MELO3C035680 (gene) Melon (DHL92) v4

Overview
NameMELO3C035680
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr12: 15220436 .. 15228032 (+)
RNA-Seq ExpressionMELO3C035680
SyntenyMELO3C035680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTAGCATGGCAAGTTCATCGAGACTACCTAAGCACAATTGGACTAAAGAGGAAGAGGCAGGCCTCGTCGAGTGCCTCGTGGAGTTAGTCAATGCTGGTGGATGGAGGTCCGACAACGGGACGTTTCGACCCAGGTACCTAAATCAACTAGCGAGAATGATGGCCTTCAAGATCCCAGGTTCTAACGTCCATGCTTCAACGATCGATAGCCGAATAAAATTGTTAAAGAGAATGTTTCATGCAATTGCGGAGATGCGTGGCCCAACTTGCAGTGGATTTGGGTGGAATGATGAACAAAAATGCATCGTCGCAGAGAAAGAAGTCTTCGACAATTGGGTCAAGGTGTGTTACTAGTCATTTGTGTGATTACTGTAGTATATTTCAAAAACTGGACTAACAATTTATTATTGCACTTATATAGAGTCATCTGGCGGCGAAGGGCCTCCTTACTAAGTTGTTTCTCCACTATGACGAACTGTCGTATGTGTTTGGCAAAGATCGTGCAACGGGAGGCTGGGCCGAGAGTTTTGCAGACGTTGGGTCAAACAATCTTGCTGGGTACGAGCCATTTATCGCTAATGCTACGCCGGATACGAACTTCCAGCCTATGTACAGTCAAGAATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAAATGCTCGGGTAAGTGAAGGTAGGTATGTTTCGAGTGGGTCTAAGCGAAAACGTGGAGGACAGGCCGCAGACAGTGGGGACGTACTTCGCACTGCGATTGAGTATGGAAATGAACAACTGAACCACATTGCTGAATGACCTGTCCTACAACGTCAAGACGCAAGCCAAACACGTCAAGAGGTTGTCCGACAGTTGGAGGCCATCCCTGAGCTGACATTTATGGATAGGTGTCCCTTAATGCCTATACTTATGCGTAACGTCAATGACATGAAAGCTTTCCTTGAGGTTCCCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAACCGATGACTAGTTTGTTTGTTCTATTTGTATTGGTGGTTTTTTATACTTGGACTATATGTTCATTAATTTACTTATTTTGTCTTATTATCTAACAAAATTCTCTTTCTCTTCAAGCTTGGTTTGTATTTTCATTTCGCTTTTCAATGTAATGGTTTGATATTGTTGTATTATCGTATTAATGTACTGTTTTCGTTCAAGTTCTTTTTTACAATATTTCTAAATTGCGTACATGTGAAAATAATTTGTTTGAATAATTTAAATACGATTTACGAATTAATTTTGCACGACATAACATAAGAGAAGAAACAAAATTATTAAATGGGACTCAATAGAAACAAAATTATTAAATGGGACTCAATATAACTATTTTAGAAAATAAATATTTTGTTACTCACAGGTACGTAAAAAAAATATTTCAAAAGTATATACAGAAATATGTTTGGGTTATTCTAGTTACATAATTGAATATTGATCGTTTAAAAAAAATATTAAATTATAAATTTTGTATTCTTATATTAACATTCTTTATTTAAAAAAAATATCATAAATCCAATTAACGTAATATTTGCCCCAAACAAGTTTTATAATAATATTACACTCATAACTCTTCCTCCAAACACAATTTATAATAATACTACAATAATAATCCTTCCCCCAAACACATATTATAATAATACTACAATAATAATCCTTTCCCCAAACACATATTATTATAACACTACTATAATAATCCCTTTCCCAAACACATACTATCATAACACTACCTTTCATATTTCTTCCCCCAAACACATATTATAATAACACTACCAATAATAACACTTCCCCCCAAACACATATTATCATAACACTAGGATTATCATAATCCTAGGATTATCATAATCTTTTTCCCCCATAACTCTTTCCCTCCCCAAGGGTGGGTGTGTTTGGGCCTCGAGTATGGGGGGAAAAGGAAAAGAAATTTGGGCCAAACCTTGTTTGGCCTATATATTATGCCAAAAGGGGATTAGGAAAACCCTAATCCCCATATCCCCTATTTTATCCTACACTTCAGCTGTCGACTGCCTCTTTTAACCCTACTCTTTTCCGGCCGATTTCCTTCGATTTCTCTGTCTTTTCCGTTCCCTTTTCGTCGGATTATCTTCAATTATCTCCATTTTACCTATCTCTTCTCCCTTCCCCTTCAAGTTGATTTACATTTTGTTCGTATTTATACTATTTCACCGATCTGTTCGTGACCTCCGAAACGCCTTTGATCCTCTCATCCTCTCCCCGAAACGATCTGTTCGTGTTCCATTATTTTTCCCTAATCTCCCCGAAACGCCTCTCACCCTCTCTATTTTGTGTTTCGTTGATCGGTTGCGACGAACGTCCGTGACCTCCGAAAAGCTTCTCATCCTTTCTATTTTCCGTTTCGTTGATCGGTTGCCACGAAAGTGCGTGACCTCCGAAACGCTTCTCATCCTCTCTCCATTTTTTCATACCATTTCGTCCATCGAACAACCCTTGCCGCTCCCCACTCTTGCCGATCGTATAACCAGTTTACTGCACTTTTTTTGTTTAACCGAACGGGTATGTTGTCATTGATTCTACACTAAATCGAGGAAAGGAACTCGAGTAGGGGCATGGGAGCATGGCAGGGGTTATCGGTGTGCACTAAAGGTATGACGTGCCTATGATGAGGATTGTAGTGGTGGTTCTGATTTGGTCTTTTCATGTTTGTTCTTATTTTCGGTCGATTATGCATTCCTTTGTTCTTCATATTGCCAGTGATGAGTTCAATTATATATTACTGATTCTGTTCATTTTGTTTTAAATCTTCGTTTGTCAACTTCGTTAACCATCATCCGACTTTTGTTGTTGATGTTCATATGTGATCAATTGTGGATTTCTTTGTTGTTGATCTTTGTGATCAATTGTGTTCTTGATGTTCAAATGTGATCAATTGTGGAACATCCCTCTTTGTTCTTCATATTCGTTTCTGAACTTGTTTAACGATCATGAATCTCTGTTCTTGACATCTATATGTGATTGAACTTTCTTTTTCCTTCCTCTGTCATCATTTATGTTGGAACTCTGGATTTCTTTTACAACTGGTTAAATTTCATTTGTTCCATTCAATTTCAATTTTGCTGTCTATGTACTTGTGTTGAAAAAAATGTCTGCCTACTGTGTATATATATTTGGATGTTCTCACAGCATTACATGCCCCATTCTCTTCCCATTTTCTTATACTTGCAGTCCCCTTTGATATGTTCATAACATTTGTTTGCTCTAATTGCTTTTCATTACATTTGCCACTTTAGCCACTATTTTCACTACTTTACAATTGAATAATTTTTAATCTAACTTTTAAAACCACACTTGTTTGTTTTTTACAATTGCCACTTTTGCTATGTTCTTCAAATTTCCCCTACTTAATTTTTTTTTACAAAACAAATATGGTTGTTGTAGTTTGATTTCTTCCTATGGCCTTTTTTTGGTTTTGTAGTCTGTTTTCTCCCTATGGTTTTTTTCCCTTTGCGCACTGTGTTCTCACACTCCCGACGGTTTTATGAACATGTTGATCTCTATTTTATGTCTCTCGTTGGTTGCTTGTGTTTTACATGTGATGTTATCAAGTCCACCGCACTAAATTGTACCGCAAATGCGTTCTCTTGAACGTCTTTGATGGTATTTATTAACTCTGAGGCAACTTCCTTTCCCATACATTATGTACTAACACATTTATTTTTTGGTACGGTCCCATGGATTTGTAAGCTTTCGTTTCTTTTTAAGGTATGTTTCATATGCGTTTTTTCGTATATTTTTTACAATACATAATCTTTACGGCCACGCATATGTAATGACAATGTCGTTTGTTGTGTAAATCTTCAGGTTGTCGTACTTAAAGAATTCGTAATTGAGGTACAACGGCTTTAAACCTCATTCATTTATGAAGTTTATGTATATGTCGTGTACTTAATTATTTTTGTAATGAATTCTTTTCTTTCTTTATTATTCATTTCTGTTTCTTGTATCAAACGCTTCGCATTATATGTTATAAATCGTATTTTTCTTAGTATGTTAAGTGATAGTATTCTTTCCATTCTATATTTGCCACTGCCCGTATGTATGTTAGCTACTGTTTTGAAATTAAGAAAAGTTGCCATTGCCCGTATGTATGAATTTTTCTTAGTATGGATGAATTTGATATTCATTACATCAAACTTAATTAACATTATTATTTAAGAAAAGTTGATTGTATATGTAGATGAATAATAATAACACGGTGAGCTATAGATAATAAAATTGACATTATTATTTCAACAATATTATTGAGATATTGATGTATGTAATTTGGGTGGTATTAAGTAATGTTAAATGGAAATAGAATTCAAAATAATATTTTTTAACTAACTTTATTTTATGTAAGATGCAGTGGGTTAGAAAATTACTAGCTTCCCTAGTTAATTTACAAACATTTTACTTTACAAAAAATTAATTTAGAAACTCTTTCAATTACTTTAGAACAAATTAATGGCAAATATATTTTACAAACTCCTCCAAAAATTTTATAAACAAATTCCATTTATAAAGCAATTTTACAAACTCTCTCAATTAATTTATAAAATATTTGTATTTCTAAACATACTTTTTAAACTCCCATAATTAATGTAAGAAAAATGTATATTTATAAACATAATTTTACAAACTATTCCAATTAATTTGAAATTAAATAAATTTTCAAAACATATTTTCGCATTTGTGTCGCTTCTAAATGCGTTTCTAATGGACGAACATGTAATTAGTTTAAAAAAATGGGTTTCCAAATATACGTAATGAAGTTTGCACGAACGTATTTTCAAAAAAGTAGTACAAGTCAATTACTTAACTTGTAAACATATTAACTTAGTTTACCTTTGAAGATATTTCCAAAATTTCAAAACCTAGATTGGTAGTAGGTGATTACGTTAACAACATTCGAAATTAACACGTTCTTAGGATTATTTTCCAACAGGGTGTGAATCTATAATTTATAATGGATGAACATGAGTTGGCGTCTATTGTAAATGTACTCATAGCATCCTAACGACAGTTGTTACTAATGTTGGAGCTCTTGAAGAACGATACGAAGAGGATAACGCACATCCCGTATGAAACTAGGCATAGGATTAGACAGTTAGCTTACTTTCGCATGATTCATGGCTCAGACCTTGTCTGTCGCCAAAGTACGAGAATGGACCGAAGATGTTTCGCCATTTTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCAACATTCTTGCGCACGACGTGAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTTGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATCAGGAGCTTTTGAAAAAACCACAACCAGTGCCTAATGATTGCACAGATCAAAGATGGAGGTGGTTTGAGGTACACATTTATCTCGAACTACGTACTTCCAACACAACGACGTTAGTTCTTCTAAAAAATTTTGAGTTATGCGTTGTAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTGAACGTTCCAGTAAGTGATCGGGCTAGATATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGTGTGTGTGACACGAAAGGAGATTTCATTTACGTACTTGCCGGTTGGGAAGGATCAGCTGCAGACTCACGTATCCTCCGTGATGCCCTTTCAAGACCTAATGGGCTGAAGGTGCCCAAGGGTAAGTAACAACGGCATTGTACCTATGAATGCAATTTTGCAAGTAACAGCTGCGACATTTTAATCGTGCATTGTGGTCACAGGGTATTACTACCTGGTTGATGTCGGGTACCCAAATGCGGAGGGTTTCCTGGCACCATACAGAGGCCAACGCTATCACTTGCAAGAATGGCGTGGCCCTGAAAATGCACCTTCAACGTCGAAAAAGTTCTTCAATATGAAGCATTCGTCTGCTCGTAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATGAGCGATACTGTGGGGAAAGTCATACTACCATGTAGGAGTTCAATGTCGCACAATACTCGCATGTTGTCTCCTCCACAACCTTATCAATAGGGAGATGACAAACTTTGGTATAGAAGACAACATAGATGAGGTTGATTCCACCCACGCGACTACTGCCGCCGATGACATACATTACATACAGACGTCGAATGAGTGGAGTCAATGGAGGGACGACCTTGTAGAAGAAATGTTTACTGAATGGGAGTTTCGTAACCAATAGAAAAATTAAACGTTCCTCGTTCATTTTCATACTTAAGTAGTGATTGCAATAGGTTCTATGTTGTCATAGTTTTGGAATATGATTATTTTGAATGTATTGGTGACTGAAGTAACTTACTGCCAAACTGTTTTTCAGTAGGAGTTCACTGTACTATGAAACTAATCGTATGTATCTAATCTAATCATACGGAACTTAATGAAACTAATATGTTTGCGTTTGACTTCTAGCATGACAAGTTCATCGAGACTACCTAAACATACTTGGACTAAAGAGGAAGAGGCAAGCCTCGTGGAGTTGGTCAACGCTGGTGGGTGGAGGTCTGACAATGGAACCTTTCACCCCGGGTACTTAAATCAGCTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCATCGATAGCCGAATCAAATTGTTGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAAATTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAATGCATCGTCGCTGAGAAAGAAGTCTTTGACGATTGAGTAAAGGTGCATTAGTAGTCATTTGAACACTTGTACTATTATTTCAATACATGGACTAATAATTTATTATTGCACTTATACAGAGTCATCCGGCAGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCTTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCTGAGATTTTTGCAGACATTGGGTCAAACGATCCTGCTGGGTATGACGCATTTGTTGCTGATGCTGCGCCAGATACGAACTTCTCCCCAATGTACAGTCCGAGATTGAACATGTCACCTGATGATTTGATGGAAACCAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGTGGGTCTAGGCGGAAACATACAGGACATGCCACAGATAGTGGGGACATAGTTTGTACTGCCATCGTGTACGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGACGCAACCCAAACATGTCAAGAGATTGTTCGACAGTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTGCAGCATCATTTTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCATACTTGGAC

mRNA sequence

TTCTAGCATGGCAAGTTCATCGAGACTACCTAAGCACAATTGGACTAAAGAGGAAGAGGCAGGCCTCGTCGAGTGCCTCGTGGAGTTAGTCAATGCTGGTGGGTGGAGGTCTGACAATGGAACCTTTCACCCCGGGTACTTAAATCAGCTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCATCGATAGCCGAATCAAATTGTTGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAAATTGTAGTGGTTTTGGGTGGAATGATGAAAAAAAATGCATCGTCGCTGAGAAAGAAGTCTTTGACGATTGAGTAAAGAGTCATCCGGCAGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCTTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCTGAGATTTTTGCAGACATTGGGTCAAACGATCCTGCTGGGTATGACGCATTTGTTGCTGATGCTGCGCCAGATACGAACTTCTCCCCAATGTACAGTCCGAGATTGAACATGTCACCTGATGATTTGATGGAAACCAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGTGGGTCTAGGCGGAAACATACAGGACATGCCACAGATAGTGGGGACATAGTTTGTACTGCCATCGTGTACGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGACGCAACCCAAACATGTCAAGAGATTGTTCGACAGTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTGCAGCATCATTTTTCAAGAAAACCGATGACTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCATACTTGGAC

Coding sequence (CDS)

ATGTACAGTCCGAGATTGAACATGTCACCTGATGATTTGATGGAAACCAGAACCGCTAGGGTCAGTGAACGTAGGAATGTTTCAAGTGGGTCTAGGCGGAAACATACAGGACATGCCACAGATAGTGGGGACATAGTTTGTACTGCCATCGTGTACGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGACGCAACCCAAACATGTCAAGAGATTGTTCGACAGTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGAAGTTCCCGACAATATGAAGTACCCGTACTGCAGCATCATTTTTCAAGAAAACCGATGA

Protein sequence

MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRIAEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYPYCSIIFQENR
Homology
[Close]
BLAST of MELO3C035680 vs. NCBI nr
Match: KAA0054345.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK12382.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 264.2 bits (674), Expect = 5.8e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI
Sbjct: 164 MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 223

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP
Sbjct: 224 AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 283

Query: 121 YCSIIFQENR 131
           YCSIIFQENR
Sbjct: 284 YCSIIFQENR 293

[Close]
BLAST of MELO3C035680 vs. NCBI nr
Match: KAA0065892.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 121/130 (93.08%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSP LNMSPDDLMETRTARVSERRNVSSGS+RK  GHATDSGDIV TAI YGNEQLHRI
Sbjct: 173 MYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRI 232

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDATQT QEIVRQLE IPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP
Sbjct: 233 AEWPILQRQDATQTRQEIVRQLEVIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 292

Query: 121 YCSIIFQENR 131
           YCSII QENR
Sbjct: 293 YCSIILQENR 302

[Close]
BLAST of MELO3C035680 vs. NCBI nr
Match: KAA0048280.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 7.6e-59
Identity = 118/130 (90.77%), Postives = 123/130 (94.62%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSP LNMSPDDLMETRTARVSERRNVSSGS+RK +GHATDSGDIV TA+ YGNEQLHRI
Sbjct: 144 MYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRSGHATDSGDIVRTAMEYGNEQLHRI 203

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDAT+T QEIVRQLE IPELTLMDRCRLMRI+MRNVDDMKAFLEVPDNMKYP
Sbjct: 204 AEWPILQRQDATETRQEIVRQLEVIPELTLMDRCRLMRIIMRNVDDMKAFLEVPDNMKYP 263

Query: 121 YCSIIFQENR 131
           YCSII QENR
Sbjct: 264 YCSIILQENR 273

[Close]
BLAST of MELO3C035680 vs. NCBI nr
Match: KAA0065737.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 236.9 bits (603), Expect = 9.9e-59
Identity = 120/130 (92.31%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSP LNMSPDDLMETRTARVSERRNVSS S+RK  GHATDSGDIV TAI YGNEQLHRI
Sbjct: 169 MYSPGLNMSPDDLMETRTARVSERRNVSSESKRKRPGHATDSGDIVRTAIEYGNEQLHRI 228

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDATQT Q+IVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP
Sbjct: 229 AEWPILQRQDATQTRQDIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 288

Query: 121 YCSIIFQENR 131
           YCSII QENR
Sbjct: 289 YCSIILQENR 298

[Close]
BLAST of MELO3C035680 vs. NCBI nr
Match: KAA0046363.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58
Identity = 120/130 (92.31%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSP LNMSPDDLMETRTARVSERRNVSS S+RK  GHATDSGDIV TAI YGNEQLHRI
Sbjct: 144 MYSPGLNMSPDDLMETRTARVSERRNVSSRSKRKRIGHATDSGDIVRTAIEYGNEQLHRI 203

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDATQT QEIVRQLEAIPELTLMDRCRLMRILMRNVDD+KAFLEVPDNMKYP
Sbjct: 204 AEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDIKAFLEVPDNMKYP 263

Query: 121 YCSIIFQENR 131
           YCSII QENR
Sbjct: 264 YCSIILQENR 273

[Close]
BLAST of MELO3C035680 vs. ExPASy TrEMBL
Match: A0A5A7UKY6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001640 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.8e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI
Sbjct: 164 MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 223

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP
Sbjct: 224 AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 283

Query: 121 YCSIIFQENR 131
           YCSIIFQENR
Sbjct: 284 YCSIIFQENR 293

[Close]
BLAST of MELO3C035680 vs. ExPASy TrEMBL
Match: A0A5A7VC47 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00690 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.4e-60
Identity = 121/130 (93.08%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSP LNMSPDDLMETRTARVSERRNVSSGS+RK  GHATDSGDIV TAI YGNEQLHRI
Sbjct: 173 MYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRI 232

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDATQT QEIVRQLE IPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP
Sbjct: 233 AEWPILQRQDATQTRQEIVRQLEVIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 292

Query: 121 YCSIIFQENR 131
           YCSII QENR
Sbjct: 293 YCSIILQENR 302

[Close]
BLAST of MELO3C035680 vs. ExPASy TrEMBL
Match: A0A5A7TYQ6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G002060 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.7e-59
Identity = 118/130 (90.77%), Postives = 123/130 (94.62%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSP LNMSPDDLMETRTARVSERRNVSSGS+RK +GHATDSGDIV TA+ YGNEQLHRI
Sbjct: 144 MYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRSGHATDSGDIVRTAMEYGNEQLHRI 203

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDAT+T QEIVRQLE IPELTLMDRCRLMRI+MRNVDDMKAFLEVPDNMKYP
Sbjct: 204 AEWPILQRQDATETRQEIVRQLEVIPELTLMDRCRLMRIIMRNVDDMKAFLEVPDNMKYP 263

Query: 121 YCSIIFQENR 131
           YCSII QENR
Sbjct: 264 YCSIILQENR 273

[Close]
BLAST of MELO3C035680 vs. ExPASy TrEMBL
Match: A0A5A7VF53 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00250 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.8e-59
Identity = 120/130 (92.31%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYSP LNMSPDDLMETRTARVSERRNVSS S+RK  GHATDSGDIV TAI YGNEQLHRI
Sbjct: 169 MYSPGLNMSPDDLMETRTARVSERRNVSSESKRKRPGHATDSGDIVRTAIEYGNEQLHRI 228

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDATQT Q+IVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP
Sbjct: 229 AEWPILQRQDATQTRQDIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 288

Query: 121 YCSIIFQENR 131
           YCSII QENR
Sbjct: 289 YCSIILQENR 298

[Close]
BLAST of MELO3C035680 vs. ExPASy TrEMBL
Match: A0A5A7UJB1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005120 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.3e-59
Identity = 120/130 (92.31%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 1   MYSPRLNMSPDDLMETRTARVSERRNVSSGSRRKHTGHATDSGDIVCTAIVYGNEQLHRI 60
           MYS  LNMSPDDLMETRTARVSERRNVSSGS+RK  GHATDSGDIV TAI YGNEQLHRI
Sbjct: 1   MYSRGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRI 60

Query: 61  AEWPILQRQDATQTCQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120
           AEWPILQRQDATQT QEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP
Sbjct: 61  AEWPILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYP 120

Query: 121 YCSIIFQENR 131
           YC+II QENR
Sbjct: 121 YCNIILQENR 130

The following BLAST results are available for this feature:
BLAST of MELO3C035680 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035680 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0054345.15.8e-67100.00retrotransposon protein [Cucumis melo var. makuwa] >TYK12382.1 retrotransposon p... [more]
KAA0065892.11.5e-5993.08retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0048280.17.6e-5990.77retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0065737.19.9e-5992.31retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0046363.11.3e-5892.31retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C035680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UKY62.8e-67100.00Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VC477.4e-6093.08Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TYQ63.7e-5990.77Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VF534.8e-5992.31Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UJB16.3e-5992.31Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C035680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..40

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035680.1MELO3C035680.1mRNA