![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS000170 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCTGCCAGCATGCGCGTCCGCCTGATACAAGTCGTGGGCATAAGCAATTCAGGGGCAGGGGCTTACCTTGAAGCAACTTCCAATGTCATACCTTTTGTCTCCCCTGCTCGCTCTGTTTTCATTCGGAACCCAGCTTCACCACTGTACCTCACTGTGGCCTCA CCTGCCAGCATGCGCGTCCGCCTGATACAAGTCGTGGGCATAAGCAATTCAGGGGCAGGGGCTTACCTTGAAGCAACTTCCAATGTCATACCTTTTGTCTCCCCTGCTCGCTCTGTTTTCATTCGGAACCCAGCTTCACCACTGTACCTCACTGTGGCCTCA CCTGCCAGCATGCGCGTCCGCCTGATACAAGTCGTGGGCATAAGCAATTCAGGGGCAGGGGCTTACCTTGAAGCAACTTCCAATGTCATACCTTTTGTCTCCCCTGCTCGCTCTGTTTTCATTCGGAACCCAGCTTCACCACTGTACCTCACTGTGGCCTCA PASMRVRLIQVVGISNSGAGAYLEATSNVIPFVSPARSVFIRNPASPLYLTVAS Homology
BLAST of MS000170 vs. NCBI nr
Match: WP_206438309.1 (hypothetical protein [Candidatus Frankia datiscae]) HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12 Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 0
BLAST of MS000170 vs. NCBI nr
Match: KAF4392710.1 (hypothetical protein G4B88_029449 [Cannabis sativa]) HSP 1 Score: 77.8 bits (190), Expect = 3.2e-11 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of MS000170 vs. NCBI nr
Match: KAF4349905.1 (hypothetical protein G4B88_002327 [Cannabis sativa]) HSP 1 Score: 77.8 bits (190), Expect = 3.2e-11 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of MS000170 vs. NCBI nr
Match: KAA8541557.1 (hypothetical protein F0562_022709 [Nyssa sinensis]) HSP 1 Score: 74.3 bits (181), Expect = 3.5e-10 Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of MS000170 vs. NCBI nr
Match: THG00223.1 (hypothetical protein TEA_020656 [Camellia sinensis var. sinensis]) HSP 1 Score: 72.0 bits (175), Expect = 1.8e-09 Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of MS000170 vs. ExPASy Swiss-Prot
Match: Q9SSM2 ((R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 3.1e-09 Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of MS000170 vs. ExPASy TrEMBL
Match: A0A7J6DUX9 ((R)-mandelonitrile lyase OS=Cannabis sativa OX=3483 GN=G4B88_002327 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.5e-11 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of MS000170 vs. ExPASy TrEMBL
Match: A0A7J6HEB8 ((R)-mandelonitrile lyase OS=Cannabis sativa OX=3483 GN=G4B88_029449 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.5e-11 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of MS000170 vs. ExPASy TrEMBL
Match: A0A5J5BIC5 (GMC_OxRdtase_N domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_022709 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-10 Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of MS000170 vs. ExPASy TrEMBL
Match: A0A4S4DCA1 (GMC_OxRdtase_N domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_020656 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.5e-10 Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of MS000170 vs. ExPASy TrEMBL
Match: A0A1J7GWN2 (GMC_OxRdtase_N domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_24456 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09 Identity = 37/47 (78.72%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of MS000170 vs. TAIR 10
Match: AT1G73050.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein ) HSP 1 Score: 61.6 bits (148), Expect = 2.2e-10 Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|