MS000272 (gene) Bitter gourd (TR) v1

Overview


Name	MS000272
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	myb-like transcription factor family protein
Location	scaffold44: 467031 .. 470072 (-)
RNA-Seq Expression	MS000272
Synteny	MS000272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGGGAATCGCCGAGAAAATGTTCGCATTGTGGATTGAACGGCCACAATTCGCGGACGTGTAGCAATTTTGCGAAGGGTAACAATTATTGCGTGAAGTTGTTCGGAGTGAATTTGATGGAAAATAATGACGAATCCATTCGGAAGAGTCTGAGCATGGGGAATTTGATCCACGCATGCAATAACGGCGTCGATCATAATAACGCCGCTGCCGCCGGCGCCGGGGCCAATAATGCCGGCGCCGGAGACGACGGTGGGTATCTTTCCGATGGGCTCATTCATAACAAGAAGCGCAAAGCCGCTCACGAGAGGAAGAAAGGTAAATGGTTGAATTATTTTGTTTTATTTTTATTTTTTGTTCCGATTGCATTTGAAAATTTTAGTTTATTTATGAGTGTTCTTATATTTTTGTTTTTCGTTGCAGAGATGCGTTAATTGTGGAATTATATATATCTAAATCAATTGAGATTATTTATTGAGAGGAAAATGATTAATATAGATTTTTGTATTTACAATGCATATTTATTTTTTTTGTATCTTAGGAAGAGTGAATTGTTTCGTCAATAGTAATTGAAAACAACGTTACTTAACTGGTTGTAGTTGCAATCTTAGAGCTTATTTGGTATGGGTCTCTTTCGTATCGTTGTCGTTTCTTATTTTATTATTTTTAATTTTATTGAAAAATCTAAATATTCAACAACTATTTTACATTTTGTTTCAAAATTTTGGAAACATAAAAACAAGTTTCTTGTTTTTTTTTTCTCGTTTCCAATTTTATCTGGAAAAATTTTTGGAAACGATAAAAAGTTTGCTTCGTCATTCTCGAATCTATGTTGGGGGTGATGCAATTATATTTTTCTTCACTAAAAAATAAGGAAACAAAAATAACAAACGGTAACATTATTGAATGAACCATAATATTTCTATTTCTTGGTCTTGTTTTCAGATTTTAGAAACATGAGCATTTGGTAATTGTTTTTACATTTCTTGTTTTATTTTTTAAAATCTCGAAACGAGAAACATAAAAAGTTTATTGCGCGAGAATTTGATTAGATGAGTTGTGAAATGATGATATGCAGGAAAGCCATGGAGTGAGGAGGAGCATAGAACATTTTTGGCTGGTTTGAAGAAGCTGGGGAAAGGGGATTGGAGAGGGATTTCAAAGAACTTTGTGACAACAAGAACACCAACCCAAGTAGCCAGCCATGCCCAAAAGTACTTTTTGAGGAAGATGAATGCAAATGACAAGAAGAAACGCAGAGCCAGTCTTTTTGACATGCCCGAAATCACCAAAGTACGTAGTAATCAGACTGTGTTTGGAAATAACCAAAATCACTTTTGTCATTGTCAAAATTACTCTCTTTCCATTGATCACGTCTGCCAAATTTAAAAAATAATTTTAAGAAAGTTTAATTAAAAAACTTTAAATCGATGATTTTGAAAAATCAATTACTCTCAAACACACTTTTTATCTTTCAGTTTTAGTGCTTTTTTCAGAAACTACTCCGAAAAGAAGCGGAAATTAACTGGTGTTATTGTGGTTGGTTTTACAATATATAGAACAATATTGTTGTTCCTCAAGATTGCAATAAGGCTTCATCGTCAATGAGTAGTGGTGAATCCTCTCAAATTCTACTGCCAAAGATCAGCTCTGAAAATCAACAACAGGTGAATTTTTTTTCTTTTTTTAACCTGTTTCTTTCTAATTAAATTACATTACTGTGTATGAATAATAATATAATATTTTGGGATGAGCAGGTGAATAATTTACCAACACAACTCATCAATCGATTCCCTCATCTTTGTTTGGATTCTCCTCATTTTGTTCCTCCAGCAGCAGCCTCTGGTGTTGCAAATTTGCATGGGATTCCATATGTGGTAACAACACTAACACAACCCCTTTTTTAACTTTTTACAGTTTAATAATTACTGCACCTTTCACAGAATCACAGATGTTGTGTGTATATATATATATAATTAAATAATAAATTTGGGTTTTTTTTTTTAAATTCCCTATAATAACTAAGTAGAAACTTGTTCCATAATAATTTTTTGGTATTAAAACTTTCACTTTTTCAATCTTAAATTTGTGTATTAATATTTTCCTAAAACACTCTTGTAAAGGATGTTTATGAAGTGATACTAAGGTTTTTTATCTTAAAGTTTTATTTCTAATTCTAACCTTGTCAAAAATATTTTTTGTGGAGTAGAATATGAATGAAAAAATTAACAATTTTAAAAAAAGTAATTTTCTTTTTAAATAGCCCTAGATTTATAGCCTTGTTTAATAACTATTTCACTTTTAAAATTAAGCTTATATTAACTTTCACTGTTGTATTCTTTAGTTTTGTTAAATAGTTTTTATGAACATTTTCAAAATCTAGATCCGAATTTTAAAAACAACAAAGAAAAAAGTTTTCAAAACTCGTATTTTGTTAATGAAATTTTGTTTAGAATTCAAATATGTTTTTTTAGAGTAAAAAACGTGTAGTGTACTAATTAAACTATAAAAAATACTAACAAATATGATTTTGAAACCTAACCCAACATGTAATTGACATATATCTCGAATCACCTGACCTTTTAGTCGAAGAATATGTGTCTTAACCAATTAAGCTATGGTGAGGTCGGCAGAAACCCAAAACTTAAACTTAAACTAACTTGACAAGTAGTTCATTCATATGTTTTTGGATATTGATTTGTGTGATGATGATGAAGAATGTTGAATGATAGGTTGGAGTTTCCCCAAATGTGCCAATAATCCCATTGGTGAACATAGGAGGTAGTGTGATGACAGTGGGGAAAAGCAGCAATCCAAATGCAACACTAATTTCCCATCCATCAGGGATTCCTCCATCTCCAAGATCCTCCCCTCACAGAACAACAACAGCAACAAAGTTGGAGTTGCAGTTGCAGTTGCAGTTGCAGCCCTCTGGTTTCGAGGCTTCAGATGCCTTGGAGCTCAAGATTGGACTCCCCCAATCTCCACAGCCCAAAAACCTCTCCTCCCACACTTCTGGAGGAGCCATTAGAGTCATT

mRNA sequence

ATGGTGAGGGAATCGCCGAGAAAATGTTCGCATTGTGGATTGAACGGCCACAATTCGCGGACGTGTAGCAATTTTGCGAAGGGTAACAATTATTGCGTGAAGTTGTTCGGAGTGAATTTGATGGAAAATAATGACGAATCCATTCGGAAGAGTCTGAGCATGGGGAATTTGATCCACGCATGCAATAACGGCGTCGATCATAATAACGCCGCTGCCGCCGGCGCCGGGGCCAATAATGCCGGCGCCGGAGACGACGGTGGGTATCTTTCCGATGGGCTCATTCATAACAAGAAGCGCAAAGCCGCTCACGAGAGGAAGAAAGGAAAGCCATGGAGTGAGGAGGAGCATAGAACATTTTTGGCTGGTTTGAAGAAGCTGGGGAAAGGGGATTGGAGAGGGATTTCAAAGAACTTTGTGACAACAAGAACACCAACCCAAGTAGCCAGCCATGCCCAAAAGTACTTTTTGAGGAAGATGAATGCAAATGACAAGAAGAAACGCAGAGCCAGTCTTTTTGACATGCCCGAAATCACCAAAGTACGTAGTAATCAGACTGTGTTTGGAAATAACCAAAATCACTTTTGTCATTGTCAAAATTACTCTCTTTCCATTGATCACCAGGTGAATAATTTACCAACACAACTCATCAATCGATTCCCTCATCTTTGTTTGGATTCTCCTCATTTTGTTCCTCCAGCAGCAGCCTCTGGTGTTGCAAATTTGCATGGGATTCCATATGTGGTTGGAGTTTCCCCAAATGTGCCAATAATCCCATTGGTGAACATAGGAGGTAGTGTGATGACAGTGGGGAAAAGCAGCAATCCAAATGCAACACTAATTTCCCATCCATCAGGGATTCCTCCATCTCCAAGATCCTCCCCTCACAGAACAACAACAGCAACAAAGTTGGAGTTGCAGTTGCAGTTGCAGTTGCAGCCCTCTGGTTTCGAGGCTTCAGATGCCTTGGAGCTCAAGATTGGACTCCCCCAATCTCCACAGCCCAAAAACCTCTCCTCCCACACTTCTGGAGGAGCCATTAGAGTCATT

Coding sequence (CDS)

ATGGTGAGGGAATCGCCGAGAAAATGTTCGCATTGTGGATTGAACGGCCACAATTCGCGGACGTGTAGCAATTTTGCGAAGGGTAACAATTATTGCGTGAAGTTGTTCGGAGTGAATTTGATGGAAAATAATGACGAATCCATTCGGAAGAGTCTGAGCATGGGGAATTTGATCCACGCATGCAATAACGGCGTCGATCATAATAACGCCGCTGCCGCCGGCGCCGGGGCCAATAATGCCGGCGCCGGAGACGACGGTGGGTATCTTTCCGATGGGCTCATTCATAACAAGAAGCGCAAAGCCGCTCACGAGAGGAAGAAAGGAAAGCCATGGAGTGAGGAGGAGCATAGAACATTTTTGGCTGGTTTGAAGAAGCTGGGGAAAGGGGATTGGAGAGGGATTTCAAAGAACTTTGTGACAACAAGAACACCAACCCAAGTAGCCAGCCATGCCCAAAAGTACTTTTTGAGGAAGATGAATGCAAATGACAAGAAGAAACGCAGAGCCAGTCTTTTTGACATGCCCGAAATCACCAAAGTACGTAGTAATCAGACTGTGTTTGGAAATAACCAAAATCACTTTTGTCATTGTCAAAATTACTCTCTTTCCATTGATCACCAGGTGAATAATTTACCAACACAACTCATCAATCGATTCCCTCATCTTTGTTTGGATTCTCCTCATTTTGTTCCTCCAGCAGCAGCCTCTGGTGTTGCAAATTTGCATGGGATTCCATATGTGGTTGGAGTTTCCCCAAATGTGCCAATAATCCCATTGGTGAACATAGGAGGTAGTGTGATGACAGTGGGGAAAAGCAGCAATCCAAATGCAACACTAATTTCCCATCCATCAGGGATTCCTCCATCTCCAAGATCCTCCCCTCACAGAACAACAACAGCAACAAAGTTGGAGTTGCAGTTGCAGTTGCAGTTGCAGCCCTCTGGTTTCGAGGCTTCAGATGCCTTGGAGCTCAAGATTGGACTCCCCCAATCTCCACAGCCCAAAAACCTCTCCTCCCACACTTCTGGAGGAGCCATTAGAGTCATT

Protein sequence

MVRESPRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHACNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDMPEITKVRSNQTVFGNNQNHFCHCQNYSLSIDHQVNNLPTQLINRFPHLCLDSPHFVPPAAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSSNPNATLISHPSGIPPSPRSSPHRTTTATKLELQLQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAIRVI

Homology

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BLAST of MS000272 vs. NCBI nr
Match: XP_022141165.1 (probable transcription factor At5g61620 [Momordica charantia])

HSP 1 Score: 619.4 bits (1596), Expect = 1.9e-173
Identity = 320/357 (89.64%), Postives = 325/357 (91.04%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHA 60
           MVRESPRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHA
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHA 60

Query: 61  CNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTFL 120
           CNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTFL
Sbjct: 61  CNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTFL 120

Query: 121 AGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDMPEITK- 180
           AGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDMPEITK 
Sbjct: 121 AGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDMPEITKN 180

Query: 181 -------VRSNQTVFGNNQNHFCHCQNYSLSIDHQVNNLPTQLINRFPHLCLDSPHFVPP 240
                       +   + ++        S     QVNNLPTQLINRFPHLCLDSPHFVPP
Sbjct: 181 NIVVPQDCNKASSSMSSGESSQILLPKISSENQQQVNNLPTQLINRFPHLCLDSPHFVPP 240

Query: 241 AAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSSNPNATLISHPSGIPPSPRS 300
           AAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSS+PNATLISHPSGIPPSPRS
Sbjct: 241 AAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSSSPNATLISHPSGIPPSPRS 300

Query: 301 SPHRTTTATKLELQLQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAIRVI 350
           SPHRTTTATKLE  LQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAIRVI
Sbjct: 301 SPHRTTTATKLE--LQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAIRVI 355

[Close]

BLAST of MS000272 vs. NCBI nr
Match: XP_022985491.1 (probable transcription factor At5g61620 [Cucurbita maxima])

HSP 1 Score: 460.3 bits (1183), Expect = 1.5e-125
Identity = 264/377 (70.03%), Postives = 287/377 (76.13%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNN-------YCVKLFGVNLMENNDESIRKSLS 60
           MVRESPRKCSHCGLNGHNSRTCSNF KGNN       YCVKLFGVNLMEN DES+RKSLS
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFLKGNNNYSNSSYYCVKLFGVNLMENRDESMRKSLS 60

Query: 61  MGNL-IHACNNGVDHNNAAAAGAGAN----NAGAGDDGGYLSDGLIHNKKRKAAHERKKG 120
           MGNL +H+CNN +D N AAA  A  N    N+ + D+ GYLSDG IHNK+RKAAHERKKG
Sbjct: 61  MGNLNLHSCNNVLDLNTAAAVAAVNNVADDNSASADNAGYLSDGFIHNKRRKAAHERKKG 120

Query: 121 KPWSEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRR 180
           KPW+EEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKRR
Sbjct: 121 KPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRR 180

Query: 181 ASLFDMPEITKVRSNQTVFGNNQNHFCHC-------QNYSLSIDHQVNNLPTQLINRFPH 240
           ASLFDMPEI           NN    C         +N +     QVNNLP QLINRFPH
Sbjct: 181 ASLFDMPEIK----------NNVPQDCQASGETSLPKNNNSENQRQVNNLPAQLINRFPH 240

Query: 241 LCLDSPHFVPPA---AASGVANLHGIPYVVGVSPNVPIIPLVNI--GGSVMTVGKS-SNP 300
           LCLD+PHFVPPA   AAS  ANLHGIPYVVGVSPNVPI+PLVNI  GG VM + KS  +P
Sbjct: 241 LCLDAPHFVPPATGSAASAAANLHGIPYVVGVSPNVPILPLVNIGRGGGVMAMPKSPRSP 300

Query: 301 NATLISHPSGIPPSPRSSPHRTTTATKLELQLQ---LQLQPSGFEASDALELKIGLPQSP 350
           NA +  HPSGIPPSPR+SP R      +  QLQ   + +  S FEA DALELKIGLPQSP
Sbjct: 301 NAPMAGHPSGIPPSPRTSPSR-----PILQQLQPSAIAVAASNFEA-DALELKIGLPQSP 360

[Close]

BLAST of MS000272 vs. NCBI nr
Match: XP_022989335.1 (probable transcription factor At5g61620 [Cucurbita maxima])

HSP 1 Score: 459.1 bits (1180), Expect = 3.3e-125
Identity = 267/373 (71.58%), Postives = 289/373 (77.48%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKG---NNYCVKLFGVNLMENNDESIRKSLSMGNL 60
           MVRESPRKCSHCGLNGHNSRTCSNFAKG   NNYCVKLFGVNLM+N DES+RKSLSMGNL
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDESMRKSLSMGNL 60

Query: 61  -IHACNNGVDHNNAAAAG--AGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEE 120
            IH CN     +NAAAAG      NA  GD+GGYLSDGLIHNKKRKAA ERKKGKPW+EE
Sbjct: 61  NIHVCN-----HNAAAAGNNVACYNAAVGDEGGYLSDGLIHNKKRKAALERKKGKPWTEE 120

Query: 121 EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 180
           EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD+
Sbjct: 121 EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDI 180

Query: 181 PEITK------VRSNQTVFGNNQNHFCHCQNYSLSIDHQVNNLPTQLINRFPHLCLDSPH 240
           PEI          S+ ++  N +         S     QV+NLPTQLINRFPHLCLD+PH
Sbjct: 181 PEIKNNVSQECQASSSSMRANGETSQILLPKNSSENQQQVSNLPTQLINRFPHLCLDTPH 240

Query: 241 FVPP---AAASGVANLHGIPYVVGVSP-NVPIIPLVNIG---GSVMTVGKS----SNPN- 300
           FVP    + ASGVANLHGIPYVVGVSP NVPIIPLVN+G    +VM + KS    S+PN 
Sbjct: 241 FVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVNLGRRSSAVMAMPKSPIRTSSPNA 300

Query: 301 ATLISHPSGIPPSPRSSPHRTTTATKLELQLQLQLQPSGFEASDALELKIGLPQSPQPKN 350
           A L++HPSGIPPSPRSSP R      L +QLQ     + FE +DALELKIGLPQSPQ KN
Sbjct: 301 AALVAHPSGIPPSPRSSPQR-----PLMMQLQASAMAASFE-TDALELKIGLPQSPQAKN 360

[Close]

BLAST of MS000272 vs. NCBI nr
Match: XP_022922957.1 (probable transcription factor At5g61620 [Cucurbita moschata])

HSP 1 Score: 457.6 bits (1176), Expect = 9.6e-125
Identity = 264/380 (69.47%), Postives = 286/380 (75.26%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNN-------YCVKLFGVNLMENNDESIRKSLS 60
           MVRESPRKCSHCGLNGHNSRTCSNF KGNN       YCVKLFGVNLMEN DES+RKSLS
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFLKGNNNYSNSSYYCVKLFGVNLMENRDESMRKSLS 60

Query: 61  MGNL-IHACNNGVDHNNAAAAGAGAN-----NAGAGDDGGYLSDGLIHNKKRKAAHERKK 120
           MGNL +H+CNN +D N AAAA A  N     N+ + D+ GYLSDG IHNK+RKAAHERKK
Sbjct: 61  MGNLNLHSCNNVLDLNTAAAAAAAVNNVADDNSASADNAGYLSDGFIHNKRRKAAHERKK 120

Query: 121 GKPWSEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKR 180
           GKPW+EEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKR
Sbjct: 121 GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 180

Query: 181 RASLFDMPEITKVRSNQTVFGNNQNHFCHC-------QNYSLSIDHQVNNLPTQLINRFP 240
           RASLFDMPEI           NN    C         +N S     QVNNLP QLINRFP
Sbjct: 181 RASLFDMPEIK----------NNVPQDCQASGETSLPKNNSSENQQQVNNLPAQLINRFP 240

Query: 241 HLCLDSPHFVPPA---AASGVANLHGIPYVVGVSPNVPIIPLVNI----GGSVMTVGKS- 300
           HLCLD+P FVPPA   AAS  ANLHGIPYVVGVSPNVPI+PLVNI    GG VM + KS 
Sbjct: 241 HLCLDAPQFVPPATGSAASAAANLHGIPYVVGVSPNVPILPLVNIGRRGGGGVMAMPKSP 300

Query: 301 SNPNATLISHPSGIPPSPRSSPHRTTTATKLELQLQ---LQLQPSGFEASDALELKIGLP 350
            +PNA +  HPSGIPPSPR+SP R      +  QLQ   + +  S FEA DALELKIGLP
Sbjct: 301 RSPNAPMAGHPSGIPPSPRTSPSR-----PILQQLQPSAIAVAASNFEA-DALELKIGLP 360

[Close]

BLAST of MS000272 vs. NCBI nr
Match: XP_023553250.1 (probable transcription factor At5g61620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456.4 bits (1173), Expect = 2.1e-124
Identity = 262/376 (69.68%), Postives = 285/376 (75.80%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNN-------YCVKLFGVNLMENNDESIRKSLS 60
           MVRESPRKCSHCGLNGHNSRTCSNF KGNN       YCVKLFGVNLMEN DES+RKSLS
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFLKGNNNYSNSSYYCVKLFGVNLMENRDESMRKSLS 60

Query: 61  MGNL-IHACNNGVDHNNAAAA-GAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPW 120
           MGNL +H+CNN +D N AAA      +N+ + D+ GYLSDG IHNK+RKAAHERKKGKPW
Sbjct: 61  MGNLNLHSCNNVLDLNTAAAVYNVADDNSASADNAGYLSDGFIHNKRRKAAHERKKGKPW 120

Query: 121 SEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL 180
           +EEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKRRASL
Sbjct: 121 TEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRASL 180

Query: 181 FDMPEITKVRSNQTVFGNNQNHFCHC-------QNYSLSIDHQVNNLPTQLINRFPHLCL 240
           FDMPEI           NN    C         +N S     QVNNLP QLINRFPHLCL
Sbjct: 181 FDMPEIK----------NNVPQDCQASGETSLPKNNSSENQQQVNNLPAQLINRFPHLCL 240

Query: 241 DSPHFVPPA---AASGVANLHGIPYVVGVSPNVPIIPLVNI----GGSVMTVGKS-SNPN 300
           D+PHFVPPA   AAS  ANLHGIPYVVGVSPNVPI+PLVNI    GG VM + KS  +PN
Sbjct: 241 DAPHFVPPATGSAASAAANLHGIPYVVGVSPNVPILPLVNIGRRGGGGVMAMPKSPRSPN 300

Query: 301 ATLISHPSGIPPSPRSSPHRTTTATKLELQLQ---LQLQPSGFEASDALELKIGLPQSPQ 350
           A +  HPSGIPPSPR+SP R      +  QLQ   + +  S FEA DALELKIGLPQSPQ
Sbjct: 301 APMAGHPSGIPPSPRTSPSR-----PILQQLQPSAIAVAASNFEA-DALELKIGLPQSPQ 359

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BLAST of MS000272 vs. ExPASy Swiss-Prot
Match: Q9FKF9 (Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g61620 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.6e-48
Identity = 152/362 (41.99%), Postives = 194/362 (53.59%), Query Frame = 0


Query: 1   MVRES---PRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMEN-----NDESIRKSL 60
           MV+E+    + CSHCG NGHN+RTC N    N   VKLFGVN+  +        ++RKSL
Sbjct: 1   MVKETVTVAKTCSHCGHNGHNARTCLNGV--NKASVKLFGVNISSDPIRPPEVTALRKSL 60

Query: 61  SMGNLIHACNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWS 120
           S+GNL     N  D +N    G+G +   A DD GY SDG IH+KK K AHE+KKGKPW+
Sbjct: 61  SLGNLDALLAN--DESN----GSG-DPIAAVDDTGYHSDGQIHSKKGKTAHEKKKGKPWT 120

Query: 121 EEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLF 180
           EEEHR FL GL KLGKGDWRGI+K+FV+TRTPTQVASHAQKYF+R +N NDK+KRRASLF
Sbjct: 121 EEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIR-LNVNDKRKRRASLF 180

Query: 181 DM---PEITKVRSNQTVFGNNQNHFCHCQNYSLSIDHQV--NNLPTQLINRFPHLCLDSP 240
           D+    +  K R++Q             +     I   V   +  T++ NRF +L ++  
Sbjct: 181 DISLEDQKEKERNSQDASTKTPP-----KQPITGIQQPVVQGHTQTEISNRFQNLSMEYM 240

Query: 241 HFVPPAAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSSNPNATL-ISHPSGI 300
               P     +   +  P ++   PN P+                +NP   +   HPSGI
Sbjct: 241 PIYQP-----IPPYYNFPPIM-YHPNYPMY--------------YANPQVPVRFVHPSGI 300

Query: 301 PPSPRSSPHRTTTATKLELQLQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAI 349
            P PR  P        + L L    + S     D L+L IGLP  PQ    S  T  G I
Sbjct: 301 -PVPRHIP--------IGLPLSQPSEASNMTNKDGLDLHIGLP--PQATGASDLTGHGVI 316

[Close]

BLAST of MS000272 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-39
Identity = 98/175 (56.00%), Postives = 118/175 (67.43%), Query Frame = 0


Query: 7   RKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHACNNGVD 66
           R+CSHC  NGHNSRTC N  +G    VKLFGV L E    SIRKS SMGNL H   +G  
Sbjct: 3   RRCSHCNHNGHNSRTCPN--RG----VKLFGVRLTEG---SIRKSASMGNLSHYTGSG-- 62

Query: 67  HNNAAAAGAGANNAGAGDD-------GGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTF 126
              +   G G+N  G+  D        GY S+  +      ++ ERKKG PW+EEEHR F
Sbjct: 63  ---SGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGS--SSSRERKKGTPWTEEEHRMF 122

Query: 127 LAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 175
           L GL+KLGKGDWRGIS+N+VTTRTPTQVASHAQKYF+R+ N + ++KRR+SLFDM
Sbjct: 123 LLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVS-RRKRRSSLFDM 160

[Close]

BLAST of MS000272 vs. ExPASy Swiss-Prot
Match: Q7XC57 (Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.6e-37
Identity = 94/168 (55.95%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 7   RKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHACNNGVD 66
           R+CSHC  NGHNSRTC N  +G    VK+FGV L    D SIRKS SMGNL    +    
Sbjct: 3   RRCSHCSHNGHNSRTCPN--RG----VKIFGVRL---TDGSIRKSASMGNLSLLSSAAGS 62

Query: 67  HNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTFLAGLKKL 126
            +  A+   G + A    D GY SD  +      A  +RKKG PW+EEEHR FL GL+KL
Sbjct: 63  TSGGASPADGPDAAPTAAD-GYASDDFVQGSS-SATRDRKKGVPWTEEEHRRFLLGLQKL 122

Query: 127 GKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 175
           GKGDWRGIS+NFV +RTPTQVASHAQKYF+R+ N   ++KRR+SLFDM
Sbjct: 123 GKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMT-RRKRRSSLFDM 158

[Close]

BLAST of MS000272 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-25
Identity = 70/144 (48.61%), Postives = 95/144 (65.97%), Query Frame = 0


Query: 33  VKLFGVNLMENNDESIRKSLSMGNLIHACNNGVDHNNAAAAGAGANNAGA--GDDGGYLS 92
           + LFGV +     + +RKS+S+ +L    +   ++NN      G NN  +    D GY S
Sbjct: 24  IMLFGVRV---KVDPMRKSVSLNDLSQYEHPNANNNN----NGGDNNESSKVAQDEGYAS 83

Query: 93  DGLIHNKKRKAAHERKKGKPWSEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASH 152
                  +  +  ERK+G PW+EEEH+ FL GL+K+GKGDWRGIS+NFV TRTPTQVASH
Sbjct: 84  ADDAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASH 143

Query: 153 AQKYFLRKMNANDKKKRRASLFDM 175
           AQKYFLR+ N N +++RR+SLFD+
Sbjct: 144 AQKYFLRRSNLN-RRRRRSSLFDI 159

[Close]

BLAST of MS000272 vs. ExPASy Swiss-Prot
Match: B8BI93 (Transcription factor MYBS2 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS2 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.5e-24
Identity = 72/127 (56.69%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 48  IRKSLSMGNLIHACNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKK 107
           I+KS SM NL       +D     A G G   A    D   L+ G    ++R+   ERKK
Sbjct: 48  IKKSSSMPNL-----TSIDPLPVPADG-GKRRA---SDDSELASGQ-QKRRRRKVQERKK 107

Query: 108 GKPWSEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKR 167
           G PW+EEEH+ FL GL++LGKGDWRGISKNFVT+RT TQVASHAQKYFLR+ N   KKKR
Sbjct: 108 GVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPG-KKKR 163

Query: 168 RASLFDM 175
           RASLFD+
Sbjct: 168 RASLFDV 163

[Close]

BLAST of MS000272 vs. ExPASy TrEMBL
Match: A0A6J1CH76 (probable transcription factor At5g61620 OS=Momordica charantia OX=3673 GN=LOC111011622 PE=4 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 9.2e-174
Identity = 320/357 (89.64%), Postives = 325/357 (91.04%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHA 60
           MVRESPRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHA
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHA 60

Query: 61  CNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTFL 120
           CNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTFL
Sbjct: 61  CNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTFL 120

Query: 121 AGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDMPEITK- 180
           AGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDMPEITK 
Sbjct: 121 AGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDMPEITKN 180

Query: 181 -------VRSNQTVFGNNQNHFCHCQNYSLSIDHQVNNLPTQLINRFPHLCLDSPHFVPP 240
                       +   + ++        S     QVNNLPTQLINRFPHLCLDSPHFVPP
Sbjct: 181 NIVVPQDCNKASSSMSSGESSQILLPKISSENQQQVNNLPTQLINRFPHLCLDSPHFVPP 240

Query: 241 AAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSSNPNATLISHPSGIPPSPRS 300
           AAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSS+PNATLISHPSGIPPSPRS
Sbjct: 241 AAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSSSPNATLISHPSGIPPSPRS 300

Query: 301 SPHRTTTATKLELQLQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAIRVI 350
           SPHRTTTATKLE  LQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAIRVI
Sbjct: 301 SPHRTTTATKLE--LQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAIRVI 355

[Close]

BLAST of MS000272 vs. ExPASy TrEMBL
Match: A0A6J1J8B3 (probable transcription factor At5g61620 OS=Cucurbita maxima OX=3661 GN=LOC111483484 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 7.2e-126
Identity = 264/377 (70.03%), Postives = 287/377 (76.13%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNN-------YCVKLFGVNLMENNDESIRKSLS 60
           MVRESPRKCSHCGLNGHNSRTCSNF KGNN       YCVKLFGVNLMEN DES+RKSLS
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFLKGNNNYSNSSYYCVKLFGVNLMENRDESMRKSLS 60

Query: 61  MGNL-IHACNNGVDHNNAAAAGAGAN----NAGAGDDGGYLSDGLIHNKKRKAAHERKKG 120
           MGNL +H+CNN +D N AAA  A  N    N+ + D+ GYLSDG IHNK+RKAAHERKKG
Sbjct: 61  MGNLNLHSCNNVLDLNTAAAVAAVNNVADDNSASADNAGYLSDGFIHNKRRKAAHERKKG 120

Query: 121 KPWSEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRR 180
           KPW+EEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKRR
Sbjct: 121 KPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRR 180

Query: 181 ASLFDMPEITKVRSNQTVFGNNQNHFCHC-------QNYSLSIDHQVNNLPTQLINRFPH 240
           ASLFDMPEI           NN    C         +N +     QVNNLP QLINRFPH
Sbjct: 181 ASLFDMPEIK----------NNVPQDCQASGETSLPKNNNSENQRQVNNLPAQLINRFPH 240

Query: 241 LCLDSPHFVPPA---AASGVANLHGIPYVVGVSPNVPIIPLVNI--GGSVMTVGKS-SNP 300
           LCLD+PHFVPPA   AAS  ANLHGIPYVVGVSPNVPI+PLVNI  GG VM + KS  +P
Sbjct: 241 LCLDAPHFVPPATGSAASAAANLHGIPYVVGVSPNVPILPLVNIGRGGGVMAMPKSPRSP 300

Query: 301 NATLISHPSGIPPSPRSSPHRTTTATKLELQLQ---LQLQPSGFEASDALELKIGLPQSP 350
           NA +  HPSGIPPSPR+SP R      +  QLQ   + +  S FEA DALELKIGLPQSP
Sbjct: 301 NAPMAGHPSGIPPSPRTSPSR-----PILQQLQPSAIAVAASNFEA-DALELKIGLPQSP 360

[Close]

BLAST of MS000272 vs. ExPASy TrEMBL
Match: A0A6J1JM29 (probable transcription factor At5g61620 OS=Cucurbita maxima OX=3661 GN=LOC111486425 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.6e-125
Identity = 267/373 (71.58%), Postives = 289/373 (77.48%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKG---NNYCVKLFGVNLMENNDESIRKSLSMGNL 60
           MVRESPRKCSHCGLNGHNSRTCSNFAKG   NNYCVKLFGVNLM+N DES+RKSLSMGNL
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDESMRKSLSMGNL 60

Query: 61  -IHACNNGVDHNNAAAAG--AGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEE 120
            IH CN     +NAAAAG      NA  GD+GGYLSDGLIHNKKRKAA ERKKGKPW+EE
Sbjct: 61  NIHVCN-----HNAAAAGNNVACYNAAVGDEGGYLSDGLIHNKKRKAALERKKGKPWTEE 120

Query: 121 EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 180
           EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD+
Sbjct: 121 EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDI 180

Query: 181 PEITK------VRSNQTVFGNNQNHFCHCQNYSLSIDHQVNNLPTQLINRFPHLCLDSPH 240
           PEI          S+ ++  N +         S     QV+NLPTQLINRFPHLCLD+PH
Sbjct: 181 PEIKNNVSQECQASSSSMRANGETSQILLPKNSSENQQQVSNLPTQLINRFPHLCLDTPH 240

Query: 241 FVPP---AAASGVANLHGIPYVVGVSP-NVPIIPLVNIG---GSVMTVGKS----SNPN- 300
           FVP    + ASGVANLHGIPYVVGVSP NVPIIPLVN+G    +VM + KS    S+PN 
Sbjct: 241 FVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVNLGRRSSAVMAMPKSPIRTSSPNA 300

Query: 301 ATLISHPSGIPPSPRSSPHRTTTATKLELQLQLQLQPSGFEASDALELKIGLPQSPQPKN 350
           A L++HPSGIPPSPRSSP R      L +QLQ     + FE +DALELKIGLPQSPQ KN
Sbjct: 301 AALVAHPSGIPPSPRSSPQR-----PLMMQLQASAMAASFE-TDALELKIGLPQSPQAKN 360

[Close]

BLAST of MS000272 vs. ExPASy TrEMBL
Match: A0A6J1E4T8 (probable transcription factor At5g61620 OS=Cucurbita moschata OX=3662 GN=LOC111430782 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 4.6e-125
Identity = 264/380 (69.47%), Postives = 286/380 (75.26%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNN-------YCVKLFGVNLMENNDESIRKSLS 60
           MVRESPRKCSHCGLNGHNSRTCSNF KGNN       YCVKLFGVNLMEN DES+RKSLS
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFLKGNNNYSNSSYYCVKLFGVNLMENRDESMRKSLS 60

Query: 61  MGNL-IHACNNGVDHNNAAAAGAGAN-----NAGAGDDGGYLSDGLIHNKKRKAAHERKK 120
           MGNL +H+CNN +D N AAAA A  N     N+ + D+ GYLSDG IHNK+RKAAHERKK
Sbjct: 61  MGNLNLHSCNNVLDLNTAAAAAAAVNNVADDNSASADNAGYLSDGFIHNKRRKAAHERKK 120

Query: 121 GKPWSEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKR 180
           GKPW+EEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKR
Sbjct: 121 GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 180

Query: 181 RASLFDMPEITKVRSNQTVFGNNQNHFCHC-------QNYSLSIDHQVNNLPTQLINRFP 240
           RASLFDMPEI           NN    C         +N S     QVNNLP QLINRFP
Sbjct: 181 RASLFDMPEIK----------NNVPQDCQASGETSLPKNNSSENQQQVNNLPAQLINRFP 240

Query: 241 HLCLDSPHFVPPA---AASGVANLHGIPYVVGVSPNVPIIPLVNI----GGSVMTVGKS- 300
           HLCLD+P FVPPA   AAS  ANLHGIPYVVGVSPNVPI+PLVNI    GG VM + KS 
Sbjct: 241 HLCLDAPQFVPPATGSAASAAANLHGIPYVVGVSPNVPILPLVNIGRRGGGGVMAMPKSP 300

Query: 301 SNPNATLISHPSGIPPSPRSSPHRTTTATKLELQLQ---LQLQPSGFEASDALELKIGLP 350
            +PNA +  HPSGIPPSPR+SP R      +  QLQ   + +  S FEA DALELKIGLP
Sbjct: 301 RSPNAPMAGHPSGIPPSPRTSPSR-----PILQQLQPSAIAVAASNFEA-DALELKIGLP 360

[Close]

BLAST of MS000272 vs. ExPASy TrEMBL
Match: A0A6J1FVF1 (probable transcription factor At5g61620 OS=Cucurbita moschata OX=3662 GN=LOC111447646 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 5.1e-124
Identity = 266/377 (70.56%), Postives = 287/377 (76.13%), Query Frame = 0


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKG---NNYCVKLFGVNLMENNDESIRKSLSMGNL 60
           MVRESPRKCSHCGLNGHNSRTCSNFAKG   NNYCVKLFGVNLM+N DES+RKSLSMGNL
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDESMRKSLSMGNL 60

Query: 61  -IHACNNGVDHNNAAAAG--AGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEE 120
            IH CN     +NAAAAG      NA   DDGGYLSDGLIHNKKRKAA ERKKGKPW+EE
Sbjct: 61  NIHVCN-----HNAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTEE 120

Query: 121 EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 180
           EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD+
Sbjct: 121 EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDI 180

Query: 181 PEITK------VRSNQTVFGNNQNHFCHCQNYSLSIDHQVNNLPTQLINRFPHLCLDSPH 240
           PEI          S+ ++  N +         S     QV+NLPTQLINRFPHLCLD+PH
Sbjct: 181 PEIKNNVSQECQASSSSMRANGETSQILLPKNSSENQQQVSNLPTQLINRFPHLCLDTPH 240

Query: 241 FVPP---AAASGVANLHGIPYVVGVSP-NVPIIPLVNIG---GSVMTVGKS----SNPN- 300
           FVP    + ASGVANLHGIPYVVGVSP NVPIIPLV +G    +VM + KS    S+PN 
Sbjct: 241 FVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPKSPIRTSSPNA 300

Query: 301 ----ATLISHPSGIPPSPRSSPHRTTTATKLELQLQLQLQPSGFEASDALELKIGLPQSP 350
               A L++HPSGIPPSPRSSP R      L +QLQ     + FE +DALELKIGLPQSP
Sbjct: 301 AAAAAALVAHPSGIPPSPRSSPQR-----PLMVQLQASAMAASFE-TDALELKIGLPQSP 360

[Close]

BLAST of MS000272 vs. TAIR 10
Match: AT5G61620.1 (myb-like transcription factor family protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-49
Identity = 152/362 (41.99%), Postives = 194/362 (53.59%), Query Frame = 0


Query: 1   MVRES---PRKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMEN-----NDESIRKSL 60
           MV+E+    + CSHCG NGHN+RTC N    N   VKLFGVN+  +        ++RKSL
Sbjct: 1   MVKETVTVAKTCSHCGHNGHNARTCLNGV--NKASVKLFGVNISSDPIRPPEVTALRKSL 60

Query: 61  SMGNLIHACNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWS 120
           S+GNL     N  D +N    G+G +   A DD GY SDG IH+KK K AHE+KKGKPW+
Sbjct: 61  SLGNLDALLAN--DESN----GSG-DPIAAVDDTGYHSDGQIHSKKGKTAHEKKKGKPWT 120

Query: 121 EEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLF 180
           EEEHR FL GL KLGKGDWRGI+K+FV+TRTPTQVASHAQKYF+R +N NDK+KRRASLF
Sbjct: 121 EEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIR-LNVNDKRKRRASLF 180

Query: 181 DM---PEITKVRSNQTVFGNNQNHFCHCQNYSLSIDHQV--NNLPTQLINRFPHLCLDSP 240
           D+    +  K R++Q             +     I   V   +  T++ NRF +L ++  
Sbjct: 181 DISLEDQKEKERNSQDASTKTPP-----KQPITGIQQPVVQGHTQTEISNRFQNLSMEYM 240

Query: 241 HFVPPAAASGVANLHGIPYVVGVSPNVPIIPLVNIGGSVMTVGKSSNPNATL-ISHPSGI 300
               P     +   +  P ++   PN P+                +NP   +   HPSGI
Sbjct: 241 PIYQP-----IPPYYNFPPIM-YHPNYPMY--------------YANPQVPVRFVHPSGI 300

Query: 301 PPSPRSSPHRTTTATKLELQLQLQLQPSGFEASDALELKIGLPQSPQPKNLSSHTSGGAI 349
            P PR  P        + L L    + S     D L+L IGLP  PQ    S  T  G I
Sbjct: 301 -PVPRHIP--------IGLPLSQPSEASNMTNKDGLDLHIGLP--PQATGASDLTGHGVI 316

[Close]

BLAST of MS000272 vs. TAIR 10
Match: AT5G47390.1 (myb-like transcription factor family protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-40
Identity = 98/175 (56.00%), Postives = 118/175 (67.43%), Query Frame = 0


Query: 7   RKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNLIHACNNGVD 66
           R+CSHC  NGHNSRTC N  +G    VKLFGV L E    SIRKS SMGNL H   +G  
Sbjct: 3   RRCSHCNHNGHNSRTCPN--RG----VKLFGVRLTEG---SIRKSASMGNLSHYTGSG-- 62

Query: 67  HNNAAAAGAGANNAGAGDD-------GGYLSDGLIHNKKRKAAHERKKGKPWSEEEHRTF 126
              +   G G+N  G+  D        GY S+  +      ++ ERKKG PW+EEEHR F
Sbjct: 63  ---SGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGS--SSSRERKKGTPWTEEEHRMF 122

Query: 127 LAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 175
           L GL+KLGKGDWRGIS+N+VTTRTPTQVASHAQKYF+R+ N + ++KRR+SLFDM
Sbjct: 123 LLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVS-RRKRRSSLFDM 160

[Close]

BLAST of MS000272 vs. TAIR 10
Match: AT1G70000.1 (myb-like transcription factor family protein )

HSP 1 Score: 155.6 bits (392), Expect = 7.3e-38
Identity = 91/177 (51.41%), Postives = 109/177 (61.58%), Query Frame = 0


Query: 7   RKCSHCGLNGHNSRTC---------SNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNL 66
           R CS CG NGHNSRTC         +N   G    + LFGV + E +    RKS+SM NL
Sbjct: 3   RSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSMNNL 62

Query: 67  IHACNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHR 126
               +   D N               DDGGY SD ++H   R    ERK+G PW+EEEHR
Sbjct: 63  -SQFDQTPDPNPT-------------DDGGYASDDVVHASGRN--RERKRGTPWTEEEHR 122

Query: 127 TFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 175
            FL GL K+GKGDWRGIS+NFV TRTPTQVASHAQKYFLR+ N N +++RR+SLFD+
Sbjct: 123 LFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQN-RRRRRSSLFDI 162

[Close]

BLAST of MS000272 vs. TAIR 10
Match: AT1G70000.2 (myb-like transcription factor family protein )

HSP 1 Score: 155.6 bits (392), Expect = 7.3e-38
Identity = 91/177 (51.41%), Postives = 109/177 (61.58%), Query Frame = 0


Query: 7   RKCSHCGLNGHNSRTC---------SNFAKGNNYCVKLFGVNLMENNDESIRKSLSMGNL 66
           R CS CG NGHNSRTC         +N   G    + LFGV + E +    RKS+SM NL
Sbjct: 3   RSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSMNNL 62

Query: 67  IHACNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEEEHR 126
               +   D N               DDGGY SD ++H   R    ERK+G PW+EEEHR
Sbjct: 63  -SQFDQTPDPNPT-------------DDGGYASDDVVHASGRN--RERKRGTPWTEEEHR 122

Query: 127 TFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 175
            FL GL K+GKGDWRGIS+NFV TRTPTQVASHAQKYFLR+ N N +++RR+SLFD+
Sbjct: 123 LFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQN-RRRRRSSLFDI 162

[Close]

BLAST of MS000272 vs. TAIR 10
Match: AT5G56840.1 (myb-like transcription factor family protein )

HSP 1 Score: 149.4 bits (376), Expect = 5.2e-36
Identity = 90/191 (47.12%), Postives = 111/191 (58.12%), Query Frame = 0


Query: 7   RKCSHCGLNGHNSRTCSNFAKGNNYCVKLFGVNLMENNDE------------SIRKSLSM 66
           R+CSHCG  GHNSRTCS++       V+LFGV+L   +              +I+KS SM
Sbjct: 3   RRCSHCGNVGHNSRTCSSY---QTRVVRLFGVHLDTTSSSPPPPPPPSILAAAIKKSFSM 62

Query: 67  GNLIHACNNGVDHNNAAAAGAGANNAGAGDDGGYLSDGLIHNKKRKAAHERKKGKPWSEE 126
            + + AC                 ++ +    GYLSDGL H        +RKKG PW+ E
Sbjct: 63  -DCLPAC-----------------SSSSSSFAGYLSDGLAHK-----TPDRKKGVPWTAE 122

Query: 127 EHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDM 186
           EHRTFL GL+KLGKGDWRGIS+NFV T++PTQVASHAQKYFLR+      K+RR SLFDM
Sbjct: 123 EHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHHKRRRTSLFDM 167

The following BLAST results are available for this feature:

BLAST of MS000272 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141165.1	1.9e-173	89.64	probable transcription factor At5g61620 [Momordica charantia]	[more]
XP_022985491.1	1.5e-125	70.03	probable transcription factor At5g61620 [Cucurbita maxima]	[more]
XP_022989335.1	3.3e-125	71.58	probable transcription factor At5g61620 [Cucurbita maxima]	[more]
XP_022922957.1	9.6e-125	69.47	probable transcription factor At5g61620 [Cucurbita moschata]	[more]
XP_023553250.1	2.1e-124	69.68	probable transcription factor At5g61620 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS000272 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKF9	2.6e-48	41.99	Probable transcription factor At5g61620 OS=Arabidopsis thaliana OX=3702 GN=At5g6...	[more]
Q9LVS0	2.2e-39	56.00	Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1	[more]
Q7XC57	4.6e-37	55.95	Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=...	[more]
Q2V9B0	1.4e-25	48.61	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
B8BI93	4.5e-24	56.69	Transcription factor MYBS2 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS2 PE=3 ...	[more]

BLAST of MS000272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CH76	9.2e-174	89.64	probable transcription factor At5g61620 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1J8B3	7.2e-126	70.03	probable transcription factor At5g61620 OS=Cucurbita maxima OX=3661 GN=LOC111483...	[more]
A0A6J1JM29	1.6e-125	71.58	probable transcription factor At5g61620 OS=Cucurbita maxima OX=3661 GN=LOC111486...	[more]
A0A6J1E4T8	4.6e-125	69.47	probable transcription factor At5g61620 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1FVF1	5.1e-124	70.56	probable transcription factor At5g61620 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of MS000272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61620.1	1.8e-49	41.99	myb-like transcription factor family protein	[more]
AT5G47390.1	1.6e-40	56.00	myb-like transcription factor family protein	[more]
AT1G70000.1	7.3e-38	51.41	myb-like transcription factor family protein	[more]
AT1G70000.2	7.3e-38	51.41	myb-like transcription factor family protein	[more]
AT5G56840.1	5.2e-36	47.12	myb-like transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 107..157 e-value: 1.3E-11 score: 54.6
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 103..155 score: 7.653979
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 110..155 e-value: 5.54796E-10 score: 52.1926
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 106..158 e-value: 8.5E-17 score: 59.2
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 109..154 e-value: 2.0E-11 score: 43.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 103..159 score: 19.710728
None	No IPR available	GENE3D	1.10.10.60		coord: 109..159 e-value: 4.1E-14 score: 54.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..349
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 1..344
None	No IPR available	PANTHER	PTHR44191:SF29	SUBFAMILY NOT NAMED	coord: 1..344
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 106..159 score: 9.015114
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 105..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000272.1	MS000272.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding