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MS000154 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TACCAGGAGGCGGGCAGAAGAGCGTTCTGGTCTATCAATGGACCAAAAATACTGCAAGTGGGTTATGAAGATGAGGAAGATGCAAAAGTAATGGAAGCATTTGAGAGAGTTGGCTCCCTAGTAAGTAAC TACCAGGAGGCGGGCAGAAGAGCGTTCTGGTCTATCAATGGACCAAAAATACTGCAAGTGGGTTATGAAGATGAGGAAGATGCAAAAGTAATGGAAGCATTTGAGAGAGTTGGCTCCCTAGTAAGTAAC TACCAGGAGGCGGGCAGAAGAGCGTTCTGGTCTATCAATGGACCAAAAATACTGCAAGTGGGTTATGAAGATGAGGAAGATGCAAAAGTAATGGAAGCATTTGAGAGAGTTGGCTCCCTAGTAAGTAAC YQEAGRRAFWSINGPKILQVGYEDEEDAKVMEAFERVGSLVSN Homology
BLAST of MS000154 vs. NCBI nr
Match: XP_022156298.1 (protein HGH1 homolog [Momordica charantia]) HSP 1 Score: 84.3 bits (207), Expect = 2.7e-13 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
BLAST of MS000154 vs. NCBI nr
Match: XP_022157089.1 (protein HGH1 homolog isoform X1 [Momordica charantia] >XP_022157090.1 protein HGH1 homolog isoform X1 [Momordica charantia]) HSP 1 Score: 82.4 bits (202), Expect = 1.0e-12 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of MS000154 vs. NCBI nr
Match: XP_022157092.1 (protein HGH1 homolog isoform X3 [Momordica charantia]) HSP 1 Score: 82.4 bits (202), Expect = 1.0e-12 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of MS000154 vs. NCBI nr
Match: XP_022157091.1 (protein HGH1 homolog isoform X2 [Momordica charantia]) HSP 1 Score: 82.4 bits (202), Expect = 1.0e-12 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of MS000154 vs. NCBI nr
Match: TXG56489.1 (hypothetical protein EZV62_017802 [Acer yangbiense]) HSP 1 Score: 80.9 bits (198), Expect = 3.0e-12 Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of MS000154 vs. ExPASy TrEMBL
Match: A0A6J1DQ90 (Protein HGH1 homolog OS=Momordica charantia OX=3673 GN=LOC111023223 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.3e-13 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
BLAST of MS000154 vs. ExPASy TrEMBL
Match: A0A6J1DVH9 (Protein HGH1 homolog OS=Momordica charantia OX=3673 GN=LOC111023899 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.0e-13 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of MS000154 vs. ExPASy TrEMBL
Match: A0A6J1DTM8 (Protein HGH1 homolog OS=Momordica charantia OX=3673 GN=LOC111023899 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.0e-13 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of MS000154 vs. ExPASy TrEMBL
Match: A0A6J1DWY1 (Protein HGH1 homolog OS=Momordica charantia OX=3673 GN=LOC111023899 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.0e-13 Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of MS000154 vs. ExPASy TrEMBL
Match: A0A5C7HI20 (Protein HGH1 homolog OS=Acer yangbiense OX=1000413 GN=EZV62_017802 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.5e-12 Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = 0
BLAST of MS000154 vs. TAIR 10
Match: AT1G14300.2 (ARM repeat superfamily protein ) HSP 1 Score: 70.1 bits (170), Expect = 4.9e-13 Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0
BLAST of MS000154 vs. TAIR 10
Match: AT1G14300.1 (ARM repeat superfamily protein ) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-12 Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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