MS000049 (gene) Bitter gourd (TR) v1

Overview
NameMS000049
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein PLANT CADMIUM RESISTANCE 10
Locationscaffold946_1: 452202 .. 454000 (+)
RNA-Seq ExpressionMS000049
SyntenyMS000049
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGCCGAAGTAGTTACGTCCCTCCTGCATATGTTCCAATAGGACAGTCTGATTCAGAAGCGGGAATTATATCCAGCAATGAGGGCCATGCTGCACCTATTGAATCTAAGGATGGATTGACACAATGGTCATCTGGAATCTGTGCATGCTTCGATGATACGCAGAGCTGTACGCTACTTTCTGCCTTCTGAGCTTGATTTATGCCAAGGAAATTATGAAGGTGCATCTTGAGTGTGGAAAGAAAATGCCTCATTACTTTGCATGTGTTCTTATAGCAAAATGTTGAATAATTCCATTCAACGTAGGCTAGTAGGGAATCTTTCATACCCTGTTGTGAAATATAAGCTTGCTCTATCATTTACTTTTTTGAGTTTTTTAAGAACTTTGTTAGAAACTATGTTGTTGTGAACCAACTTCTTTGAAGCCAAAGCACTGGATTTTGCACTATGATTAGGTTTACTAAAGGAAATCTGATCAGCCCAACATGTTGGGAGCTTAAAGAACTTTGAATTCAGTTAAAAAGGGGTTAAGAAATCCTTAATATCTACCTTCTTTGGGGGTTACATATTCCTTTAGTTGTATAGCTATTACATGTTTTATGATTAATTAGAGTTCCTTTAATAATTGAGAAGTGCGCATAAAGATTCACTGATTGTATTTAAAATAAATCAGGACACTTGACCAAATTTTATTGAGTTGGTTGAAAGGAACTTTATTATTATTGAAAATAATGTGATTTGAGTTGAAGAGTATTGCATTTCTATTGGTCCATCTCTAGCATGTTAAATGGGGAGCTCACTGCAAAATTTTCTGGGTGCAGGTTTTATTGGCCTTTTTTGTCCATGCTTTCTGTTTGGAAAGAATGCAGAGGTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATGCAGTCTGCTGCTTATTGACTGATGGAGTTTTGTGGAATGTACCTGGATGCTTTGTTGCATGTTATGCTTGTGGCTACCGCAAGGAACTCCGGTCGAAGTACAATTTGCCAGTATAATATCTTACTCAGTACTTTTTCATGGCTTATTATCATTATGTTTCTACTATCTATCTGTTCATGGTTTTGCATGCATAAGTTATTTACACTTATATATATGATGTGCAGCATTTAGGTTGATGTTATGTATTGATTCATTCTCCAGAATCTAGAAATTGACATCTTGTCGTGTCATATCTGTGTTCACGTCCCTTGTCTAGTGTCTATATTCGTGCTTCTTAGCTGCTGATATATGCCTTCAACCTTGCCTAAGAGAAGTCAAAATATTAAGCAGCCTTTTTCTTTAGGTTTATCTCTGCTCAAGGCAGAGAATTGGCTCTCGTGCCATTATCCCTGCCATATAATGTAGGCCAGATCGCTACGTGCCCATTTGATAACATTCATGTTTCTTCATTTTTAATAAGACTAGCAACCTGACAGTCCTAAGCAACCTGGATGGCTTCAACATCCAAGAATTCAGTATGATAAAACAATATTTTTATTTATGTTTTAGAACAAATTAGTCGTTGAGTTAACTTAGCGATTACTATGTTCCCATGAACCACACCTTTTAACTTACTGAAACGTGATGCAGGAAGCACCTTGTGGAGACTTCGTTACTCACTTCTTCTGCCATTTATGTGCTATCTGTCAAGAATATAGGGAGATCCGTGAAAGAGCTGGTGGATCTGGTTCCCATGATTTGAATCTGGCTGTTGTTACCCCGCCAACAACTCAGACGATGGAACCTAACCAGGAAAAA

mRNA sequence

ATGGTTGGCCGAAGTAGTTACGTCCCTCCTGCATATGTTCCAATAGGACAGTCTGATTCAGAAGCGGGAATTATATCCAGCAATGAGGGCCATGCTGCACCTATTGAATCTAAGGATGGATTGACACAATGGTCATCTGGAATCTGTGCATGCTTCGATGATACGCAGAGCTGTTTTATTGGCCTTTTTTGTCCATGCTTTCTGTTTGGAAAGAATGCAGAGGTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATGCAGTCTGCTGCTTATTGACTGATGGAGTTTTGTGGAATGTACCTGGATGCTTTGTTGCATGTTATGCTTGTGGCTACCGCAAGGAACTCCGGTCGAAGTACAATTTGCCAGAAGCACCTTGTGGAGACTTCGTTACTCACTTCTTCTGCCATTTATGTGCTATCTGTCAAGAATATAGGGAGATCCGTGAAAGAGCTGGTGGATCTGGTTCCCATGATTTGAATCTGGCTGTTGTTACCCCGCCAACAACTCAGACGATGGAACCTAACCAGGAAAAA

Coding sequence (CDS)

ATGGTTGGCCGAAGTAGTTACGTCCCTCCTGCATATGTTCCAATAGGACAGTCTGATTCAGAAGCGGGAATTATATCCAGCAATGAGGGCCATGCTGCACCTATTGAATCTAAGGATGGATTGACACAATGGTCATCTGGAATCTGTGCATGCTTCGATGATACGCAGAGCTGTTTTATTGGCCTTTTTTGTCCATGCTTTCTGTTTGGAAAGAATGCAGAGGTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATGCAGTCTGCTGCTTATTGACTGATGGAGTTTTGTGGAATGTACCTGGATGCTTTGTTGCATGTTATGCTTGTGGCTACCGCAAGGAACTCCGGTCGAAGTACAATTTGCCAGAAGCACCTTGTGGAGACTTCGTTACTCACTTCTTCTGCCATTTATGTGCTATCTGTCAAGAATATAGGGAGATCCGTGAAAGAGCTGGTGGATCTGGTTCCCATGATTTGAATCTGGCTGTTGTTACCCCGCCAACAACTCAGACGATGGAACCTAACCAGGAAAAA

Protein sequence

MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFIGLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYACGYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTTQTMEPNQEK
Homology
BLAST of MS000049 vs. NCBI nr
Match: XP_022152000.1 (protein PLANT CADMIUM RESISTANCE 10 isoform X1 [Momordica charantia] >XP_022152001.1 protein PLANT CADMIUM RESISTANCE 10 isoform X1 [Momordica charantia])

HSP 1 Score: 409.8 bits (1052), Expect = 1.2e-110
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60
           MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI
Sbjct: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60

Query: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120
           GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC
Sbjct: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120

Query: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180
           GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT
Sbjct: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180

Query: 181 QTMEPNQEK 190
           QTMEPNQEK
Sbjct: 181 QTMEPNQEK 189

BLAST of MS000049 vs. NCBI nr
Match: XP_038903486.1 (protein PLANT CADMIUM RESISTANCE 10 [Benincasa hispida])

HSP 1 Score: 349.0 bits (894), Expect = 2.6e-92
Identity = 162/189 (85.71%), Postives = 168/189 (88.89%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60
           M GR SYVPPAYVP+GQSDSEA IIS +E    P E KDGL+QWSSGICAC DD QSCFI
Sbjct: 1   MDGRRSYVPPAYVPLGQSDSEAEIISRDESQPTPDELKDGLSQWSSGICACCDDMQSCFI 60

Query: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120
           GLFCPCFLFGKNAE+LGSRTMFGSCATHFILWAL N VCCLLTDGVLWNVPGCF+ACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALMNTVCCLLTDGVLWNVPGCFLACYAC 120

Query: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRER-AGGSGSHDLNLAVVTPPT 180
           GYRK LRSKYNLPEAPCGDFVTHFFCH CAICQEYREIRER AGGSGSH+L LAVVTPP 
Sbjct: 121 GYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERSAGGSGSHELTLAVVTPPV 180

Query: 181 TQTMEPNQE 189
           TQTME N E
Sbjct: 181 TQTMESNPE 189

BLAST of MS000049 vs. NCBI nr
Match: XP_008443175.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Cucumis melo])

HSP 1 Score: 346.3 bits (887), Expect = 1.7e-91
Identity = 157/188 (83.51%), Postives = 168/188 (89.36%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60
           M G  SYVPPAYVPI QSDSE  IIS +E +  P + KDGL+QWSSGICAC DD QSCFI
Sbjct: 1   MDGPRSYVPPAYVPISQSDSETEIISRDESNPTPNQLKDGLSQWSSGICACCDDMQSCFI 60

Query: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120
           GLFCPCFLFGKNAE+LGS+T+FGSCATHFILWALTN VCCLL+DG+LWNVPGCF+ACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSQTIFGSCATHFILWALTNTVCCLLSDGLLWNVPGCFLACYAC 120

Query: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180
           GYRK LRSKYNLPEAPCGDFVTHFFCH CAICQEYREIRERAGGSGSH+LNL VVTPPTT
Sbjct: 121 GYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGSGSHELNLTVVTPPTT 180

Query: 181 QTMEPNQE 189
           QTME N E
Sbjct: 181 QTMESNPE 188

BLAST of MS000049 vs. NCBI nr
Match: KAE8651159.1 (hypothetical protein Csa_002610 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 2.2e-91
Identity = 158/188 (84.04%), Postives = 166/188 (88.30%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60
           M G  SYVPPAYVPI QSD EA I S +E +  P E KDGL+QWSSGICAC DD QSCFI
Sbjct: 99  MDGPRSYVPPAYVPISQSDLEAEISSRDESNPTPNELKDGLSQWSSGICACCDDMQSCFI 158

Query: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120
           GLFCPCFLFGKNAE+LGSRTMFGSCATHFILWALTN VCCLL+DG+LWNVPGCF+ACYAC
Sbjct: 159 GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLSDGILWNVPGCFLACYAC 218

Query: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180
           GYRK LRSKYNLPEAPCGDFVTHFFCH CAICQEYREIRERAGG GSH+LNL VVTPPTT
Sbjct: 219 GYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGYGSHELNLTVVTPPTT 278

Query: 181 QTMEPNQE 189
           QTME N E
Sbjct: 279 QTMESNPE 286

BLAST of MS000049 vs. NCBI nr
Match: XP_004136605.1 (protein PLANT CADMIUM RESISTANCE 10 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 2.2e-91
Identity = 158/188 (84.04%), Postives = 166/188 (88.30%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60
           M G  SYVPPAYVPI QSD EA I S +E +  P E KDGL+QWSSGICAC DD QSCFI
Sbjct: 1   MDGPRSYVPPAYVPISQSDLEAEISSRDESNPTPNELKDGLSQWSSGICACCDDMQSCFI 60

Query: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120
           GLFCPCFLFGKNAE+LGSRTMFGSCATHFILWALTN VCCLL+DG+LWNVPGCF+ACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLSDGILWNVPGCFLACYAC 120

Query: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180
           GYRK LRSKYNLPEAPCGDFVTHFFCH CAICQEYREIRERAGG GSH+LNL VVTPPTT
Sbjct: 121 GYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGYGSHELNLTVVTPPTT 180

Query: 181 QTMEPNQE 189
           QTME N E
Sbjct: 181 QTMESNPE 188

BLAST of MS000049 vs. ExPASy Swiss-Prot
Match: Q8S8T8 (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.0e-67
Identity = 113/183 (61.75%), Postives = 136/183 (74.32%), Query Frame = 0

Query: 4   RSSYVPPAYVPIGQSDSEAGI--ISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFIG 63
           +  YVPP+Y+P+ QSD++  +   + N   A    +KD   QWSSGICACFDD QSC +G
Sbjct: 5   KGHYVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVG 64

Query: 64  LFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYACG 123
           LFCPC++FGKNAE+LGS T  G C TH I WAL N +CC  T+G L  +PGCFV+CYACG
Sbjct: 65  LFCPCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACG 124

Query: 124 YRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTTQ 183
           YRK LR+KYNL EAPCGDFVTHFFCHLCAICQEYREIRE++ GS   D+ +A+   P  Q
Sbjct: 125 YRKSLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQ 184

Query: 184 TME 185
           TME
Sbjct: 185 TME 187

BLAST of MS000049 vs. ExPASy Swiss-Prot
Match: B4FF80 (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-62
Identity = 112/185 (60.54%), Postives = 129/185 (69.73%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISS-NEGHAAPIESKDGLTQWSSGICACFDDTQSCF 60
           M G+ SYVPP Y+P+   D+E   + +  E HA   +     TQWSSGICACFDD QSC 
Sbjct: 1   MAGKGSYVPPQYIPLYSLDTEEDRVPAVEENHATRPKLNQDPTQWSSGICACFDDPQSCC 60

Query: 61  IGLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYA 120
           IG  CPCFLFGKNA+ LGS T+ GSC TH +LW L  ++CC+ T G++  VPG  VACYA
Sbjct: 61  IGAICPCFLFGKNAQFLGSGTLAGSCTTHCMLWGLLTSLCCVFTGGLVLAVPGSAVACYA 120

Query: 121 CGYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPT 180
           CGYR  LR+KYNLPEAPCGD  TH FCHLCAICQEYREIRER G   S   N   VTPP 
Sbjct: 121 CGYRSALRTKYNLPEAPCGDLTTHLFCHLCAICQEYREIRERTGSGSSPAPN---VTPPP 180

Query: 181 TQTME 185
            QTM+
Sbjct: 181 VQTMD 182

BLAST of MS000049 vs. ExPASy Swiss-Prot
Match: Q9LS43 (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.5e-21
Identity = 54/147 (36.73%), Postives = 83/147 (56.46%), Query Frame = 0

Query: 43  QWSSGICACFDDTQSCFIGLFCPCFLFGKNAEVLG-SRTMFGSCATHFILWALTNAVCCL 102
           QW+SG+ +C +D+++  +  FCPC  FG+ A++    RT  G C   + L      +CC+
Sbjct: 4   QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGL------ICCV 63

Query: 103 LTDGVLWNVPGCFVACYACGYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRER 162
           +       +P      ++C YR ++RSK+ LPE+P  D VTHFFC  CA+CQE+RE++ R
Sbjct: 64  V------GLP----CLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTR 123

Query: 163 A-----GGSGSHDLNLAVVTPPTTQTM 184
                 G SG+    +A   PP +Q M
Sbjct: 124 GLDPSIGWSGNMQRTMA---PPMSQQM 131

BLAST of MS000049 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.7e-20
Identity = 49/130 (37.69%), Postives = 73/130 (56.15%), Query Frame = 0

Query: 32  AAPIESKDGLTQWSSGICACFDDTQSCFIGLFCPCFLFGKNAEVLGSRTMFGSCATHFIL 91
           A  ++++  +  WS+G+C CFDD  +C +   CPC  FG+ AE++   +   SC T   L
Sbjct: 35  AFAVQAQAPVAAWSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGST--SCGTSGAL 94

Query: 92  WALTNAVCCLLTDGVLWNVPGCFVACYACGYRKELRSKYNLPEAPCGDFVTHFFCHLCAI 151
           +AL      LLT        GC    Y+C YR ++R++Y L  +PC D   H  C  CA+
Sbjct: 95  YALV----MLLT--------GC-QCVYSCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCAL 149

Query: 152 CQEYREIRER 162
           CQEYRE+++R
Sbjct: 155 CQEYRELKKR 149

BLAST of MS000049 vs. ExPASy Swiss-Prot
Match: D9HP26 (Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.2e-20
Identity = 57/175 (32.57%), Postives = 79/175 (45.14%), Query Frame = 0

Query: 12  YVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFIGLFCPCFLFGK 71
           Y P    D  AG          P+      +QWSSG+  CFDD   C +  +CPC  FG+
Sbjct: 2   YPPKASGDPAAGAAPVT---GFPVGGPAASSQWSSGLLDCFDDCGLCCLTCWCPCITFGR 61

Query: 72  NAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVAC---YACGYRKELRS 131
            AE++       SC                 T G L+ V   F  C   Y+C YR ++R+
Sbjct: 62  VAEIVDRGAT--SCG----------------TAGALYAVLAYFTGCQWIYSCTYRAKMRA 121

Query: 132 KYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTTQTM 184
           +  LPE PC D + HF C  CA+CQ+Y+E++ R           A + PP+ Q M
Sbjct: 122 QLGLPETPCCDCLVHFCCEPCALCQQYKELKARGFDPVLGWDRNATMLPPSAQGM 155

BLAST of MS000049 vs. ExPASy TrEMBL
Match: A0A6J1DGB7 (protein PLANT CADMIUM RESISTANCE 10 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019824 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.0e-111
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60
           MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI
Sbjct: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60

Query: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120
           GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC
Sbjct: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120

Query: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180
           GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT
Sbjct: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180

Query: 181 QTMEPNQEK 190
           QTMEPNQEK
Sbjct: 181 QTMEPNQEK 189

BLAST of MS000049 vs. ExPASy TrEMBL
Match: A0A1S3B7G5 (protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.2e-92
Identity = 157/188 (83.51%), Postives = 168/188 (89.36%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60
           M G  SYVPPAYVPI QSDSE  IIS +E +  P + KDGL+QWSSGICAC DD QSCFI
Sbjct: 1   MDGPRSYVPPAYVPISQSDSETEIISRDESNPTPNQLKDGLSQWSSGICACCDDMQSCFI 60

Query: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120
           GLFCPCFLFGKNAE+LGS+T+FGSCATHFILWALTN VCCLL+DG+LWNVPGCF+ACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSQTIFGSCATHFILWALTNTVCCLLSDGLLWNVPGCFLACYAC 120

Query: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180
           GYRK LRSKYNLPEAPCGDFVTHFFCH CAICQEYREIRERAGGSGSH+LNL VVTPPTT
Sbjct: 121 GYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGSGSHELNLTVVTPPTT 180

Query: 181 QTMEPNQE 189
           QTME N E
Sbjct: 181 QTMESNPE 188

BLAST of MS000049 vs. ExPASy TrEMBL
Match: A0A0A0LH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 158/188 (84.04%), Postives = 166/188 (88.30%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFI 60
           M G  SYVPPAYVPI QSD EA I S +E +  P E KDGL+QWSSGICAC DD QSCFI
Sbjct: 1   MDGPRSYVPPAYVPISQSDLEAEISSRDESNPTPNELKDGLSQWSSGICACCDDMQSCFI 60

Query: 61  GLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYAC 120
           GLFCPCFLFGKNAE+LGSRTMFGSCATHFILWALTN VCCLL+DG+LWNVPGCF+ACYAC
Sbjct: 61  GLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLSDGILWNVPGCFLACYAC 120

Query: 121 GYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTT 180
           GYRK LRSKYNLPEAPCGDFVTHFFCH CAICQEYREIRERAGG GSH+LNL VVTPPTT
Sbjct: 121 GYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGYGSHELNLTVVTPPTT 180

Query: 181 QTMEPNQE 189
           QTME N E
Sbjct: 181 QTMESNPE 188

BLAST of MS000049 vs. ExPASy TrEMBL
Match: A0A6J1I689 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC111470294 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 159/190 (83.68%), Postives = 169/190 (88.95%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEG-HAAPIESKDGLTQWSSGICACFDDTQSCF 60
           M G  SYVPPAYVP+GQSDSEA IIS +EG H+ P E KDGL+QWSSGICAC DD QSCF
Sbjct: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGIHSTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYA 120
           IGLFCPCFLFGKNAE+LGSRTMFGSCATHFILWALTN VCCLLTDG+  N+PGC +ACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 121 CGYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPT 180
           CGYRK LRSKYNLPEAPCGDFVTHFFCH CAICQEYREIRERA GSG HDL+LAVVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180

Query: 181 TQTMEPNQEK 190
           TQTM+ N EK
Sbjct: 181 TQTMDSNPEK 190

BLAST of MS000049 vs. ExPASy TrEMBL
Match: A0A6J1GI45 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111454399 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.6e-90
Identity = 158/190 (83.16%), Postives = 168/190 (88.42%), Query Frame = 0

Query: 1   MVGRSSYVPPAYVPIGQSDSEAGIISSNEG-HAAPIESKDGLTQWSSGICACFDDTQSCF 60
           M G  SYVPPAYVP+GQSDSEA IIS +EG H+ P E KDGL+QWSSGICAC DD QSCF
Sbjct: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYA 120
           IGL CPCFLFGKNAE+LGSRTMFGSCATHFILWALTN VCCLLTDG+  N+PGC +ACYA
Sbjct: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 121 CGYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPT 180
           CGYRK LRSKYNLPEAPCGDFVTHFFCH CAICQEYREIRERA GSG HDL+LAVVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180

Query: 181 TQTMEPNQEK 190
           TQTM+ N EK
Sbjct: 181 TQTMDSNPEK 190

BLAST of MS000049 vs. TAIR 10
Match: AT2G40935.1 (PLAC8 family protein )

HSP 1 Score: 256.1 bits (653), Expect = 2.1e-68
Identity = 113/183 (61.75%), Postives = 136/183 (74.32%), Query Frame = 0

Query: 4   RSSYVPPAYVPIGQSDSEAGI--ISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFIG 63
           +  YVPP+Y+P+ QSD++  +   + N   A    +KD   QWSSGICACFDD QSC +G
Sbjct: 5   KGHYVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVG 64

Query: 64  LFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYACG 123
           LFCPC++FGKNAE+LGS T  G C TH I WAL N +CC  T+G L  +PGCFV+CYACG
Sbjct: 65  LFCPCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACG 124

Query: 124 YRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTTQ 183
           YRK LR+KYNL EAPCGDFVTHFFCHLCAICQEYREIRE++ GS   D+ +A+   P  Q
Sbjct: 125 YRKSLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQ 184

Query: 184 TME 185
           TME
Sbjct: 185 TME 187

BLAST of MS000049 vs. TAIR 10
Match: AT2G40935.3 (PLAC8 family protein )

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-59
Identity = 103/183 (56.28%), Postives = 126/183 (68.85%), Query Frame = 0

Query: 4   RSSYVPPAYVPIGQSDSEAGI--ISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFIG 63
           +  YVPP+Y+P+ QSD++  +   + N   A    +KD   QWSSG            +G
Sbjct: 5   KGHYVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGC-----------VG 64

Query: 64  LFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYACG 123
           LFCPC++FGKNAE+LGS T  G C TH I WAL N +CC  T+G L  +PGCFV+CYACG
Sbjct: 65  LFCPCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACG 124

Query: 124 YRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPTTQ 183
           YRK LR+KYNL EAPCGDFVTHFFCHLCAICQEYREIRE++ GS   D+ +A+   P  Q
Sbjct: 125 YRKSLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQ 176

Query: 184 TME 185
           TME
Sbjct: 185 TME 176

BLAST of MS000049 vs. TAIR 10
Match: AT2G40935.2 (PLAC8 family protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.7e-52
Identity = 85/125 (68.00%), Postives = 99/125 (79.20%), Query Frame = 0

Query: 60  IGLFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYA 119
           +GLFCPC++FGKNAE+LGS T  G C TH I WAL N +CC  T+G L  +PGCFV+CYA
Sbjct: 39  VGLFCPCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYA 98

Query: 120 CGYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERAGGSGSHDLNLAVVTPPT 179
           CGYRK LR+KYNL EAPCGDFVTHFFCHLCAICQEYREIRE++ GS   D+ +A+   P 
Sbjct: 99  CGYRKSLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPL 158

Query: 180 TQTME 185
            QTME
Sbjct: 159 AQTME 163

BLAST of MS000049 vs. TAIR 10
Match: AT3G18470.1 (PLAC8 family protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22
Identity = 54/147 (36.73%), Postives = 83/147 (56.46%), Query Frame = 0

Query: 43  QWSSGICACFDDTQSCFIGLFCPCFLFGKNAEVLG-SRTMFGSCATHFILWALTNAVCCL 102
           QW+SG+ +C +D+++  +  FCPC  FG+ A++    RT  G C   + L      +CC+
Sbjct: 4   QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGL------ICCV 63

Query: 103 LTDGVLWNVPGCFVACYACGYRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRER 162
           +       +P      ++C YR ++RSK+ LPE+P  D VTHFFC  CA+CQE+RE++ R
Sbjct: 64  V------GLP----CLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTR 123

Query: 163 A-----GGSGSHDLNLAVVTPPTTQTM 184
                 G SG+    +A   PP +Q M
Sbjct: 124 GLDPSIGWSGNMQRTMA---PPMSQQM 131

BLAST of MS000049 vs. TAIR 10
Match: AT3G18460.1 (PLAC8 family protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.8e-20
Identity = 58/187 (31.02%), Postives = 93/187 (49.73%), Query Frame = 0

Query: 2   VGRSSYVPPAYVPIGQSDSEAGIISSNEGHAAPIESKDGLTQWSSGICACFDDTQSCFIG 61
           V R + V      IGQ++ + G   +N+              WSS +  C +D+++  I 
Sbjct: 22  VNRDNQVHSQNGAIGQANIQTGRPVNNQTQ----------NLWSSDLFDCMNDSENAVIT 81

Query: 62  LFCPCFLFGKNAEVLGSRTMFGSCATHFILWALTNAVCCLLTDGVLWNVPGCFVACYACG 121
              PC   G+ AE++        CAT  +L+            G+++ +   FV  Y+C 
Sbjct: 82  CLAPCVTLGQIAEIVDEGAT--PCATGGLLY------------GMIFFIGVPFV--YSCM 141

Query: 122 YRKELRSKYNLPEAPCGDFVTHFFCHLCAICQEYREIRERA-----GGSGSHDLNLAVVT 181
           +R ++R+KY LP+AP  D++TH FC  CA+CQEYRE++ R      G +G+      V++
Sbjct: 142 FRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNVQAQQPVMS 182

Query: 182 PPTTQTM 184
           PPT Q M
Sbjct: 202 PPTGQRM 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022152000.11.2e-110100.00protein PLANT CADMIUM RESISTANCE 10 isoform X1 [Momordica charantia] >XP_0221520... [more]
XP_038903486.12.6e-9285.71protein PLANT CADMIUM RESISTANCE 10 [Benincasa hispida][more]
XP_008443175.11.7e-9183.51PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Cucumis melo][more]
KAE8651159.12.2e-9184.04hypothetical protein Csa_002610 [Cucumis sativus][more]
XP_004136605.12.2e-9184.04protein PLANT CADMIUM RESISTANCE 10 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q8S8T83.0e-6761.75Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=... [more]
B4FF801.3e-6260.54Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1[more]
Q9LS432.5e-2136.73Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 ... [more]
B6TYV84.7e-2037.69Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1[more]
D9HP266.2e-2032.57Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1DGB76.0e-111100.00protein PLANT CADMIUM RESISTANCE 10 isoform X1 OS=Momordica charantia OX=3673 GN... [more]
A0A1S3B7G58.2e-9283.51protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4... [more]
A0A0A0LH641.1e-9184.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1[more]
A0A6J1I6891.2e-9083.68protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1GI457.6e-9083.16protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
Match NameE-valueIdentityDescription
AT2G40935.12.1e-6861.75PLAC8 family protein [more]
AT2G40935.34.0e-5956.28PLAC8 family protein [more]
AT2G40935.23.7e-5268.00PLAC8 family protein [more]
AT3G18470.11.8e-2236.73PLAC8 family protein [more]
AT3G18460.14.8e-2031.02PLAC8 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006461PLAC8 motif-containing proteinPFAMPF04749PLAC8coord: 44..157
e-value: 5.1E-26
score: 91.4
IPR006461PLAC8 motif-containing proteinTIGRFAMTIGR01571TIGR01571coord: 43..159
e-value: 1.2E-36
score: 123.7
IPR006461PLAC8 motif-containing proteinPANTHERPTHR15907DUF614 FAMILY PROTEIN-RELATEDcoord: 3..187
NoneNo IPR availablePANTHERPTHR15907:SF177PROTEIN PLANT CADMIUM RESISTANCE 10coord: 3..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS000049.1MS000049.1mRNA