQRCPRNRSH 106
Query: 64 DWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYR 123
DWTECPYAHRGEKAQRRD R+FNY+AVACPAFR+G+CP+GDFCE+AHGVFEYWLHPARYR
Sbjct: 107 DWTECPYAHRGEKAQRRDPRQFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYR 166
Query: 124 TRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNI 183
TRACNAGRFCQRKVCFFAH+PE+LR ETKQK F+AH+ RV V A+E+P E KND + I
Sbjct: 167 TRACNAGRFCQRKVCFFAHSPEELRPETKQKSSFSAHQQRVAVDAIESPPEEKNDGILEI 226
Query: 184 VNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ 218
+ G RKN+R+FG +V++ +LPHI WI ELL+
Sbjct: 227 PARVSG------SGRKNERSFGLDVTELELPHIEWISELLK 259
BLAST of MS000273 vs. ExPASy Swiss-Prot
Match:
O65036 (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN=TZF6 PE=1 SV=1)
HSP 1 Score: 223.0 bits (567), Expect = 3.2e-57
Identity = 114/201 (56.72%), Postives = 129/201 (64.18%), Query Frame = 0
Query: 33 AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGN 92
A++GSDEFRM+AYKI+RCPRTRSHDWTECPYAHRGEKA RRD RR+ Y AVACPAFRNG
Sbjct: 46 AIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRNGA 105
Query: 93 CPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLR-SETKQKFHFN 152
C RGD CE+AHGVFEYWLHPARYRTRACNAG CQRKVCFFAH PEQLR SE K + +
Sbjct: 106 CHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEGKHRCRYA 165
Query: 153 AHRTRV----------------PVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDR 212
R +P+ S DD+ + N K L R D
Sbjct: 166 YRPVRARGGGNGDGVTMRMDDEGYDTSRSPVRSGKDDLDS--NEEKVLLKCWSRMSIVDD 225
Query: 213 NFGWEVSDSDLPHIGWICELL 217
++ D DL H WI EL+
Sbjct: 226 HYEPSDLDLDLSHFDWISELV 244
BLAST of MS000273 vs. ExPASy Swiss-Prot
Match:
Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 4.1e-44
Identity = 79/124 (63.71%), Postives = 94/124 (75.81%), Query Frame = 0
Query: 20 GCHQLMEQVEDAAAV--FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRR 79
G + E AAAV + DEFRM+ +K++RC R RSHDWTECP+AH GEKA+RRD R+
Sbjct: 55 GADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRK 114
Query: 80 FNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTP 139
++YS ACP FR G C RGD CEYAHGVFE WLHPARYRT+ C G C+R+VCFFAHTP
Sbjct: 115 YHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTP 174
Query: 140 EQLR 142
+QLR
Sbjct: 175 DQLR 178
BLAST of MS000273 vs. ExPASy Swiss-Prot
Match:
Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 5.4e-44
Identity = 79/122 (64.75%), Postives = 93/122 (76.23%), Query Frame = 0
Query: 26 EQVEDAAAV------FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFN 85
E E+AAAV + DEFRM+ +K++RC R RSHDWTECP+AH GEKA+RRD RR+
Sbjct: 58 EDEEEAAAVAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYC 117
Query: 86 YSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQ 142
YS ACP FR G C RGD CE+AHGVFE WLHPARYRT+ C G C+R+VCFFAHTP+Q
Sbjct: 118 YSGTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQ 177
BLAST of MS000273 vs. ExPASy Swiss-Prot
Match:
O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 1.7e-42
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0
Query: 35 FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCP 94
F SDEFR++ +KI+RC R RSHDWTECP+AH GEKA+RRD R+F+YS ACP FR G+C
Sbjct: 86 FSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCR 145
Query: 95 RGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLR 142
RGD CE++HGVFE WLHP+RYRT+ C G C+R++CFFAHT EQLR
Sbjct: 146 RGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLR 192
BLAST of MS000273 vs. ExPASy Swiss-Prot
Match:
Q9ZWA1 (Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=TZF4 PE=1 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 3.9e-42
Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0
Query: 30 DAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAF- 89
D+ + SD FRMF +KI+RC R+RSHDWT+CP+AH GEKA+RRD RRF YS CP F
Sbjct: 73 DSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFR 132
Query: 90 RNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLR 142
R G+C RGD CE+AHGVFE WLHP RYRT AC G+ C+RKVCFFAH+P QLR
Sbjct: 133 RGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLR 185
BLAST of MS000273 vs. ExPASy TrEMBL
Match:
A0A6J1CJI1 (zinc finger CCCH domain-containing protein 54 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011570 PE=4 SV=1)
HSP 1 Score: 469.5 bits (1207), Expect = 7.3e-129
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0
Query: 1 MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTE 60
MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTE
Sbjct: 2 MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTE 61
Query: 61 CPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRAC 120
CPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRAC
Sbjct: 62 CPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRAC 121
Query: 121 NAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGL 180
NAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGL
Sbjct: 122 NAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGL 181
Query: 181 KGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ 218
KGLTVREIRERKNDRNFGWEVSDSDLPHIGWI ELLQ
Sbjct: 182 KGLTVREIRERKNDRNFGWEVSDSDLPHIGWIRELLQ 218
BLAST of MS000273 vs. ExPASy TrEMBL
Match:
A0A6J1CHL2 (zinc finger CCCH domain-containing protein 54 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011570 PE=4 SV=1)
HSP 1 Score: 416.0 bits (1068), Expect = 9.6e-113
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
Query: 25 MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVA 84
MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVA
Sbjct: 1 MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVA 60
Query: 85 CPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSET 144
CPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSET
Sbjct: 61 CPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSET 120
Query: 145 KQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDS 204
KQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDS
Sbjct: 121 KQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDS 180
Query: 205 DLPHIGWICELLQ 218
DLPHIGWI ELLQ
Sbjct: 181 DLPHIGWIRELLQ 193
BLAST of MS000273 vs. ExPASy TrEMBL
Match:
A0A5A7TRB5 (Zinc finger CCCH domain-containing protein 54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00410 PE=4 SV=1)
HSP 1 Score: 311.2 bits (796), Expect = 3.3e-81
Identity = 150/224 (66.96%), Postives = 175/224 (78.12%), Query Frame = 0
Query: 1 MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRT 60
MFQGF GIN+ V+ H+FS L E+V+D AVF +DEFRM++YKIQRCPR
Sbjct: 1 MFQGFVFGIND-VYGHEFSAVSLPEVTVGNLTEKVDD-TAVFSTDEFRMYSYKIQRCPRN 60
Query: 61 RSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPA 120
RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+CP+GDFCE+AHGVFEYWLHPA
Sbjct: 61 RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
Query: 121 RYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDV 180
RYRTRACNAGRFCQRKVCFFAH+PE+LR ETK KF+ NA R RV V AVE+P E KND +
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGI 180
Query: 181 SNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ 218
I G RKN+R+FG++VS+ +LPHI WI ELL+
Sbjct: 181 LEIPARENG------GGRKNERSFGFDVSELELPHIEWISELLK 216
BLAST of MS000273 vs. ExPASy TrEMBL
Match:
A0A1S3BYP8 (zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC103494870 PE=4 SV=1)
HSP 1 Score: 311.2 bits (796), Expect = 3.3e-81
Identity = 150/224 (66.96%), Postives = 175/224 (78.12%), Query Frame = 0
Query: 1 MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRT 60
MFQGF GIN+ V+ H+FS L E+V+D AVF +DEFRM++YKIQRCPR
Sbjct: 1 MFQGFVFGIND-VYGHEFSAVSLPEVTVGNLTEKVDD-TAVFSTDEFRMYSYKIQRCPRN 60
Query: 61 RSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPA 120
RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+CP+GDFCE+AHGVFEYWLHPA
Sbjct: 61 RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
Query: 121 RYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDV 180
RYRTRACNAGRFCQRKVCFFAH+PE+LR ETK KF+ NA R RV V AVE+P E KND +
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGI 180
Query: 181 SNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ 218
I G RKN+R+FG++VS+ +LPHI WI ELL+
Sbjct: 181 LEIPARENG------GGRKNERSFGFDVSELELPHIEWISELLK 216
BLAST of MS000273 vs. ExPASy TrEMBL
Match:
A0A6J1JDT4 (zinc finger CCCH domain-containing protein 54 OS=Cucurbita maxima OX=3661 GN=LOC111483496 PE=4 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 6.1e-75
Identity = 143/227 (63.00%), Postives = 169/227 (74.45%), Query Frame = 0
Query: 1 MFQGFFPGINNAVFDHDFSGC---------HQLMEQVEDAAAVFGSDEFRMFAYKIQRCP 60
MFQGF GIN+ V+ H+F+ +L Q D A+F SDEFRM+A+KIQRCP
Sbjct: 1 MFQGFVFGIND-VYGHEFTAVALPEFAYRNTRLTPQTND-TALFNSDEFRMYAFKIQRCP 60
Query: 61 RTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLH 120
++RSHDWTECPYAHRGEKAQRRD RRFNYSAVACPAFR G+CP+GDFCE+AHGVFE+WLH
Sbjct: 61 KSRSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLH 120
Query: 121 PARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKND 180
P RYRTRACNAGRFCQRKVCFFAH+PE+LR ETK K HF A R + A++ P+E KND
Sbjct: 121 PTRYRTRACNAGRFCQRKVCFFAHSPEELRPETKNKLHFAAPVERAALAALKYPVERKND 180
Query: 181 DVSNIVNGLKGLTVREIRE-RKNDRNFGWEVSDSDLPHIGWICELLQ 218
VS I V+EI + N+R+ E S+S+LPHI WI ELLQ
Sbjct: 181 GVSEI-------PVKEISDGLGNERSSELEASESELPHIEWISELLQ 218
BLAST of MS000273 vs. TAIR 10
Match:
AT5G07500.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )
HSP 1 Score: 223.0 bits (567), Expect = 2.3e-58
Identity = 114/201 (56.72%), Postives = 129/201 (64.18%), Query Frame = 0
Query: 33 AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGN 92
A++GSDEFRM+AYKI+RCPRTRSHDWTECPYAHRGEKA RRD RR+ Y AVACPAFRNG
Sbjct: 46 AIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRNGA 105
Query: 93 CPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLR-SETKQKFHFN 152
C RGD CE+AHGVFEYWLHPARYRTRACNAG CQRKVCFFAH PEQLR SE K + +
Sbjct: 106 CHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSEGKHRCRYA 165
Query: 153 AHRTRV----------------PVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDR 212
R +P+ S DD+ + N K L R D
Sbjct: 166 YRPVRARGGGNGDGVTMRMDDEGYDTSRSPVRSGKDDLDS--NEEKVLLKCWSRMSIVDD 225
Query: 213 NFGWEVSDSDLPHIGWICELL 217
++ D DL H WI EL+
Sbjct: 226 HYEPSDLDLDLSHFDWISELV 244
BLAST of MS000273 vs. TAIR 10
Match:
AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )
HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0
Query: 35 FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCP 94
F SDEFR++ +KI+RC R RSHDWTECP+AH GEKA+RRD R+F+YS ACP FR G+C
Sbjct: 86 FSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCR 145
Query: 95 RGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLR 142
RGD CE++HGVFE WLHP+RYRT+ C G C+R++CFFAHT EQLR
Sbjct: 146 RGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLR 192
BLAST of MS000273 vs. TAIR 10
Match:
AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )
HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 72/107 (67.29%), Postives = 88/107 (82.24%), Query Frame = 0
Query: 35 FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCP 94
F SDEFR++ +KI+RC R RSHDWTECP+AH GEKA+RRD R+F+YS ACP FR G+C
Sbjct: 86 FSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCR 145
Query: 95 RGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLR 142
RGD CE++HGVFE WLHP+RYRT+ C G C+R++CFFAHT EQLR
Sbjct: 146 RGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLR 192
BLAST of MS000273 vs. TAIR 10
Match:
AT1G03790.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )
HSP 1 Score: 172.9 bits (437), Expect = 2.7e-43
Identity = 75/113 (66.37%), Postives = 88/113 (77.88%), Query Frame = 0
Query: 30 DAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAF- 89
D+ + SD FRMF +KI+RC R+RSHDWT+CP+AH GEKA+RRD RRF YS CP F
Sbjct: 73 DSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFR 132
Query: 90 RNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLR 142
R G+C RGD CE+AHGVFE WLHP RYRT AC G+ C+RKVCFFAH+P QLR
Sbjct: 133 RGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLR 185
BLAST of MS000273 vs. TAIR 10
Match:
AT2G41900.1 (CCCH-type zinc finger protein with ARM repeat domain )
HSP 1 Score: 171.4 bits (433), Expect = 8.0e-43
Identity = 70/109 (64.22%), Postives = 86/109 (78.90%), Query Frame = 0
Query: 33 AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGN 92
+++ +DEFRM+++K++ C R SHDWTECP+ H GE A+RRD R+F+YS V CP FR G
Sbjct: 255 SIYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGA 314
Query: 93 CPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLR 142
C RGD CEYAHGVFE WLHPA+YRTR C G C R+VCFFAHTPE+LR
Sbjct: 315 CRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELR 363
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022141093.1 | 1.5e-128 | 99.54 | zinc finger CCCH domain-containing protein 54 isoform X1 [Momordica charantia] | [more] |
XP_022141094.1 | 2.0e-112 | 99.48 | zinc finger CCCH domain-containing protein 54 isoform X2 [Momordica charantia] | [more] |
XP_038878131.1 | 1.4e-81 | 69.27 | zinc finger CCCH domain-containing protein 54 [Benincasa hispida] | [more] |
XP_008454474.1 | 6.9e-81 | 66.96 | PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo] >KAA0044... | [more] |
KGN53171.2 | 1.6e-77 | 65.16 | hypothetical protein Csa_015342 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
O65036 | 3.2e-57 | 56.72 | Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q9FU27 | 4.1e-44 | 63.71 | Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=... | [more] |
Q6L4N4 | 5.4e-44 | 64.75 | Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX... | [more] |
O82307 | 1.7e-42 | 67.29 | Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
Q9ZWA1 | 3.9e-42 | 66.37 | Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CJI1 | 7.3e-129 | 99.54 | zinc finger CCCH domain-containing protein 54 isoform X1 OS=Momordica charantia ... | [more] |
A0A6J1CHL2 | 9.6e-113 | 99.48 | zinc finger CCCH domain-containing protein 54 isoform X2 OS=Momordica charantia ... | [more] |
A0A5A7TRB5 | 3.3e-81 | 66.96 | Zinc finger CCCH domain-containing protein 54 OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A1S3BYP8 | 3.3e-81 | 66.96 | zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC1034... | [more] |
A0A6J1JDT4 | 6.1e-75 | 63.00 | zinc finger CCCH domain-containing protein 54 OS=Cucurbita maxima OX=3661 GN=LOC... | [more] |
Match Name | E-value | Identity | Description | |
AT5G07500.1 | 2.3e-58 | 56.72 | Zinc finger C-x8-C-x5-C-x3-H type family protein | [more] |
AT2G25900.1 | 1.2e-43 | 67.29 | Zinc finger C-x8-C-x5-C-x3-H type family protein | [more] |
AT2G25900.2 | 1.2e-43 | 67.29 | Zinc finger C-x8-C-x5-C-x3-H type family protein | [more] |
AT1G03790.1 | 2.7e-43 | 66.37 | Zinc finger C-x8-C-x5-C-x3-H type family protein | [more] |
AT2G41900.1 | 8.0e-43 | 64.22 | CCCH-type zinc finger protein with ARM repeat domain | [more] |