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MS000171 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGATTCAGCATACACATTACAGGCCACATCTCGTATCGTTCAATGGAGGATCTGCACCTACAGCAATTCTGATCCTTTCAAAATTGGAAACTGGAATCGGTGGTTCGTGTGTATA ATGAGCGATTCAGCATACACATTACAGGCCACATCTCGTATCGTTCAATGGAGGATCTGCACCTACAGCAATTCTGATCCTTTCAAAATTGGAAACTGGAATCGGTGGTTCGTGTGTATA ATGAGCGATTCAGCATACACATTACAGGCCACATCTCGTATCGTTCAATGGAGGATCTGCACCTACAGCAATTCTGATCCTTTCAAAATTGGAAACTGGAATCGGTGGTTCGTGTGTATA MSDSAYTLQATSRIVQWRICTYSNSDPFKIGNWNRWFVCI Homology
BLAST of MS000171 vs. NCBI nr
Match: XP_022139591.1 (BTB/POZ domain-containing protein At1g55760 [Momordica charantia]) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MS000171 vs. NCBI nr
Match: XP_042501940.1 (BTB/POZ domain-containing protein At1g55760-like [Macadamia integrifolia]) HSP 1 Score: 59.7 bits (143), Expect = 6.7e-06 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MS000171 vs. NCBI nr
Match: XP_010252868.1 (PREDICTED: BTB/POZ domain-containing protein At1g55760-like [Nelumbo nucifera]) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05 Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0
BLAST of MS000171 vs. NCBI nr
Match: XP_006586164.1 (BTB/POZ domain-containing protein At1g55760 isoform X2 [Glycine max] >KRH46502.1 hypothetical protein GLYMA_08G337900v4 [Glycine max]) HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05 Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 0
BLAST of MS000171 vs. NCBI nr
Match: KAG5002176.1 (hypothetical protein JHK87_023248 [Glycine soja]) HSP 1 Score: 58.2 bits (139), Expect = 1.9e-05 Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of MS000171 vs. ExPASy Swiss-Prot
Match: Q680K8 (BTB/POZ domain-containing protein At1g55760 OS=Arabidopsis thaliana OX=3702 GN=At1g55760 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 1.0e-04 Identity = 22/45 (48.89%), Postives = 28/45 (62.22%), Query Frame = 0
BLAST of MS000171 vs. ExPASy TrEMBL
Match: A0A6J1CD49 (BTB/POZ domain-containing protein At1g55760 OS=Momordica charantia OX=3673 GN=LOC111010453 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.0e-07 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MS000171 vs. ExPASy TrEMBL
Match: A0A1U7ZWI7 (BTB/POZ domain-containing protein At1g55760-like OS=Nelumbo nucifera OX=4432 GN=LOC104594323 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.5e-06 Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0
BLAST of MS000171 vs. ExPASy TrEMBL
Match: A0A0B2P2E2 (BTB/POZ domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_022460 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.4e-06 Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of MS000171 vs. ExPASy TrEMBL
Match: A0A0R0IWJ8 (BTB domain-containing protein OS=Glycine max OX=3847 GN=100777871 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.4e-06 Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 0
BLAST of MS000171 vs. ExPASy TrEMBL
Match: I1KYQ7 (BTB domain-containing protein OS=Glycine max OX=3847 GN=100777871 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.4e-06 Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of MS000171 vs. TAIR 10
Match: AT1G55760.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 46.2 bits (108), Expect = 7.1e-06 Identity = 22/45 (48.89%), Postives = 28/45 (62.22%), Query Frame = 0
BLAST of MS000171 vs. TAIR 10
Match: AT1G21780.1 (BTB/POZ domain-containing protein ) HSP 1 Score: 39.3 bits (90), Expect = 8.7e-04 Identity = 17/38 (44.74%), Postives = 24/38 (63.16%), Query Frame = 0
BLAST of MS000171 vs. TAIR 10
Match: AT1G21780.2 (BTB/POZ domain-containing protein ) HSP 1 Score: 39.3 bits (90), Expect = 8.7e-04 Identity = 17/38 (44.74%), Postives = 24/38 (63.16%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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