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MS000166 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCTAATACACAAAGAGGTTGCGGATTGAATAAATATTTTTGGACAGTAGAGGAAGATGCAGTGTTGGTGGGCGCACTTCAAGAACTAAGTCATAGTAGTTTATGGCGAGCAGAAAATGGACTCAAGAATGAGTATTTGAATCAAATTGAACAATTCATGTTGGAAAAATTACCTTCGTCTACCTTAAAGCCATCTCCCACACATTGAATCTCGAGTGAGAACGCTAAAGTCCAAATACAATGCACTAGCCGAGTTGCTTAGAGATAAAAGTGAATTTAGTTGGAAT ATGACTTCTAATACACAAAGAGGTTGCGGATTGAATAAATATTTTTGGACAGTAGAGGAAGATGCAGTGTTGGTGGGCGCACTTCAAGAACTAAGTCATAGTAGTTTATGGCGAGCAGAAAATGGACTCAAGAATGAGTATTTGAATCAAATTGAACAATTCATGTTGGAAAAATTACCTTCGTCTACCTTAAAGCCACCACACATTGAATCTCGAGTGAGAACGCTAAAGTCCAAATACAATGCACTAGCCGAGTTGCTTAGAGATAAAAGTGAATTTAGTTGGAAT ATGACTTCTAATACACAAAGAGGTTGCGGATTGAATAAATATTTTTGGACAGTAGAGGAAGATGCAGTGTTGGTGGGCGCACTTCAAGAACTAAGTCATAGTAGTTTATGGCGAGCAGAAAATGGACTCAAGAATGAGTATTTGAATCAAATTGAACAATTCATGTTGGAAAAATTACCTTCGTCTACCTTAAAGCCACCACACATTGAATCTCGAGTGAGAACGCTAAAGTCCAAATACAATGCACTAGCCGAGTTGCTTAGAGATAAAAGTGAATTTAGTTGGAAT MTSNTQRGCGLNKYFWTVEEDAVLVGALQELSHSSLWRAENGLKNEYLNQIEQFMLEKLPSSTLKPPHIESRVRTLKSKYNALAELLRDKSEFSWN Homology
BLAST of MS000166 vs. NCBI nr
Match: XP_040367957.1 (uncharacterized protein LOC112175778 isoform X1 [Rosa chinensis]) HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of MS000166 vs. NCBI nr
Match: XP_040367958.1 (uncharacterized protein LOC112175778 isoform X2 [Rosa chinensis] >PRQ17823.1 putative Myb/SANT-like domain-containing protein [Rosa chinensis]) HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of MS000166 vs. NCBI nr
Match: PON33240.1 (Myb/SANT-like domain containing protein [Parasponia andersonii]) HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19 Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of MS000166 vs. NCBI nr
Match: XP_039141103.1 (uncharacterized protein LOC120278225 [Dioscorea cayenensis subsp. rotundata]) HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19 Identity = 55/98 (56.12%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of MS000166 vs. NCBI nr
Match: PON79138.1 (Myb/SANT-like domain containing protein [Trema orientale]) HSP 1 Score: 105.1 bits (261), Expect = 3.3e-19 Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of MS000166 vs. ExPASy TrEMBL
Match: A0A2P6P7B4 (Putative Myb/SANT-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0199171 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 8.5e-21 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of MS000166 vs. ExPASy TrEMBL
Match: A0A2P5A9M4 (Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_354480 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 9.4e-20 Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of MS000166 vs. ExPASy TrEMBL
Match: A0A2P5E0U1 (Myb/SANT-like domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_236500 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19 Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of MS000166 vs. ExPASy TrEMBL
Match: A0A7J6F6Q2 (Myb_DNA-bind_3 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_018830 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.3e-18 Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0
BLAST of MS000166 vs. ExPASy TrEMBL
Match: A0A7J6I8B4 (Myb_DNA-bind_3 domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_002419 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.3e-18 Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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