Homology
BLAST of MS000164 vs. NCBI nr
Match:
XP_022152476.1 (DEAD-box ATP-dependent RNA helicase FANCM [Momordica charantia])
HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75
Identity = 154/194 (79.38%), Postives = 164/194 (84.54%), Query Frame = 0
Query: 1 ILLNSELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQI 60
ILL+SELGSCSVRTA+DL V T+ VN+PTTSQ ILSSPETDGVNVLEDKAMNQI
Sbjct: 866 ILLSSELGSCSVRTAQDLTVQTEAVNKPTTSQTKFLQDEILSSPETDGVNVLEDKAMNQI 925
Query: 61 EKIHQTAISNRTLLIKETVPVKCP-LFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFVP 120
E IHQTAISNRTL K + P + IEPQFPLADECS I+TQLSPRLTNLVKSGFVP
Sbjct: 926 ETIHQTAISNRTLFNKGDSASEMPVVLEIEPQFPLADECSIIETQLSPRLTNLVKSGFVP 985
Query: 121 DSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLFL 180
DS IDDCGNSSRQRIYEF IP+FILPVQVDGE LLKSPS GTSERINCNGGSC GDD+FL
Sbjct: 986 DSPIDDCGNSSRQRIYEFTIPEFILPVQVDGEQLLKSPSLGTSERINCNGGSCAGDDVFL 1045
Query: 181 STGEVRPSLLKGKD 187
STGEV+PSLLK D
Sbjct: 1046 STGEVQPSLLKEND 1059
BLAST of MS000164 vs. NCBI nr
Match:
XP_022939320.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Cucurbita moschata])
HSP 1 Score: 225.3 bits (573), Expect = 4.3e-55
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 ILLNS-ELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQ 60
ILL+S ELGS VRTA+DLIV T+ V+EPTTSQ +L SPETD VLEDKA+NQ
Sbjct: 851 ILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDATVLEDKAVNQ 910
Query: 61 IEKIHQTAISNRTLLIK-ETVPVKCPLFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFV 120
IEKIHQ+ + RT + + K + IEPQFP ADECS I+TQLSPRLTNL++SGFV
Sbjct: 911 IEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRLTNLIESGFV 970
Query: 121 PDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLF 180
PDS ID+CG SRQRIYE AI QFILPVQVDGE LLKS SPG ++RINCN GS G+D+F
Sbjct: 971 PDSPIDECG-YSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEGSHAGNDVF 1030
Query: 181 LSTGEVRPSLLKGKD 187
L++GE RPS+L+ D
Sbjct: 1031 LASGEDRPSVLEDND 1044
BLAST of MS000164 vs. NCBI nr
Match:
XP_022939322.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Cucurbita moschata])
HSP 1 Score: 225.3 bits (573), Expect = 4.3e-55
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 ILLNS-ELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQ 60
ILL+S ELGS VRTA+DLIV T+ V+EPTTSQ +L SPETD VLEDKA+NQ
Sbjct: 771 ILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDATVLEDKAVNQ 830
Query: 61 IEKIHQTAISNRTLLIK-ETVPVKCPLFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFV 120
IEKIHQ+ + RT + + K + IEPQFP ADECS I+TQLSPRLTNL++SGFV
Sbjct: 831 IEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRLTNLIESGFV 890
Query: 121 PDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLF 180
PDS ID+CG SRQRIYE AI QFILPVQVDGE LLKS SPG ++RINCN GS G+D+F
Sbjct: 891 PDSPIDECG-YSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEGSHAGNDVF 950
Query: 181 LSTGEVRPSLLKGKD 187
L++GE RPS+L+ D
Sbjct: 951 LASGEDRPSVLEDND 964
BLAST of MS000164 vs. NCBI nr
Match:
XP_022939326.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X8 [Cucurbita moschata])
HSP 1 Score: 225.3 bits (573), Expect = 4.3e-55
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 ILLNS-ELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQ 60
ILL+S ELGS VRTA+DLIV T+ V+EPTTSQ +L SPETD VLEDKA+NQ
Sbjct: 566 ILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDATVLEDKAVNQ 625
Query: 61 IEKIHQTAISNRTLLIK-ETVPVKCPLFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFV 120
IEKIHQ+ + RT + + K + IEPQFP ADECS I+TQLSPRLTNL++SGFV
Sbjct: 626 IEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRLTNLIESGFV 685
Query: 121 PDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLF 180
PDS ID+CG SRQRIYE AI QFILPVQVDGE LLKS SPG ++RINCN GS G+D+F
Sbjct: 686 PDSPIDECG-YSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEGSHAGNDVF 745
Query: 181 LSTGEVRPSLLKGKD 187
L++GE RPS+L+ D
Sbjct: 746 LASGEDRPSVLEDND 759
BLAST of MS000164 vs. NCBI nr
Match:
XP_022939323.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X5 [Cucurbita moschata])
HSP 1 Score: 225.3 bits (573), Expect = 4.3e-55
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 ILLNS-ELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQ 60
ILL+S ELGS VRTA+DLIV T+ V+EPTTSQ +L SPETD VLEDKA+NQ
Sbjct: 739 ILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDATVLEDKAVNQ 798
Query: 61 IEKIHQTAISNRTLLIK-ETVPVKCPLFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFV 120
IEKIHQ+ + RT + + K + IEPQFP ADECS I+TQLSPRLTNL++SGFV
Sbjct: 799 IEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRLTNLIESGFV 858
Query: 121 PDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLF 180
PDS ID+CG SRQRIYE AI QFILPVQVDGE LLKS SPG ++RINCN GS G+D+F
Sbjct: 859 PDSPIDECG-YSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEGSHAGNDVF 918
Query: 181 LSTGEVRPSLLKGKD 187
L++GE RPS+L+ D
Sbjct: 919 LASGEDRPSVLEDND 932
BLAST of MS000164 vs. ExPASy Swiss-Prot
Match:
I3XHK1 (DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FANCM PE=2 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 7.7e-07
Identity = 32/98 (32.65%), Postives = 48/98 (48.98%), Query Frame = 0
Query: 89 DECSKIKTQLSPRLTNLVKSGFVPDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLK 148
D+C + +LSPRLTN +KSG VP+S + D G ++R+ EF PQ P++ E +
Sbjct: 914 DDCEGL--ELSPRLTNFIKSGIVPESPVYDQGEANREEDLEF--PQLSSPMRFSNELAGE 973
Query: 149 SPSPGTSERINCNGGSCTGDDLFLSTGEVRPSLLKGKD 187
S P + CN + L T + L G +
Sbjct: 974 SSFPERKVQHKCNDYNIVSTTTELRTPQKEVGLANGTE 1007
BLAST of MS000164 vs. ExPASy TrEMBL
Match:
A0A6J1DHU7 (DEAD-box ATP-dependent RNA helicase FANCM OS=Momordica charantia OX=3673 GN=LOC111020197 PE=3 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 8.1e-76
Identity = 154/194 (79.38%), Postives = 164/194 (84.54%), Query Frame = 0
Query: 1 ILLNSELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQI 60
ILL+SELGSCSVRTA+DL V T+ VN+PTTSQ ILSSPETDGVNVLEDKAMNQI
Sbjct: 866 ILLSSELGSCSVRTAQDLTVQTEAVNKPTTSQTKFLQDEILSSPETDGVNVLEDKAMNQI 925
Query: 61 EKIHQTAISNRTLLIKETVPVKCP-LFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFVP 120
E IHQTAISNRTL K + P + IEPQFPLADECS I+TQLSPRLTNLVKSGFVP
Sbjct: 926 ETIHQTAISNRTLFNKGDSASEMPVVLEIEPQFPLADECSIIETQLSPRLTNLVKSGFVP 985
Query: 121 DSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLFL 180
DS IDDCGNSSRQRIYEF IP+FILPVQVDGE LLKSPS GTSERINCNGGSC GDD+FL
Sbjct: 986 DSPIDDCGNSSRQRIYEFTIPEFILPVQVDGEQLLKSPSLGTSERINCNGGSCAGDDVFL 1045
Query: 181 STGEVRPSLLKGKD 187
STGEV+PSLLK D
Sbjct: 1046 STGEVQPSLLKEND 1059
BLAST of MS000164 vs. ExPASy TrEMBL
Match:
A0A6J1FGG7 (DEAD-box ATP-dependent RNA helicase FANCM isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 2.1e-55
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 ILLNS-ELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQ 60
ILL+S ELGS VRTA+DLIV T+ V+EPTTSQ +L SPETD VLEDKA+NQ
Sbjct: 771 ILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDATVLEDKAVNQ 830
Query: 61 IEKIHQTAISNRTLLIK-ETVPVKCPLFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFV 120
IEKIHQ+ + RT + + K + IEPQFP ADECS I+TQLSPRLTNL++SGFV
Sbjct: 831 IEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRLTNLIESGFV 890
Query: 121 PDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLF 180
PDS ID+CG SRQRIYE AI QFILPVQVDGE LLKS SPG ++RINCN GS G+D+F
Sbjct: 891 PDSPIDECG-YSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEGSHAGNDVF 950
Query: 181 LSTGEVRPSLLKGKD 187
L++GE RPS+L+ D
Sbjct: 951 LASGEDRPSVLEDND 964
BLAST of MS000164 vs. ExPASy TrEMBL
Match:
A0A6J1FLC0 (DEAD-box ATP-dependent RNA helicase FANCM isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 2.1e-55
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 ILLNS-ELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQ 60
ILL+S ELGS VRTA+DLIV T+ V+EPTTSQ +L SPETD VLEDKA+NQ
Sbjct: 739 ILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDATVLEDKAVNQ 798
Query: 61 IEKIHQTAISNRTLLIK-ETVPVKCPLFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFV 120
IEKIHQ+ + RT + + K + IEPQFP ADECS I+TQLSPRLTNL++SGFV
Sbjct: 799 IEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRLTNLIESGFV 858
Query: 121 PDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLF 180
PDS ID+CG SRQRIYE AI QFILPVQVDGE LLKS SPG ++RINCN GS G+D+F
Sbjct: 859 PDSPIDECG-YSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEGSHAGNDVF 918
Query: 181 LSTGEVRPSLLKGKD 187
L++GE RPS+L+ D
Sbjct: 919 LASGEDRPSVLEDND 932
BLAST of MS000164 vs. ExPASy TrEMBL
Match:
A0A6J1FFJ7 (DEAD-box ATP-dependent RNA helicase FANCM isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 2.1e-55
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 ILLNS-ELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQ 60
ILL+S ELGS VRTA+DLIV T+ V+EPTTSQ +L SPETD VLEDKA+NQ
Sbjct: 803 ILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDATVLEDKAVNQ 862
Query: 61 IEKIHQTAISNRTLLIK-ETVPVKCPLFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFV 120
IEKIHQ+ + RT + + K + IEPQFP ADECS I+TQLSPRLTNL++SGFV
Sbjct: 863 IEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRLTNLIESGFV 922
Query: 121 PDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLF 180
PDS ID+CG SRQRIYE AI QFILPVQVDGE LLKS SPG ++RINCN GS G+D+F
Sbjct: 923 PDSPIDECG-YSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEGSHAGNDVF 982
Query: 181 LSTGEVRPSLLKGKD 187
L++GE RPS+L+ D
Sbjct: 983 LASGEDRPSVLEDND 996
BLAST of MS000164 vs. ExPASy TrEMBL
Match:
A0A6J1FGU4 (DEAD-box ATP-dependent RNA helicase FANCM isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111445272 PE=3 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 2.1e-55
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = 0
Query: 1 ILLNS-ELGSCSVRTARDLIVPTKVVNEPTTSQ-------ILSSPETDGVNVLEDKAMNQ 60
ILL+S ELGS VRTA+DLIV T+ V+EPTTSQ +L SPETD VLEDKA+NQ
Sbjct: 645 ILLSSPELGSWRVRTAQDLIVRTEAVDEPTTSQTKFLQNEVLPSPETDDATVLEDKAVNQ 704
Query: 61 IEKIHQTAISNRTLLIK-ETVPVKCPLFYIEPQFPLADECSKIKTQLSPRLTNLVKSGFV 120
IEKIHQ+ + RT + + K + IEPQFP ADECS I+TQLSPRLTNL++SGFV
Sbjct: 705 IEKIHQSTVLKRTFFNEGDNTDEKPVVLEIEPQFPPADECSIIETQLSPRLTNLIESGFV 764
Query: 121 PDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLKSPSPGTSERINCNGGSCTGDDLF 180
PDS ID+CG SRQRIYE AI QFILPVQVDGE LLKS SPG ++RINCN GS G+D+F
Sbjct: 765 PDSPIDECG-YSRQRIYESAISQFILPVQVDGEQLLKSSSPGINKRINCNEGSHAGNDVF 824
Query: 181 LSTGEVRPSLLKGKD 187
L++GE RPS+L+ D
Sbjct: 825 LASGEDRPSVLEDND 838
BLAST of MS000164 vs. TAIR 10
Match:
AT1G35530.1 (DEAD/DEAH box RNA helicase family protein )
HSP 1 Score: 55.5 bits (132), Expect = 5.5e-08
Identity = 32/98 (32.65%), Postives = 48/98 (48.98%), Query Frame = 0
Query: 89 DECSKIKTQLSPRLTNLVKSGFVPDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLK 148
D+C + +LSPRLTN +KSG VP+S + D G ++R+ EF PQ P++ E +
Sbjct: 868 DDCEGL--ELSPRLTNFIKSGIVPESPVYDQGEANREEDLEF--PQLSSPMRFSNELAGE 927
Query: 149 SPSPGTSERINCNGGSCTGDDLFLSTGEVRPSLLKGKD 187
S P + CN + L T + L G +
Sbjct: 928 SSFPERKVQHKCNDYNIVSTTTELRTPQKEVGLANGTE 961
BLAST of MS000164 vs. TAIR 10
Match:
AT1G35530.2 (DEAD/DEAH box RNA helicase family protein )
HSP 1 Score: 55.5 bits (132), Expect = 5.5e-08
Identity = 32/98 (32.65%), Postives = 48/98 (48.98%), Query Frame = 0
Query: 89 DECSKIKTQLSPRLTNLVKSGFVPDSTIDDCGNSSRQRIYEFAIPQFILPVQVDGENLLK 148
D+C + +LSPRLTN +KSG VP+S + D G ++R+ EF PQ P++ E +
Sbjct: 913 DDCEGL--ELSPRLTNFIKSGIVPESPVYDQGEANREEDLEF--PQLSSPMRFSNELAGE 972
Query: 149 SPSPGTSERINCNGGSCTGDDLFLSTGEVRPSLLKGKD 187
S P + CN + L T + L G +
Sbjct: 973 SSFPERKVQHKCNDYNIVSTTTELRTPQKEVGLANGTE 1006
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022152476.1 | 1.7e-75 | 79.38 | DEAD-box ATP-dependent RNA helicase FANCM [Momordica charantia] | [more] |
XP_022939320.1 | 4.3e-55 | 64.10 | DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Cucurbita moschata] | [more] |
XP_022939322.1 | 4.3e-55 | 64.10 | DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Cucurbita moschata] | [more] |
XP_022939326.1 | 4.3e-55 | 64.10 | DEAD-box ATP-dependent RNA helicase FANCM isoform X8 [Cucurbita moschata] | [more] |
XP_022939323.1 | 4.3e-55 | 64.10 | DEAD-box ATP-dependent RNA helicase FANCM isoform X5 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
I3XHK1 | 7.7e-07 | 32.65 | DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FAN... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DHU7 | 8.1e-76 | 79.38 | DEAD-box ATP-dependent RNA helicase FANCM OS=Momordica charantia OX=3673 GN=LOC1... | [more] |
A0A6J1FGG7 | 2.1e-55 | 64.10 | DEAD-box ATP-dependent RNA helicase FANCM isoform X4 OS=Cucurbita moschata OX=36... | [more] |
A0A6J1FLC0 | 2.1e-55 | 64.10 | DEAD-box ATP-dependent RNA helicase FANCM isoform X5 OS=Cucurbita moschata OX=36... | [more] |
A0A6J1FFJ7 | 2.1e-55 | 64.10 | DEAD-box ATP-dependent RNA helicase FANCM isoform X3 OS=Cucurbita moschata OX=36... | [more] |
A0A6J1FGU4 | 2.1e-55 | 64.10 | DEAD-box ATP-dependent RNA helicase FANCM isoform X6 OS=Cucurbita moschata OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT1G35530.1 | 5.5e-08 | 32.65 | DEAD/DEAH box RNA helicase family protein | [more] |
AT1G35530.2 | 5.5e-08 | 32.65 | DEAD/DEAH box RNA helicase family protein | [more] |