MS000020 (gene) Bitter gourd (TR) v1

Overview


Name	MS000020
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein sym-1
Location	scaffold946_1: 152025 .. 160091 (-)
RNA-Seq Expression	MS000020
Synteny	MS000020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTCTGTGGCGTCACTCTTTCTCTGAAATCTCCTCCCCTTTGTACTCGCTCGAGCTCTAATCGTGGACCCACTTTGCATTTCGGCCTGCAAGCTCCAAGTCTTGAAACCCCAGTTCAAATGAAGGGGCCTCTTGCCTGTTCATTCCGCCATAATCATCGATTGGAGTTTGAGGATTTGGGTCGACTTCAAATGCAATGTGGGTCGCTGAGATTTACGAATTTCCGAATTTCAGCGAGCTCTGGTGATGGCTCTGGTTCTGGCTCTGGCTCTGGAGGCGGTGATGGTGGATATGGAGGTGAAAATTATGGAGGGGGAGAAGGGGATGGCGGCAAAGGCGGGAAAGATTGGTCCTTCTTGTCATGGTAATGTTTCTCATTACAGATTAGTACTCCATTTCTCTTTTATTAGTTGGTTGCCACATTTTCATCTCTGCATGTATTCAAGCCTTTAAATCATTTGGCGAAGGTGCTTTCTAAGTTTCTAACACTTAAAGCCATTGATGGCTCGACTAACATTTTGAGTTGGTGCTTGTAGTCACACATGCTTCCTCCCTGTTGAAGGGCAATAATTTTTTTCTTATGATAAAGATGGACAAAATCATGAGTGATTTGAGCTTCATCCTATGCTAATCTAGCTGCCCTCTTGTTTGTCCATTGAAACTAAGCAAGCGTCTTATGTTCTAGACTAATTATTACAACTTCTTGCTGGAGCTCTAAGGCACGTGATTAATAGAGGAACCTTGTGTGCAGAACACCCGTCCATCGAGATCCTAAATGTCAACCATTCTAGTTTTCCTTCACTGATTCCACAGCCAATAAGTTCCTTATATTTTTGCAATTTGCTCAACTCTCTGTCCACTAGTACTTGGGTGGGTTTTAATGTGCTCCGTGTTAAGCTTTAGACGGGCCATAAATACCTGATATCCCAGGAGAAACTATTAGCATGTAAGAGCTTGAGGGGTAGGGCATCTGCACCATCCATAACTTCTTTAGTTGTGAAAGAGGCATGGTTTTAGAGGATAAGAATGCCCTCGACTGATCCAACAACGTCTGAAGCCGCCCAAATGATCCCATGAGAGCTCCATAAGGACTTTATAATTGGAATTGTCCTAGTGGTGATAGAGAGCTTAGCAAGAAGCCTTTCTTCTTTAAAGAGTTCCAATCACCCATGACTTTGGCTGCCTCTAAAATCACATCCAAGATTGGTTTTCCTTCCACAAAGCATCTTAAAGCTTCATCAATAATGAAAAGGGAGGACTTTCTTCAATCCACTCGCCAAAACTTTAGCAACTATTTTATAAAGGGAAGAGACCAAACACCAAACTGATGGGCCTAAATTCATGCATTCAATTTGCGTCTAACTTCTTCGGGATAAGGCAGACATAAGTCTTATTGGTGCGCAAATTAATGAGTTCATTTTTAGAAAGTCTTGGAACACCCTTACTAGATCTGATTTCAGGATGTTCCAAGTTTTTTATTTTTTATTTTTTTATTTATAGAACTCATTTGACATCCCGTTGGGGCCTAATGATTTCAAATTCCCTAGCTCATCACTACTTTTGTATTTCTTCCTCACGGAAAGGAGACTCCACCCCGTCTTTCCACCCTTACTGGAAGAGGGACCAATTCAGGCCCTCAAAAATAAACATTCGATCCTCAGACTTGGAATATAAATCGCTGAAAAAGTCCAGTACCTATTTCCTATCTAGTTCTCTGAAGAGAGAAGGTTCCCATCCCTGTCTTATAGCGTTAAAATTGAAGCTCTACTTTTTCTTGCAGAGGCCCATTTATGGAAGAAATGAGCGTTCTCTTCTCACCCCTTCGCTGCAACTTACATTTATGGGCCCAAATTCTTTGCTCTTTTAAAGCTACCTCCATTAGGTCTAACATCAAGGAGGATCTCAAAGCCATATATGCTTATTAGAAAGAGTGCCTCTTTCTTCTATCTTGTCTATCTCATCAATTTTGTCTTGGATATCTCTTTTAGAATTGTCAACATAATAAAAACCCTTTGTCTGCCATGTAATCAAGTGCTGTCTAAGACTCTTTTGCTTCTCCATGGAAGAATAACCAGGCCAACCATTCAGATTCATTGAGGCCCCAATAGGATTCTACATTGACTAAAAATTGAGGATGATGTAGCTGACTATTTCCGAAACGAAAAGGGACGGATCCCATTTCTACACCCCAAGATTTATCTGTAGGGAGAAATGGTCAGAGGTGCTGCATGACTGTCTGTACAAGGAGATCTCTTTAAAAGCTTGAAACCAACTCCGAGACAAGAGGAATTTGTGGAATTTGTGGAATTTGTCTATACTAGTGGAGAGGTTTTCTCTAAATTGGACCAAGTGAGCAATCCATTTTTCATGGGAATATCCTTTATCTTAAGCTCTTCTATCAACGAGTTAAAATCTTTCATATTTCTCGTTGTCCTCAAATTTCTCTAGAGGAGATCTCCTCTAGAACAAAGACTTGAAAGATCCATCAGCTCTTGCCAAAAGTCATCTCGACCTCTGGAAGATGAAGGACCACATGATCCATCACCTGAAAACATTGTTAAAAGAAATTAGAATAGAATTAGAGATAGAAAAGGCCCCTAAAGCATAGTCTTCTAAAGCAAAGTTGGCTCAGTCGAGCAAAGTTGACTCAATCTGTCGAACTTTTAGAGAACGAAATAACTACCTTTCTATCAGACTTAGCCAACTTCATCTCCCAAAAAATCACTACATCTGGATCCACTTTGTACACCACGGAATCTTTAATCAAGACTCTTTTGGAGGGAGCTCCTGACCCCTGGCATTCCATGAGACAATCTTCATGGACAACCTTCTTTTTCCTTCCATATGCTACTTTCTTCATTCTCTACTTCCCTCTTCCATGTTCTTTGAAAGTTCGACAGCTCCCTCGTACCTTTCTTCTTAGTTTCACTACCTTTGATGTTGTTATTTCCTTTGGAATGATGGGTCTAATGCACATATTGTATTTTTTCAAGGATTTCACCACTTTCCGTGTAAACGGGAACTGGGCCTCGTTCTCTAACTCTTTCTCTTCCTCTCACTCTTCCTCCACCGCTTCCTCTAACTCTTATTGTTCCACCCTTTGGATCCTATCTTATTGAGATTGGACGTTGACTAAATCCAGGCCCATGGGATGTATATTCGCTAAATTTTCCCGTACCTAAAAACATCTCTTTGCATATGGTTGGTATCATGGCCCATTAGGAGATGGATGAGTGATGGAGATGAGTCTCTTTGCAACTCTGAACTATGAGCATCATTGTTGATATCTTTCGATGAACCTGCATATCCCTCAACTTACCTAGCCATTGCATCTCAAGCATCACGTAGCTTCCCGTCTGAGTGTCTCCTTAGTCCTCAGCTTCATAGTATGAAGCGAGGTGATCTTTGTGATCAAGTTCAATGATAGTTCTACCACCTTCCACAACTACTCTTCTACAAGCAGCTGAGTGATAGAACAATAATAGGACTTGGGAAGCACCATCTTCAAAGACATTAAGCACATTTGTCCAGCACCAAAAGCCATAGGGCAATGAACAATAGTCCTTGCTTTTGCATGTGTCTGACAGTGTATCTTTCCTCACATGAAAATAAAGGCCTTTCTTCCTTCTCTTTTGCAACGCAACATCTGTCAAACACTTGAAATGAGGTGTCACTCCTGAAGTATACCCTTGGCTGAACCCTTGTCATGTTGTTTCTCCCCCCATAACTAGCTGGTCAAATATTGTATGGAAATGGGTCCAAGAGTATAGCAAATAGTTTGATTACCATGCCTCCCTTGCACCCTTACCTTAACAATTGATTTGGATCCTCTACGAAGTGGGACCTCCATTATTGCAATTAGGCCTTCTAGCTTCAACGTACATACCTGTATCTCTACCTTCAATCCATTATGAAGTTGCCTCACAACACCCTGTTGGATATATTCAGATCAAATTGTCTTTGGTTTACCTCACACGCTACTACTGATATGATAACTGAAATCAAGCCAAAAGCACAAGCTTGAACTTGGATCACGTTCGGAGAGATTTCCTACTCCATCTCAGTGTCAACCCTATGCCTTCTCTCCTCTACCAGGCTAATNTCAAAAAAAAAAAAAAAAAAAAACTCCTTACATCTTCTCTTTAATGGTCATCTAGCTTAGCTCATAATATAATTTTGTCTAGAAATTTCAACGATTTAAGTTCAATTTCACATGCCTCTCGACCTATAATTATGTGATGTTAATCTCAACTCCAAAGAAGCAACCTTGTGGTCCTCGGTAGTATTTACAACTCTTTCAAAAATATGGTCAGAGAGAAACTCTTGGAGTTTTGGTAATAGGCATAAGATTAGGTAGAATTGTGGGATCGGTTCATCTTATGAGCTCCTATTGGTGTACTCTCTACTTTTTGTAATCGCAGCTTCTTTCTGGCAGTAGATACTATGTATCGCTTTTTAAGCTCTCTTGGTTATTTCTTCCACTGAATGGGAATTTTTTTTTTATCCAAAAAAAGTAACTGGGGTACTATTACTTTCATAGGGGAGGAAACTGTGCATTCTTATAATGGGATTAGAAGTCATAGTGGAAGTTTTATTATCTGGAGACCACTATTATAGGGTTGAGGAAAATTTGGTAAGTTTTATGTACTGGGAAAATAGAACTCTCCTTCAAGTTTGAACTGTAGTCCAGTCGTGCATATTGTTCTGCCTCAACATGCCCAACTTTTCCTTGGGGGTACAGTGATTGGAATCCGTGGAGGTCCTATATCTTCCATTGACGAAACAAATTAATATAACATACCTATAGATCTTACTCAAGTCTGGCCTTTGCTCGTAGCTAACTAAGTTGACAAGAGAAGCCTCTAATGCAATTAACGATGGACAAACTTTATCCTCTCCTGCCACCTTTGAGATGGAGTTGTACCAATCTTCGCATCAATCTAAAATTTATTTCCTGCTTTTAGACATGTGAGTTATCAAGTATGGCTGAAGGAAAACATAAATTCCATCATACTGAGTTCGTCTGTGTCAATTGTCATTTTTAATGTGCAGTACTTGTGCTTGTTTATATGTAGTCCATCTTATGTGACAAAAATGTGTATTGTTGGAGCAATAACAGTTTATTTGACTGTACTTTCTTTGTCATCTTGTTCACTGTTTCAAATTTTGAGGAGTGTTATGTTTAGGCTGCATTTACTACAAGGAATAGCAATGAGAAAGGAATTAGAATCATAGATCCTTCGATGTTGTTTACCAAAACGGTACAGAATCGGAATAGGAATTAGATATATAACAATTACTAGTATACTCCTTTCTTATTTATAGCTAATTACAAATATATTGGGCTAATATTTTTTTGTTAATTTAAATTTTAATATATTTATTACTATGATAGTAAATATTTTGTAATATAACAATTTATTTAATATTAACAAAAAATAAATAATTAAAATAAAAATTACATCTAACTAAAGTAATTTTTTTATCAGAACAACCATCATTAATATAAAATATTATTAAATTTTATTGTTCTAATATTTAATAATAATAAATTATGTTTTAACAATTTTATTGATATTAATTAACAATAACAATTAAATTAAATAATATTTTATAATAAAATCACAGCAACTAATAAAAGTTGTATAAATTTTTATTAAAAGAAAAATTATAACTAGTGTAAATAAACAAAGAAATAATAAAAGTGTAAAATAATTGATTAAAAAGTTATGGATCTCATTAATAGACGAGGGAGAAAGGGTAAAAGTTGTAAAGTAATTATTAAAAAAGTATGGGCCCATGACATAAGAAATGAGAATGAGATTGATGAGGTCGTAGGAAATGAATGAGATTATACCTTTTTAGGAGAGAATTCCAAATTTTGAGGTGAGTCCCACCAATTGATCTCATTCCTACAATTTAGTAAACACCATCGAAGGGAATGATAATTTTGATTCCCATTCCTTGATTTTCATTCCCTTAAAGTAAACGGGGCCTTAGTTCCTATTGGTATTTTGTTTGATTTTCAGTCGAATGTGAATTTGTTGTCGGCAAATGGTATTAAGTTGGGAATTGGTTTCAGATCTCTTGGCTTCTATTTACAAGATTTAATCAGAAACAAGTTTCCCACTCCTAATTTTTTGTTATTTGTCGAAACCAACTTACTTAGTTTTATTTCAGGTATTTGGCTCTTCTTGCAAAGTACCCTGTTTTGGTGAAATCTGTAACATCTGGAATACTAAATGGTTTGGGAGACTTAATTTGCCAGGTTTGCCTCCTAATATATGTACCAACAACTTCATTTATGTCCATCATATAGGACCATTGGTTTATGTTTCTCTAGGAATCTGTGAGCTTTCAATGTGACTTTCAATGATGACTTTGTTGAAGACTCTGTTTCAAGATCCTAGAAAGTGGTGATAATCATGAGTTTTTGAGATCCATATAAGCTTTATCCTTGTGAGCCTTACGGCCTTGCAATAAGATGTCTATTTAATTTCACAGAAAATTAACAACGAGGACAATTTTGATAAAATTGTTCTCCTTTTTTTTGATAAAATTGTTCATATTGAATAAAAATACAAGAAAATGTGAATATGTTGTGGACATATCATATAGTATACTTATTAGGTTATTTTTGCAAACCCACATTACTCTACATTGGCAGTAGAATGCTAGAAGCCTAGAACAATTTCAATTTTATGTACCTGTATTATCATGAAGAATTGGGGGCATTGAGCATCTTGGAGATATAACACATATTTTTCTTTATCTTTGATCTTACTTAGTATCTGTTTACTTTCAGAATGTTGCATCCTCGCATCACCAGCTTAATAATATGCTTCTTTTGTAAGAACTATCATACTAAACGCTTATCATCTTCGAATAGCTTGTGTTTGAAAACTCACCATCGGCAGATCTGAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTTGGTCCTGCATTGCATTACTGGTATTCCTTCAAAATCCTTCCCTGTACCATGAGTCCACAGCTATTTTACCTCATTAGAAGTTACCTCTTAAAATCCTGGAGCATGTCAATATTTTGTCAATGTCGCCTAGTTGGTTAGATCTTAAGGTCGAAACCCATGATTATAGGCTATTTACACATTTGTTTATGTTAATGGGAAATGAAATAAAATTCTTAGATCTTGTTTGATAACCATTTTGTTTTTGAAAAATTAGCTTATACGCTAATTCCACCTATATGCTCTATTTTGTTTTCGACTTTTTTAAAACGTTTTTAAAATTTAAGTCAATTTTTGAAAACTACAAAATTGATTTTAAAAACTTAGGTTTTTTTCTTTTGAAAATTTAGTTGAGAATTTAAATGTGTCTCTAAAAAATTGTGGGAAACCAAAAAAATTGAGAGGAAACCAGTACACAATTTGTAAATGAAGAATACTATAACCAAAATCATTATCAAACTGGGCCTCAGTGTTTTTGAATTGATATTTGTAGTCCTTTTTAAGACTATTTCCATCTTCTCGAATATTGTTAGATACTCTTTTTTCTTAATAAGCAACTTTGTTAGATACTTTTTTAATAGATGAATACATGTAGGTACTTGTATCTAAGTAAATTGGTGACCATGCCAGGAGCTTCAGGTGCATTCTTGCGCCTCCTTCTTGATCAGGTATTATTGAAAGAGCTGTTAGATATTCTTAATAAGTACTTTTCCTGAAGTATCCTGTTTCTGAATGTAATGTAAACAAACAATTGCAGTTCATTTTTACTCCGGTATTCCTTGGAGCCTTCCTAACCGGATTAGTAACACTCGAAGGGCGGCCATCACACGTTATTCCTAAGCTTCAACAGGTGCCATTTGAACATATTCCGCTCCAACAAGAGAAGCAATCTGTTATTTGATATGCTTTTCAGCCTCAAACTTCATAGTATTGTTATCTAATATTCCTTTTTTGAACCTTTTTTGCTTCATAGGAGTGGTTTTCTTCTGTTGTGGCTAACTGGAAACTATGGATACCTTTCCAGTTTTTCAACTTTAGATTTGTTCCGCAGCAGTTCCAGGTA

mRNA sequence

ATGGTTCTCTGTGGCGTCACTCTTTCTCTGAAATCTCCTCCCCTTTGTACTCGCTCGAGCTCTAATCGTGGACCCACTTTGCATTTCGGCCTGCAAGCTCCAAGTCTTGAAACCCCAGTTCAAATGAAGGGGCCTCTTGCCTGTTCATTCCGCCATAATCATCGATTGGAGTTTGAGGATTTGGGTCGACTTCAAATGCAATGTGGGTCGCTGAGATTTACGAATTTCCGAATTTCAGCGAGCTCTGGTGATGGCTCTGGTTCTGGCTCTGGCTCTGGAGGCGGTGATGGTGGATATGGAGGTGAAAATTATGGAGGGGGAGAAGGGGATGGCGGCAAAGGCGGGAAAGATTGGTCCTTCTTGTCATGGTATTTGGCTCTTCTTGCAAAGTACCCTGTTTTGGTGAAATCTGTAACATCTGGAATACTAAATGGTTTGGGAGACTTAATTTGCCAGCTTGTGTTTGAAAACTCACCATCGGCAGATCTGAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTTGGTCCTGCATTGCATTACTGGTACTTGTATCTAAGTAAATTGGTGACCATGCCAGGAGCTTCAGGTGCATTCTTGCGCCTCCTTCTTGATCAGTTCATTTTTACTCCGGTATTCCTTGGAGCCTTCCTAACCGGATTAGTAACACTCGAAGGGCGGCCATCACACGTTATTCCTAAGCTTCAACAGGAGTGGTTTTCTTCTGTTGTGGCTAACTGGAAACTATGGATACCTTTCCAGTTTTTCAACTTTAGATTTGTTCCGCAGCAGTTCCAGGTA

Coding sequence (CDS)

ATGGTTCTCTGTGGCGTCACTCTTTCTCTGAAATCTCCTCCCCTTTGTACTCGCTCGAGCTCTAATCGTGGACCCACTTTGCATTTCGGCCTGCAAGCTCCAAGTCTTGAAACCCCAGTTCAAATGAAGGGGCCTCTTGCCTGTTCATTCCGCCATAATCATCGATTGGAGTTTGAGGATTTGGGTCGACTTCAAATGCAATGTGGGTCGCTGAGATTTACGAATTTCCGAATTTCAGCGAGCTCTGGTGATGGCTCTGGTTCTGGCTCTGGCTCTGGAGGCGGTGATGGTGGATATGGAGGTGAAAATTATGGAGGGGGAGAAGGGGATGGCGGCAAAGGCGGGAAAGATTGGTCCTTCTTGTCATGGTATTTGGCTCTTCTTGCAAAGTACCCTGTTTTGGTGAAATCTGTAACATCTGGAATACTAAATGGTTTGGGAGACTTAATTTGCCAGCTTGTGTTTGAAAACTCACCATCGGCAGATCTGAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTTGGTCCTGCATTGCATTACTGGTACTTGTATCTAAGTAAATTGGTGACCATGCCAGGAGCTTCAGGTGCATTCTTGCGCCTCCTTCTTGATCAGTTCATTTTTACTCCGGTATTCCTTGGAGCCTTCCTAACCGGATTAGTAACACTCGAAGGGCGGCCATCACACGTTATTCCTAAGCTTCAACAGGAGTGGTTTTCTTCTGTTGTGGCTAACTGGAAACTATGGATACCTTTCCAGTTTTTCAACTTTAGATTTGTTCCGCAGCAGTTCCAGGTA

Protein sequence

MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFEDLGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALVGPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV

Homology

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BLAST of MS000020 vs. NCBI nr
Match: XP_022152060.1 (protein sym-1 [Momordica charantia] >XP_022152061.1 protein sym-1 [Momordica charantia])

HSP 1 Score: 526.9 bits (1356), Expect = 9.9e-146
Identity = 266/269 (98.88%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MVLCGVTLSLK PPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED
Sbjct: 1   MVLCGVTLSLKPPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSF 120
           LGRLQMQCGSLRFTN RISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSF
Sbjct: 61  LGRLQMQCGSLRFTNLRISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSF 120

Query: 121 LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALVGPA 180
           LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFE SPSADLKRTFRFSLLGLALVGPA
Sbjct: 121 LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFEKSPSADLKRTFRFSLLGLALVGPA 180

Query: 181 LHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQE 240
           LHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQE
Sbjct: 181 LHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQE 240

Query: 241 WFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           WFSSVVANWKLWIPFQFFNFRFVPQQFQV
Sbjct: 241 WFSSVVANWKLWIPFQFFNFRFVPQQFQV 269

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BLAST of MS000020 vs. NCBI nr
Match: XP_038903823.1 (protein sym-1 [Benincasa hispida])

HSP 1 Score: 440.7 bits (1132), Expect = 9.4e-120
Identity = 228/272 (83.82%), Postives = 237/272 (87.13%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MV CG+TLSLK P LCTR   N GP   FGLQAP L TPVQMKG   CSFRHNHRLEF D
Sbjct: 3   MVPCGLTLSLKPPTLCTRFRFNGGPISGFGLQAPILGTPVQMKGTCVCSFRHNHRLEFND 62

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGG---ENYGGGEGDGGKGGKD 120
           +GR QMQ GSLRFTNFRISASSGDGSG G GSGGGDGGYGG   EN GGGEGD  KGG +
Sbjct: 63  VGRRQMQRGSLRFTNFRISASSGDGSGDGFGSGGGDGGYGGYGHENSGGGEGDSDKGGDN 122

Query: 121 WSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALV 180
           WS LSWYL LLAKYP LVKSVTSGILN LGDLICQLVFE +PSADL+RTFRFSLLGLALV
Sbjct: 123 WSLLSWYLTLLAKYPALVKSVTSGILNALGDLICQLVFEEAPSADLRRTFRFSLLGLALV 182

Query: 181 GPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKL 240
           GPALH+WYLYLS+LVT+PGASGAFLRLLLDQFIFTPVFLG FL GLVTLEGRPSH+IPKL
Sbjct: 183 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFIFTPVFLGVFLAGLVTLEGRPSHIIPKL 242

Query: 241 QQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           QQEWFSSVVANWKLWIPFQF NFRFVPQQFQV
Sbjct: 243 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQV 274

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BLAST of MS000020 vs. NCBI nr
Match: XP_023539960.1 (protein sym-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440.7 bits (1132), Expect = 9.4e-120
Identity = 226/272 (83.09%), Postives = 244/272 (89.71%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           M+L G TLSL+ PPLCTRS+ N GP+L FGLQ  SLETPVQ+KG  ACSF H+HRLEF+ 
Sbjct: 1   MLLRGATLSLQHPPLCTRSTFNGGPSLRFGLQTRSLETPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGG---ENYGGGEGDGGKGGKD 120
           +GR QMQCGSLRFTNFRISASSGDGSG G GSGGG  GYGG   E+ GGGEGD GKGG +
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALV 180
           WSFLSWYL LLAKYPVLVKSVTSGILN LGD ICQLVFE++PSADLKRTFRFSLLGLALV
Sbjct: 121 WSFLSWYLFLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180

Query: 181 GPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKL 240
           GPALH+WYLYLS+LVT+PGASGAFLRLLLDQF+FTPVFLGAFL GL+TLEGRPSH+IPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           QQEWFSSVVANWKLWIPFQF NFRFVPQQFQV
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQV 272

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BLAST of MS000020 vs. NCBI nr
Match: XP_022937869.1 (protein sym-1-like [Cucurbita moschata])

HSP 1 Score: 440.3 bits (1131), Expect = 1.2e-119
Identity = 226/269 (84.01%), Postives = 244/269 (90.71%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MVL G TLSL+ PPLCTRS+ N GP+L FGLQA SLETPVQ+KG  ACSF H+HRLEF+ 
Sbjct: 1   MVLRGATLSLQHPPLCTRSAFNGGPSLRFGLQARSLETPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSF 120
           +GR QMQCGSLRFTNFRISASSGDG GSG G G G GGYG E+ GGGEGD GKGG +WSF
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGFGSG-GGGDGYGGYGREDSGGGEGDSGKGGDNWSF 120

Query: 121 LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALVGPA 180
           LSWYL+LLAKYPVLVKSVTSGILN LGD ICQLVFE++PSADLKRTFRFSLLGLALVGPA
Sbjct: 121 LSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALVGPA 180

Query: 181 LHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQE 240
           LH+WYLYLS+LVT+PGASGAFLRLLLDQF+FTPVFLGAFL GL+TLEGRPSH+IPKLQQE
Sbjct: 181 LHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKLQQE 240

Query: 241 WFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           WFSSVVANWKLWIPFQF NFRFVPQQFQV
Sbjct: 241 WFSSVVANWKLWIPFQFLNFRFVPQQFQV 268

[Close]

BLAST of MS000020 vs. NCBI nr
Match: KAG6596182.1 (hypothetical protein SDJN03_09362, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 439.1 bits (1128), Expect = 2.7e-119
Identity = 226/272 (83.09%), Postives = 244/272 (89.71%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MVL G TLSL+ PPLCTRS+ N GP+L FGLQA SLETPVQ+KG  ACSF  +HRLEF+ 
Sbjct: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLETPVQIKGTHACSFSRSHRLEFKV 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGG---ENYGGGEGDGGKGGKD 120
           +GR QMQCGSLRFTNFRISASSGDGSG   GSGGG  GYGG   E+ GGGEGD GKGG +
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGSGDSFGSGGGGDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALV 180
           WSFLSWYL+LLAKYPVLVKSVTSGILN LGD ICQLVFE++PSADLKRTFRFSLLGLALV
Sbjct: 121 WSFLSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALV 180

Query: 181 GPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKL 240
           GPALH+WYLYLS+LVT+PGASGAFLRLLLDQF+FTPVFLGAFL GL+TLEGRPSH+IPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           QQEWFSSVVANWKLWIPFQF NFRFVPQQFQV
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQV 272

[Close]

BLAST of MS000020 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-20
Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 121 LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLV----FENSPSADLKRTFRFSLLGLAL 180
           L+ YL LL  YPVL K+V+SGIL+ LG+L+ Q +     ++S   ++    R+ + GL +
Sbjct: 22  LAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFV 81

Query: 181 VGPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHV-IP 240
            GP  HY YL++   V       +  RLLLD+  F P FL  F   +  LEG+   V + 
Sbjct: 82  TGPLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNVSVFVA 141

Query: 241 KLQQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           K++  ++ ++  NW++W P QF N  +VP QF+V
Sbjct: 142 KMRSGFWPALQMNWRMWTPLQFININYVPLQFRV 175

[Close]

BLAST of MS000020 vs. ExPASy Swiss-Prot
Match: Q07066 (Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 121 LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLV----FENSPSADLKRTFRFSLLGLAL 180
           L+ YL  L  YPV+ K+V+SGIL+ LG+L+ Q++     ++S S ++    R+ + GL +
Sbjct: 22  LAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLVYGLFV 81

Query: 181 VGPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHV-IP 240
            GP  HY YL++   V          RLLLD+  F P FL  F   +  LEG+   V + 
Sbjct: 82  TGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNISVFVA 141

Query: 241 KLQQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           K++  ++ ++  NW++W P QF N  +VP QF+V
Sbjct: 142 KMRSGFWPALQMNWRMWTPLQFININYVPLQFRV 175

[Close]

BLAST of MS000020 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-20
Identity = 56/167 (33.53%), Postives = 88/167 (52.69%), Query Frame = 0


Query: 110 DGGKGGKDWSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFEN------SPSADL 169
           + G G      LS YL LL  YPVL K+ TSGIL+ LG+ + QL+ +       S   D+
Sbjct: 11  EAGLGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDV 70

Query: 170 KRTFRFSLLGLALVGPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGL 229
               R+++ G    GP  H++YL + + +          RLLLD+ +F P FL  F   +
Sbjct: 71  SGPLRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVM 130

Query: 230 VTLEGRPSHVI-PKLQQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
             LEG+ +     K++  ++ ++  NW++W P QF N  ++P QF+V
Sbjct: 131 NFLEGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRV 177

[Close]

BLAST of MS000020 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.9e-20
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 0


Query: 124 YLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSA--DLKRTFRFSLLGLALVGPAL 183
           Y AL+AK+P  V+ +T+G L G+GD+I Q + E    A  + +RT +   +G   VGP +
Sbjct: 8   YQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGFFFVGPVV 67

Query: 184 HYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEG-RPSHVIPKLQQE 243
             WY  L KLVT    S A  ++L+DQ  F P FLGAFL    TL G      + KLQ++
Sbjct: 68  GGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEENVAKLQRD 127

Query: 244 WFSSVVANWKLWIPFQFFNFRFVP 265
           +  ++++N+ LW P Q  NF F+P
Sbjct: 128 YTDALISNYYLWPPVQIANFYFIP 151

[Close]

BLAST of MS000020 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.7e-20
Identity = 52/146 (35.62%), Postives = 82/146 (56.16%), Query Frame = 0


Query: 122 SWYLALLAKYPVLVKSVTSGILNGLGDLICQ---LVFENSPSADLKRTFRFSLLGLALVG 181
           S YL+ L KYPV  K+VTSG L  + D + Q   L  +     D KR+ R ++ G A+ G
Sbjct: 13  SHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTG 72

Query: 182 PALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGR-PSHVIPKL 241
           P  HYW+ YL K         AF++L +DQ + +PVF   F +G+  LEG+    ++ KL
Sbjct: 73  PLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKL 132

Query: 242 QQEWFSSVVANWKLWIPFQFFNFRFV 264
           +++W ++ V++  +W    F NF ++
Sbjct: 133 KKDWLTTYVSDCVVWPFINFVNFAYI 158

[Close]

BLAST of MS000020 vs. ExPASy TrEMBL
Match: A0A6J1DGH9 (protein sym-1 OS=Momordica charantia OX=3673 GN=LOC111019867 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.8e-146
Identity = 266/269 (98.88%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MVLCGVTLSLK PPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED
Sbjct: 1   MVLCGVTLSLKPPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSF 120
           LGRLQMQCGSLRFTN RISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSF
Sbjct: 61  LGRLQMQCGSLRFTNLRISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSF 120

Query: 121 LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALVGPA 180
           LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFE SPSADLKRTFRFSLLGLALVGPA
Sbjct: 121 LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFEKSPSADLKRTFRFSLLGLALVGPA 180

Query: 181 LHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQE 240
           LHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQE
Sbjct: 181 LHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQE 240

Query: 241 WFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           WFSSVVANWKLWIPFQFFNFRFVPQQFQV
Sbjct: 241 WFSSVVANWKLWIPFQFFNFRFVPQQFQV 269

[Close]

BLAST of MS000020 vs. ExPASy TrEMBL
Match: A0A6J1FCF7 (protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111444129 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.9e-120
Identity = 226/269 (84.01%), Postives = 244/269 (90.71%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MVL G TLSL+ PPLCTRS+ N GP+L FGLQA SLETPVQ+KG  ACSF H+HRLEF+ 
Sbjct: 1   MVLRGATLSLQHPPLCTRSAFNGGPSLRFGLQARSLETPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSF 120
           +GR QMQCGSLRFTNFRISASSGDG GSG G G G GGYG E+ GGGEGD GKGG +WSF
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGFGSG-GGGDGYGGYGREDSGGGEGDSGKGGDNWSF 120

Query: 121 LSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALVGPA 180
           LSWYL+LLAKYPVLVKSVTSGILN LGD ICQLVFE++PSADLKRTFRFSLLGLALVGPA
Sbjct: 121 LSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALVGPA 180

Query: 181 LHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQE 240
           LH+WYLYLS+LVT+PGASGAFLRLLLDQF+FTPVFLGAFL GL+TLEGRPSH+IPKLQQE
Sbjct: 181 LHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKLQQE 240

Query: 241 WFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           WFSSVVANWKLWIPFQF NFRFVPQQFQV
Sbjct: 241 WFSSVVANWKLWIPFQFLNFRFVPQQFQV 268

[Close]

BLAST of MS000020 vs. ExPASy TrEMBL
Match: A0A1S3B718 (protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.7e-119
Identity = 224/272 (82.35%), Postives = 239/272 (87.87%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MV CG+TLSLK P LCTR S N G    FGLQAP LETPVQMKG   CSFRHNHRLEF D
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRHNHRLEFND 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGG---ENYGGGEGDGGKGGKD 120
           +GR QMQCGSLRFT+FRISASSGDGSG G GSG GDGG+GG   EN GGGEGD GK G +
Sbjct: 61  VGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSGKSGNN 120

Query: 121 WSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALV 180
           WSFLSWYL LLAKYP LVKS+TSGILN LGDLICQ+VFE +PSADL+RTFRFSLLGL LV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKL 240
           GPALH+WYLYLS+LVT+PGASGAF+RLLLDQFIFTPVFLG FL+GLVTLEGRPSH+IPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           QQEWFSSVVANWKLWIPFQF NFRFVPQQFQV
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQV 272

[Close]

BLAST of MS000020 vs. ExPASy TrEMBL
Match: A0A5D3DPM1 (Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.7e-119
Identity = 224/272 (82.35%), Postives = 239/272 (87.87%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MV CG+TLSLK P LCTR S N G    FGLQAP LETPVQMKG   CSFRHNHRLEF D
Sbjct: 1   MVPCGLTLSLKPPILCTRISFNGGHISAFGLQAPILETPVQMKGTRVCSFRHNHRLEFND 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGG---ENYGGGEGDGGKGGKD 120
           +GR QMQCGSLRFT+FRISASSGDGSG G GSG GDGG+GG   EN GGGEGD GK G +
Sbjct: 61  VGRRQMQCGSLRFTDFRISASSGDGSGDGFGSGAGDGGHGGYGHENSGGGEGDSGKSGNN 120

Query: 121 WSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALV 180
           WSFLSWYL LLAKYP LVKS+TSGILN LGDLICQ+VFE +PSADL+RTFRFSLLGL LV
Sbjct: 121 WSFLSWYLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLV 180

Query: 181 GPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKL 240
           GPALH+WYLYLS+LVT+PGASGAF+RLLLDQFIFTPVFLG FL+GLVTLEGRPSH+IPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           QQEWFSSVVANWKLWIPFQF NFRFVPQQFQV
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQV 272

[Close]

BLAST of MS000020 vs. ExPASy TrEMBL
Match: A0A6J1I1Z8 (protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111470168 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.2e-119
Identity = 225/272 (82.72%), Postives = 244/272 (89.71%), Query Frame = 0


Query: 1   MVLCGVTLSLKSPPLCTRSSSNRGPTLHFGLQAPSLETPVQMKGPLACSFRHNHRLEFED 60
           MVL G TLSL+ PPLCTRS+ N GP+L FGLQA SL+TPVQ+KG  ACSF H+HRLEF+ 
Sbjct: 1   MVLRGATLSLQHPPLCTRSTFNGGPSLRFGLQARSLKTPVQIKGTHACSFSHSHRLEFKV 60

Query: 61  LGRLQMQCGSLRFTNFRISASSGDGSGSGSGSGGGDGGYGG---ENYGGGEGDGGKGGKD 120
           +GR QMQCGSLRFTNFRISASSGDGSG G GSGGG  GYGG   E+ GGGEGD GKGG +
Sbjct: 61  VGRRQMQCGSLRFTNFRISASSGDGSGDGFGSGGGSDGYGGYGREDSGGGEGDSGKGGDN 120

Query: 121 WSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALV 180
           WSFLSWYL+LLAKYPVLVKSVTSGILN LGD ICQLVFE++PSADLKRTFRFSLLGL LV
Sbjct: 121 WSFLSWYLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLVLV 180

Query: 181 GPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKL 240
           GPALH+WYLYLS+LVT+PGASGAFLRLLLDQF+FTPVFLGAFL GL+TLEGR SH+IPKL
Sbjct: 181 GPALHFWYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRRSHIIPKL 240

Query: 241 QQEWFSSVVANWKLWIPFQFFNFRFVPQQFQV 270
           QQEWFSSVVANWKLWIPFQF NFRFVPQQFQV
Sbjct: 241 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQV 272

[Close]

BLAST of MS000020 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-61
Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 77  RISASSGDGSGSGSGSGGGDGGYGGENYGGGEGDGGKGGKDWSFLSWYLALLAKYPVLVK 136
           R+SA  G  SG   G GG  GG GG   GGG+G  GK GK WS LSWY ALL+  PVL K
Sbjct: 72  RVSAVPGGNSGGSGGLGGSGGGGGGSGGGGGDGSDGK-GKKWSLLSWYQALLSNSPVLTK 131

Query: 137 SVTSGILNGLGDLICQLVFENSPSADLKRTFRFSLLGLALVGPALHYWYLYLSKLVTMPG 196
           +VT+ +LN +GDLICQL    + S D KRT  F+ LGL LVGP LH+WYLYLSK+VT  G
Sbjct: 132 AVTAALLNLVGDLICQLTINKTSSLDKKRTLTFTFLGLGLVGPTLHFWYLYLSKVVTASG 191

Query: 197 ASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQEWFSSVVANWKLWIPFQ 256
            SGA +RLLLDQF+F P+F+G FL+ +VTLEG+PS+VIPKLQQEW  +++ANW+LWIPFQ
Sbjct: 192 LSGAVIRLLLDQFVFAPIFVGVFLSAVVTLEGKPSNVIPKLQQEWTGAMIANWQLWIPFQ 251

Query: 257 FFNFRFVPQQFQV 270
           F NFRFVPQ +QV
Sbjct: 252 FLNFRFVPQNYQV 263

[Close]

BLAST of MS000020 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 85.9 bits (211), Expect = 5.5e-17
Identity = 47/155 (30.32%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 116 KDWSFLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLV-FENSPSADLKRTFRFSLLGL 175
           K  +FL WYL  L  +P + KS+T+ ++    DL  Q++  E + S DL RT R +  GL
Sbjct: 74  KQPAFLRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGL 133

Query: 176 ALVGPALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPS-HV 235
             +GP+ H W+ YLSK++        F ++++ Q +F PV    F +    L+G  S  +
Sbjct: 134 IFLGPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEI 193

Query: 236 IPKLQQEWFSSVVANWKLWIPFQFFNFRFVPQQFQ 269
           + +L+++   ++      W    F  F++VP   Q
Sbjct: 194 VARLKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQ 228

[Close]

BLAST of MS000020 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 85.5 bits (210), Expect = 7.1e-17
Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 0


Query: 120 FLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFE-NSPSADLKRTFRFSLLGLALVG 179
           F+ WYL ++  +PV+ KSVTS ++    DL  Q + + +S S DL RT R    GL ++G
Sbjct: 73  FVGWYLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLG 132

Query: 180 PALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEG-RPSHVIPKL 239
           P LHYW+ ++S+L         F ++ + Q I+ P+    F +   +L+G R S ++ +L
Sbjct: 133 PTLHYWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARL 192

Query: 240 QQEWFSSVVANWKLWIPFQFFNFRFVPQQFQ 269
           +++   ++      W    F  FRF P   Q
Sbjct: 193 KRDLLPALFNGVMYWPLCDFITFRFFPVHLQ 223

[Close]

BLAST of MS000020 vs. TAIR 10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 78.6 bits (192), Expect = 8.7e-15
Identity = 46/151 (30.46%), Postives = 74/151 (49.01%), Query Frame = 0


Query: 120 FLSWYLALLAKYPVLVKSVTSGILNGLGDLICQLVFENS-PSADLKRTFRFSLLGLALVG 179
           F+ WYL ++   PVL KSVTS ++    DL  Q + + S  S DL RT R    GL ++G
Sbjct: 82  FIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILG 141

Query: 180 PALHYWYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEG-RPSHVIPKL 239
           P LHYW+  +S L         F ++ + Q ++ P     F +    L+G   S ++ +L
Sbjct: 142 PTLHYWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARL 201

Query: 240 QQEWFSSVVANWKLWIPFQFFNFRFVPQQFQ 269
           +++   +++     W    F  F+F P   Q
Sbjct: 202 KRDLLPTMLNGVMYWPLCDFITFKFCPVYLQ 232

The following BLAST results are available for this feature:

BLAST of MS000020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152060.1	9.9e-146	98.88	protein sym-1 [Momordica charantia] >XP_022152061.1 protein sym-1 [Momordica cha...	[more]
XP_038903823.1	9.4e-120	83.82	protein sym-1 [Benincasa hispida]	[more]
XP_023539960.1	9.4e-120	83.09	protein sym-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022937869.1	1.2e-119	84.01	protein sym-1-like [Cucurbita moschata]	[more]
KAG6596182.1	2.7e-119	83.09	hypothetical protein SDJN03_09362, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS000020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42925	1.0e-20	37.01	Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2	[more]
Q07066	1.4e-20	36.36	Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2	[more]
Q2KIY1	3.0e-20	33.53	Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3	[more]
Q5TZ51	3.9e-20	40.28	Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1	[more]
Q54FR4	6.7e-20	35.62	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]

BLAST of MS000020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGH9	4.8e-146	98.88	protein sym-1 OS=Momordica charantia OX=3673 GN=LOC111019867 PE=3 SV=1	[more]
A0A6J1FCF7	5.9e-120	84.01	protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111444129 PE=3 SV=1	[more]
A0A1S3B718	1.7e-119	82.35	protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1	[more]
A0A5D3DPM1	1.7e-119	82.35	Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 ...	[more]
A0A6J1I1Z8	2.2e-119	82.72	protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111470168 PE=3 SV=1	[more]

BLAST of MS000020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19750.1	1.2e-61	62.69	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	5.5e-17	30.32	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G14860.1	7.1e-17	31.79	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G33905.1	8.7e-15	30.46	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 226..269 e-value: 1.1E-12 score: 47.9
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 113..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..110
None	No IPR available	PANTHER	PTHR11266:SF80	PEROXISOMAL MEMBRANE PROTEIN 2	coord: 113..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000020.1	MS000020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane