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MS000169 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTCAAGGTATTGAGTGTAGTGGCAAGTTTCAAAGAAGAGAAAATTCTCAAGTCATATGTTTTGCAACTCTTGAAGATGAACTTGTTACATCTGGTTTTGACAATAAGGTAATTGCTTTTACAAATCGAGCAACATGTTAGTCTGCCAATTTTCCCTCTTGACTTTTCCATTCTTATCATGTTAGAAGAATTTGTAGAAACAAGGATAGGCATCGGATATTTTTTCTTTTGATTTATTCCTTATTGAATGAAGGCCGATACTTATCAAACTTGGTGGTTTCACCAAAATTAAACATGCTGACTGTATGTGAGCCCTAGACTATTTTTTGCAACTTTTGTGGCACGTGGCACATATTCATAAAAGAAAGTGATTAAATGGTTTATGTAATCAGCTTGTTTAATTACTTGGTTATATTTTCTCTTCTTCAAAGCCTACCGATGTAGGAAGTCAACCAAAGGAGTCGACCCTTTGTGTTATTTCTCCTAAACTTGCTTTGGTTTCAATTGATTCTGGAATTGTCCTATTGTGTGGCTCAACAGTGGTGTCAAACGTTAACCTTGGATTTATAGTGATAGCACTATGCTTGCACCAGATGGAAGTGAGGCTATTATAGGTGGCAAG CTTCAAGGTATTGAGTGTAGTGGCAAGTTTCAAAGAAGAGAAAATTCTCAAGTCATATGTTTTGCAACTCTTGAAGATGAACTTGTTACATCTGGTTTTGACAATAAGCCTACCGATGTAGGAAGTCAACCAAAGGAGTCGACCCTTTGTGTTATTTCTCCTAAACTTGCTTTGGTTTCAATTGATTCTGGAATTGTCCTATTGTGTGGCTCAACAGTGGTGTCAAACGTTAACCTTGGATTTATAGTGATAGCAATGCTTGCACCAGATGGAAGTGAGGCTATTATAGGTGGCAAG CTTCAAGGTATTGAGTGTAGTGGCAAGTTTCAAAGAAGAGAAAATTCTCAAGTCATATGTTTTGCAACTCTTGAAGATGAACTTGTTACATCTGGTTTTGACAATAAGCCTACCGATGTAGGAAGTCAACCAAAGGAGTCGACCCTTTGTGTTATTTCTCCTAAACTTGCTTTGGTTTCAATTGATTCTGGAATTGTCCTATTGTGTGGCTCAACAGTGGTGTCAAACGTTAACCTTGGATTTATAGTGATAGCAATGCTTGCACCAGATGGAAGTGAGGCTATTATAGGTGGCAAG LQGIECSGKFQRRENSQVICFATLEDELVTSGFDNKPTDVGSQPKESTLCVISPKLALVSIDSGIVLLCGSTVVSNVNLGFIVIAMLAPDGSEAIIGGK Homology
BLAST of MS000169 vs. NCBI nr
Match: XP_004137336.2 (actin-interacting protein 1-2 [Cucumis sativus] >KGN63862.1 hypothetical protein Csa_013599 [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 2.0e-27 Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of MS000169 vs. NCBI nr
Match: TYK28480.1 (actin-interacting protein 1-2 [Cucumis melo var. makuwa]) HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27 Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of MS000169 vs. NCBI nr
Match: XP_022987172.1 (actin-interacting protein 1-2 [Cucurbita maxima] >XP_022987173.1 actin-interacting protein 1-2 [Cucurbita maxima] >XP_022987174.1 actin-interacting protein 1-2 [Cucurbita maxima] >XP_022987175.1 actin-interacting protein 1-2 [Cucurbita maxima] >XP_022987176.1 actin-interacting protein 1-2 [Cucurbita maxima]) HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27 Identity = 76/115 (66.09%), Postives = 84/115 (73.04%), Query Frame = 0
BLAST of MS000169 vs. NCBI nr
Match: XP_008453467.1 (PREDICTED: actin-interacting protein 1-2 [Cucumis melo] >KAA0058126.1 actin-interacting protein 1-2 [Cucumis melo var. makuwa]) HSP 1 Score: 132.1 bits (331), Expect = 2.6e-27 Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of MS000169 vs. NCBI nr
Match: KAG6589628.1 (Actin-interacting protein 1-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023316.1 Actin-interacting protein 1-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131.7 bits (330), Expect = 3.4e-27 Identity = 75/115 (65.22%), Postives = 84/115 (73.04%), Query Frame = 0
BLAST of MS000169 vs. ExPASy Swiss-Prot
Match: Q9LV35 (Actin-interacting protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=AIP1-2 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19 Identity = 52/108 (48.15%), Postives = 71/108 (65.74%), Query Frame = 0
BLAST of MS000169 vs. ExPASy Swiss-Prot
Match: Q9ZU34 (Actin-interacting protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=AIP1-1 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10 Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of MS000169 vs. ExPASy TrEMBL
Match: A0A0A0LST9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G024940 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 9.7e-28 Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of MS000169 vs. ExPASy TrEMBL
Match: A0A6J1JDE3 (actin-interacting protein 1-2 OS=Cucurbita maxima OX=3661 GN=LOC111484803 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27 Identity = 76/115 (66.09%), Postives = 84/115 (73.04%), Query Frame = 0
BLAST of MS000169 vs. ExPASy TrEMBL
Match: A0A5A7UVD1 (Actin-interacting protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004360 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27 Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of MS000169 vs. ExPASy TrEMBL
Match: A0A5D3DZ17 (Actin-interacting protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001140 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27 Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of MS000169 vs. ExPASy TrEMBL
Match: A0A1S3BWE0 (actin-interacting protein 1-2 OS=Cucumis melo OX=3656 GN=LOC103494170 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.3e-27 Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of MS000169 vs. TAIR 10
Match: AT3G18060.1 (transducin family protein / WD-40 repeat family protein ) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-20 Identity = 52/108 (48.15%), Postives = 71/108 (65.74%), Query Frame = 0
BLAST of MS000169 vs. TAIR 10
Match: AT2G01330.1 (nucleotide binding ) HSP 1 Score: 67.0 bits (162), Expect = 9.6e-12 Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of MS000169 vs. TAIR 10
Match: AT2G01330.2 (nucleotide binding ) HSP 1 Score: 67.0 bits (162), Expect = 9.6e-12 Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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