MS000243 (gene) Bitter gourd (TR) v1

Overview


Name	MS000243
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribonuclease T(2)
Location	scaffold44: 137364 .. 138540 (+)
RNA-Seq Expression	MS000243
Synteny	MS000243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCATGGAACCTGCGCAGCTCCGGTAATCAAGGGCCAATTTGAGTACTTCATCGAAGCCATCACCCTTTACACCAAATACGATGTCACCGTAAGCTTTTATAAAACCGCTCTCTATTCAACGGACTATTTGGTGTGTCGCTTCATCCTCGATCATCACACCCATCCAGACCCATCCTTCTATAAATTGGATTGAATATGAATTTTATTTTTAAAATGGATCAATCTAGGTCGTATTTTGATTGGTCCATTGGACTTGCATAAACACAACATATATATTGAATAATTATATACCTACATAAATACATATAATTATATATAATTGATTAGTTTTTAGTAGGGTTATTTATTGTCATTTCTATTTTTCTGATGAATTTTTTTCTTTATATTAATATAGTAAAGAAATATAAATGTAATTTTCAAAAAGTAACCCAATACAATTTATTCTTTTAACAAATAAGATGAGGCAAGAATATGATACAACAAAATTTATAATCTTTAAAAAAAGAATAAAATAAAAACACAAATTCTAATACTAAAAAAAACTTAATTTGAATAAATACTAAAATAAATTTTATAAATTAAAAAAGAATTTATTATATTGCCAATTTAATTATTTATTCTCACAAATGCATAAAGGAAAGTATATAAAATTGATCAAATAGTTGCCGTTTTTTCAATACGGGTAGGCGTAGGAAGACGCCTACTTATAAACACCTAAGATACCTTCTCTTCTATTATTTTCTAGATGTTTTTTCTCAATAATATTATCAGTATTCGTCCTTCTTGCTATTCACTACTAAAAATTTTACAGTTTTTTTTTTTTTTTTTGTTATCGTCTTAAGTATTTTTCTTTCCTACTAGTCAAAAATTAAAAATTTAACGGTGGCCGGCGCCAACAATTAAGCATGTGCATATGAACACGTAATTTTTCCTTTTTCTTTTCCTCTCTATTTGTGATGGGTTAAGACTTTGGTGCATAACATTTATAAAAGGTTTTGTTATTTGTTACCCATCAGAAAGTTTTGAATGATGCTGGAATTGTAGCTTCTGTTGCTCCATATCCTATTATGTACATCTTGGATGAACTTCGGAGGGTTTTCCATGCAATGCCAAAGATTACATGTGCTGAAGATGGAGTTGTCAAGGAACTCTGGCTATGCTTTGACAAAGATTTT

mRNA sequence

AAGCATGGAACCTGCGCAGCTCCGGTAATCAAGGGCCAATTTGAGTACTTCATCGAAGCCATCACCCTTTACACCAAATACGATGTCACCAAAGTTTTGAATGATGCTGGAATTGTAGCTTCTGTTGCTCCATATCCTATTATGTACATCTTGGATGAACTTCGGAGGGTTTTCCATGCAATGCCAAAGATTACATGTGCTGAAGATGGAGTTGTCAAGGAACTCTGGCTATGCTTTGACAAAGATTTT

Coding sequence (CDS)

AAGCATGGAACCTGCGCAGCTCCGGTAATCAAGGGCCAATTTGAGTACTTCATCGAAGCCATCACCCTTTACACCAAATACGATGTCACCAAAGTTTTGAATGATGCTGGAATTGTAGCTTCTGTTGCTCCATATCCTATTATGTACATCTTGGATGAACTTCGGAGGGTTTTCCATGCAATGCCAAAGATTACATGTGCTGAAGATGGAGTTGTCAAGGAACTCTGGCTATGCTTTGACAAAGATTTT

Protein sequence

KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVFHAMPKITCAEDGVVKELWLCFDKDF

Homology

[Close]

BLAST of MS000243 vs. NCBI nr
Match: XP_022140987.1 (ribonuclease 2-like [Momordica charantia])

HSP 1 Score: 169.1 bits (427), Expect = 1.6e-38
Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVFHA 60
           KHGTCAAP+IKGQ+EYF +A TLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRR FHA
Sbjct: 141 KHGTCAAPIIKGQYEYFTKATTLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRAFHA 200

Query: 61  MPKITCAEDGVVKELWLCFDKDF 84
           MPKITCAEDGVVKE+WLCFDKDF
Sbjct: 201 MPKITCAEDGVVKEIWLCFDKDF 223

[Close]

BLAST of MS000243 vs. NCBI nr
Match: XP_038876700.1 (ribonuclease 2-like [Benincasa hispida])

HSP 1 Score: 115.2 bits (287), Expect = 2.8e-22
Identity = 50/84 (59.52%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVAS-VAPYPIMYILDELRRVFH 60
           KHGTCAAPVI G+++YF+  +T+++KY+VTKVLNDAG VAS    YPI  ++  ++  F+
Sbjct: 142 KHGTCAAPVIVGEYDYFLTTLTIFSKYNVTKVLNDAGFVASNTEKYPIEDVVAAIKNEFN 201

Query: 61  AMPKITCAEDGVVKELWLCFDKDF 84
           + PKITCA+ GVVKELW+CFDK F
Sbjct: 202 STPKITCAKKGVVKELWICFDKSF 225

[Close]

BLAST of MS000243 vs. NCBI nr
Match: XP_022140985.1 (ribonuclease 2-like [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20
Identity = 49/84 (58.33%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVAS-VAPYPIMYILDELRRVFH 60
           KHGTCAAPVI G+F+YF+  +T+++KY+VTKVLNDAG VAS    Y +  ++  ++  F+
Sbjct: 143 KHGTCAAPVIVGEFDYFLTTLTIFSKYNVTKVLNDAGFVASDTEKYALGDVVAAVQDAFN 202

Query: 61  AMPKITCAEDGVVKELWLCFDKDF 84
           A PKI+CA+ G VKELWLCFDK F
Sbjct: 203 ATPKISCAKKGAVKELWLCFDKTF 226

[Close]

BLAST of MS000243 vs. NCBI nr
Match: XP_022922895.1 (ribonuclease 2-like [Cucurbita moschata])

HSP 1 Score: 109.0 bits (271), Expect = 2.0e-20
Identity = 46/84 (54.76%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVAS-VAPYPIMYILDELRRVFH 60
           KHGTCAAPVI G+F+YF+  +T+++KY+VTK L+DAG VAS    YP+  ++D ++   +
Sbjct: 142 KHGTCAAPVIVGEFDYFLTTLTIFSKYNVTKALSDAGFVASNTEKYPLEDVVDAVKNATN 201

Query: 61  AMPKITCAEDGVVKELWLCFDKDF 84
           + PKI+CA+ G VKELW+CFDK F
Sbjct: 202 STPKISCAKKGAVKELWICFDKKF 225

[Close]

BLAST of MS000243 vs. NCBI nr
Match: XP_008462866.1 (PREDICTED: ribonuclease 2-like [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 2.0e-20
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVAS-VAPYPIMYILDELRRVFH 60
           KHGTCAAPV+ G+++YF+ A+T+++KY+VTKVL++ G VAS    YPI  ++  ++  F+
Sbjct: 140 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 199

Query: 61  -AMPKITCAEDGVVKELWLCFDKDF 84
            A PKITCA+ GVVKELWLCFDK F
Sbjct: 200 NATPKITCAKKGVVKELWLCFDKSF 224

[Close]

BLAST of MS000243 vs. ExPASy Swiss-Prot
Match: P42814 (Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVA-PYPIMYILDELRRVFH 60
           KHGTC++PV   ++ YF+  + LY K++VT VL  AG VAS +  YP+  I+  ++  FH
Sbjct: 132 KHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFH 191

Query: 61  AMPKITCAEDGVVKELWLCFDKDF 84
             P++ C  D  + E+ +CF KDF
Sbjct: 192 ITPEVVCKRD-AIDEIRICFYKDF 214

[Close]

BLAST of MS000243 vs. ExPASy Swiss-Prot
Match: C0HKG5 (Ribonuclease T2-A OS=Mus musculus OX=10090 GN=Rnaset2a PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.9e-08
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1   KHGTCAAPV--IKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVF 60
           KHGTCAA V  +  + +YF +++ LY + D+  VL   GI  S+  Y +    D L R++
Sbjct: 121 KHGTCAAQVDALNSEKKYFGKSLDLYKQIDLNSVLQKFGIKPSINYYQLADFKDALTRIY 180

Query: 61  HAMPKITC--AEDG----VVKELWLCFDKD 83
             +PKI C   E G     V ++ LCF K+
Sbjct: 181 GVVPKIQCLMPEQGESVQTVGQIELCFTKE 210

[Close]

BLAST of MS000243 vs. ExPASy Swiss-Prot
Match: C0HKG6 (Ribonuclease T2-B OS=Mus musculus OX=10090 GN=Rnaset2b PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.9e-08
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 1   KHGTCAAPV--IKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVF 60
           KHGTCAA V  +  + +YF +++ LY + D+  VL   GI  S+  Y +    D L R++
Sbjct: 121 KHGTCAAQVDALNSEKKYFGKSLDLYKQIDLNSVLQKFGIKPSINYYQLADFKDALTRIY 180

Query: 61  HAMPKITC--AEDG----VVKELWLCFDKD 83
             +PKI C   E G     V ++ LCF K+
Sbjct: 181 GVVPKIQCLMPEQGESVQTVGQIELCFTKE 210

[Close]

BLAST of MS000243 vs. ExPASy Swiss-Prot
Match: O00584 (Ribonuclease T2 OS=Homo sapiens OX=9606 GN=RNASET2 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 4.5e-07
Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0


Query: 1   KHGTCAAPV--IKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVF 60
           KHGTCAA V  +  Q +YF  ++ LY + D+  VL   GI  S+  Y +    D L RV+
Sbjct: 117 KHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDALARVY 176

Query: 61  HAMPKITC------AEDGVVKELWLCFDK 82
             +PKI C       E   + ++ LC  K
Sbjct: 177 GVIPKIQCLPPSQDEEVQTIGQIELCLTK 205

[Close]

BLAST of MS000243 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 9.3e-05
Identity = 28/85 (32.94%), Postives = 41/85 (48.24%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVFHA 60
           KHGTC+  VI  Q EYF  A+ L  K ++   L  AGI      Y +  I D ++     
Sbjct: 122 KHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGF 181

Query: 61  MPKITCAEDG----VVKELWLCFDK 82
            P + C  DG     + +++LC D+
Sbjct: 182 TPWVECNRDGSGNSQLYQVYLCVDR 205

[Close]

BLAST of MS000243 vs. ExPASy TrEMBL
Match: A0A6J1CIK8 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011506 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 7.9e-39
Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVFHA 60
           KHGTCAAP+IKGQ+EYF +A TLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRR FHA
Sbjct: 141 KHGTCAAPIIKGQYEYFTKATTLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRAFHA 200

Query: 61  MPKITCAEDGVVKELWLCFDKDF 84
           MPKITCAEDGVVKE+WLCFDKDF
Sbjct: 201 MPKITCAEDGVVKEIWLCFDKDF 223

[Close]

BLAST of MS000243 vs. ExPASy TrEMBL
Match: A0A6J1CGP7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011504 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.7e-21
Identity = 49/84 (58.33%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVAS-VAPYPIMYILDELRRVFH 60
           KHGTCAAPVI G+F+YF+  +T+++KY+VTKVLNDAG VAS    Y +  ++  ++  F+
Sbjct: 143 KHGTCAAPVIVGEFDYFLTTLTIFSKYNVTKVLNDAGFVASDTEKYALGDVVAAVQDAFN 202

Query: 61  AMPKITCAEDGVVKELWLCFDKDF 84
           A PKI+CA+ G VKELWLCFDK F
Sbjct: 203 ATPKISCAKKGAVKELWLCFDKTF 226

[Close]

BLAST of MS000243 vs. ExPASy TrEMBL
Match: A0A5D3E236 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00240 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.6e-21
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVAS-VAPYPIMYILDELRRVFH 60
           KHGTCAAPV+ G+++YF+ A+T+++KY+VTKVL++ G VAS    YPI  ++  ++  F+
Sbjct: 122 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 181

Query: 61  -AMPKITCAEDGVVKELWLCFDKDF 84
            A PKITCA+ GVVKELWLCFDK F
Sbjct: 182 NATPKITCAKKGVVKELWLCFDKSF 206

[Close]

BLAST of MS000243 vs. ExPASy TrEMBL
Match: A0A5A7V3T6 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00520 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.6e-21
Identity = 49/85 (57.65%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVAS-VAPYPIMYILDELRRVFH 60
           KHGTCAAPV+ G+++YF+ A+T+++KY+VTKVL++ G VAS    YPI  ++  ++  F+
Sbjct: 138 KHGTCAAPVLVGEYDYFLTALTIFSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFY 197

Query: 61  -AMPKITCAEDGVVKELWLCFDKDF 84
            A PKITCA+ GVVKELWLCFDK F
Sbjct: 198 NATPKITCAKKGVVKELWLCFDKSF 222

[Close]

BLAST of MS000243 vs. ExPASy TrEMBL
Match: A0A6J1EA39 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111430737 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.6e-21
Identity = 46/84 (54.76%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVAS-VAPYPIMYILDELRRVFH 60
           KHGTCAAPVI G+F+YF+  +T+++KY+VTK L+DAG VAS    YP+  ++D ++   +
Sbjct: 142 KHGTCAAPVIVGEFDYFLTTLTIFSKYNVTKALSDAGFVASNTEKYPLEDVVDAVKNATN 201

Query: 61  AMPKITCAEDGVVKELWLCFDKDF 84
           + PKI+CA+ G VKELW+CFDK F
Sbjct: 202 STPKISCAKKGAVKELWICFDKKF 225

[Close]

BLAST of MS000243 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 77.0 bits (188), Expect = 7.8e-15
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVA-PYPIMYILDELRRVFH 60
           KHGTC++PV   ++ YF+  + LY K++VT VL  AG VAS +  YP+  I+  ++  FH
Sbjct: 132 KHGTCSSPVFHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFH 191

Query: 61  AMPKITCAEDGVVKELWLCFDKDF 84
             P++ C  D  + E+ +CF KDF
Sbjct: 192 ITPEVVCKRD-AIDEIRICFYKDF 214

[Close]

BLAST of MS000243 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 47.4 bits (111), Expect = 6.6e-06
Identity = 28/85 (32.94%), Postives = 41/85 (48.24%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVFHA 60
           KHGTC+  VI  Q EYF  A+ L  K ++   L  AGI      Y +  I D ++     
Sbjct: 122 KHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGF 181

Query: 61  MPKITCAEDG----VVKELWLCFDK 82
            P + C  DG     + +++LC D+
Sbjct: 182 TPWVECNRDGSGNSQLYQVYLCVDR 205

[Close]

BLAST of MS000243 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 41.2 bits (95), Expect = 4.8e-04
Identity = 24/84 (28.57%), Postives = 43/84 (51.19%), Query Frame = 0


Query: 1   KHGTCAAPVIKGQFEYFIEAITLYTKYDVTKVLNDAGIVASVAPYPIMYILDELRRVFHA 60
           KHGTC+  V+  Q EYF  A+ L  K ++ ++L ++GI      Y +  I + ++     
Sbjct: 120 KHGTCSESVM-DQHEYFENALKLKQKANLLQILKNSGINPDDGFYNLDKITNAIKDGIGF 179

Query: 61  MPKITCAED----GVVKELWLCFD 81
            P I C +D      + ++++C D
Sbjct: 180 TPGIECNKDPERNAQLHQIYICVD 202

The following BLAST results are available for this feature:

BLAST of MS000243 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140987.1	1.6e-38	91.57	ribonuclease 2-like [Momordica charantia]	[more]
XP_038876700.1	2.8e-22	59.52	ribonuclease 2-like [Benincasa hispida]	[more]
XP_022140985.1	1.2e-20	58.33	ribonuclease 2-like [Momordica charantia]	[more]
XP_022922895.1	2.0e-20	54.76	ribonuclease 2-like [Cucurbita moschata]	[more]
XP_008462866.1	2.0e-20	57.65	PREDICTED: ribonuclease 2-like [Cucumis melo]	[more]

BLAST of MS000243 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42814	1.1e-13	41.67	Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1	[more]
C0HKG5	6.9e-08	36.67	Ribonuclease T2-A OS=Mus musculus OX=10090 GN=Rnaset2a PE=1 SV=1	[more]
C0HKG6	6.9e-08	36.67	Ribonuclease T2-B OS=Mus musculus OX=10090 GN=Rnaset2b PE=1 SV=1	[more]
O00584	4.5e-07	35.96	Ribonuclease T2 OS=Homo sapiens OX=9606 GN=RNASET2 PE=1 SV=2	[more]
P42813	9.3e-05	32.94	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]

BLAST of MS000243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CIK8	7.9e-39	91.57	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011506 PE=3 SV=1	[more]
A0A6J1CGP7	5.7e-21	58.33	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011504 PE=3 SV=1	[more]
A0A5D3E236	9.6e-21	57.65	Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00...	[more]
A0A5A7V3T6	9.6e-21	57.65	Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00...	[more]
A0A6J1EA39	9.6e-21	54.76	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111430737 PE=3 SV=1	[more]

BLAST of MS000243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39780.1	7.8e-15	41.67	ribonuclease 2	[more]
AT2G02990.1	6.6e-06	32.94	ribonuclease 1	[more]
AT1G14220.1	4.8e-04	28.57	Ribonuclease T2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 1..82 e-value: 9.5E-16 score: 58.5
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 1..83
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 1..83 e-value: 1.9E-21 score: 79.0
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 1..83
None	No IPR available	PANTHER	PTHR11240:SF51	RIBONUCLEASE 2	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000243.1	MS000243.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding