MELO3C035609 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035609
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	L10-interacting MYB domain-containing protein-like
Location	chr12: 13243065 .. 13243457 (-)
RNA-Seq Expression	MELO3C035609
Synteny	MELO3C035609

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTGTCAGCAATACAAACTTTGGTGTTCAAGAAAATGATAAAGAAAAAGGTAAAAAATAAGTTCAAAGAAAGAAAAGCAAATTTGCCAAAAAACAATTCTACATTCATAGATGTATATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAGGTCTTTTGATTGTAAATCTAGTCAAATTGATGAGAGCCAAACATCAAGCAAAAAAGATGATTTCGATGAAGAGTTGATGGAATGTTTCAACATTTTAAATACAATGGAGGATGTTGATGGAGAAGCTTATTCCAAAATACTTAAACTCTTGCACGGAGATCTTGCTTGGAGAAAACTATTTTTTCACTTGTCCAATTCAAGGAAGAGAGATTTCATAAATAGTCTCTAG

mRNA sequence

ATGATGTTGTCAGCAATACAAACTTTGGTGTTCAAGAAAATGATAAAGAAAAAGGTAAAAAATAAGTTCAAAGAAAGAAAAGCAAATTTGCCAAAAAACAATTCTACATTCATAGATGTATATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAGGTCTTTTGATTGTAAATCTAGTCAAATTGATGAGAGCCAAACATCAAGCAAAAAAGATGATTTCGATGAAGAGTTGATGGAATGTTTCAACATTTTAAATACAATGGAGGATGTTGATGGAGAAGCTTATTCCAAAATACTTAAACTCTTGCACGGAGATCTTGCTTGGAGAAAACTATTTTTTCACTTGTCCAATTCAAGGAAGAGAGATTTCATAAATAGTCTCTAG

Coding sequence (CDS)

ATGATGTTGTCAGCAATACAAACTTTGGTGTTCAAGAAAATGATAAAGAAAAAGGTAAAAAATAAGTTCAAAGAAAGAAAAGCAAATTTGCCAAAAAACAATTCTACATTCATAGATGTATATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAGGTCTTTTGATTGTAAATCTAGTCAAATTGATGAGAGCCAAACATCAAGCAAAAAAGATGATTTCGATGAAGAGTTGATGGAATGTTTCAACATTTTAAATACAATGGAGGATGTTGATGGAGAAGCTTATTCCAAAATACTTAAACTCTTGCACGGAGATCTTGCTTGGAGAAAACTATTTTTTCACTTGTCCAATTCAAGGAAGAGAGATTTCATAAATAGTCTCTAG

Protein sequence

MMLSAIQTLVFKKMIKKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDDFDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL

Homology

[Close]

BLAST of MELO3C035609 vs. NCBI nr
Match: KAA0068177.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41
Identity = 96/130 (73.85%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 1   MMLSAIQTLVFKKMIKKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCK 60
           MML A QTLV K++IK+K KN FKER         +F+DVYAENAKRKNDI+EKRSF C 
Sbjct: 3   MMLQATQTLVLKRIIKEKAKNDFKERN-EFGSFFPSFLDVYAENAKRKNDIIEKRSFGCT 62

Query: 61  SSQIDESQTSSKKDDFDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSN 120
           SSQ+DESQTS+KKDD  EELMEC +ILNTMEDVDGEAYSKILKLLHG+LAWRKLF  + +
Sbjct: 63  SSQVDESQTSNKKDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGNLAWRKLFLRMPD 122

Query: 121 SRKRDFINSL 131
           SRKRDFINSL
Sbjct: 123 SRKRDFINSL 131

[Close]

BLAST of MELO3C035609 vs. NCBI nr
Match: TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           K K K +F+ +K       S+F+DVYAENAKRKNDILEKRSF C SSQ+DESQTS+KKDD
Sbjct: 89  KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  FDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
             EELMEC +ILNTMEDVDGEAYSKILKLLHGDLAWRKLF  + +SRKRDFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of MELO3C035609 vs. NCBI nr
Match: KAA0061221.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           K K K +F+ +K       S+F+DVYAENAKRKNDILEKRSF C SSQ+DESQTS+KKDD
Sbjct: 89  KGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  FDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
             EELMEC +ILNTMEDVDGEAYSKILKLLHGDLAWRKLF  + +SRKRDFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of MELO3C035609 vs. NCBI nr
Match: TYK21097.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           K K K +F+ +K       S+F+DVYAENAKRKNDILEKRSF C SSQ+DESQTS+KKDD
Sbjct: 161 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 220

Query: 76  FDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
             EELMEC +ILNTMEDVDGEAYSKILKLLHGDLAWRKLF  + +SRKRDFINSL
Sbjct: 221 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 275

[Close]

BLAST of MELO3C035609 vs. NCBI nr
Match: TYK06268.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           K K K +F+ +K       S+F+DVYAENAKRKNDILEKRSF C SSQ+DESQTS+KKDD
Sbjct: 89  KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  FDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
             EELMEC +ILNTMEDVDGEAYSKILKLLHGDLAWRKLF  + +SRKRDFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of MELO3C035609 vs. ExPASy TrEMBL
Match: A0A5A7VLQ4 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001460 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 7.0e-42
Identity = 96/130 (73.85%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 1   MMLSAIQTLVFKKMIKKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCK 60
           MML A QTLV K++IK+K KN FKER         +F+DVYAENAKRKNDI+EKRSF C 
Sbjct: 3   MMLQATQTLVLKRIIKEKAKNDFKERN-EFGSFFPSFLDVYAENAKRKNDIIEKRSFGCT 62

Query: 61  SSQIDESQTSSKKDDFDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSN 120
           SSQ+DESQTS+KKDD  EELMEC +ILNTMEDVDGEAYSKILKLLHG+LAWRKLF  + +
Sbjct: 63  SSQVDESQTSNKKDDLHEELMECLDILNTMEDVDGEAYSKILKLLHGNLAWRKLFLRMPD 122

Query: 121 SRKRDFINSL 131
           SRKRDFINSL
Sbjct: 123 SRKRDFINSL 131

[Close]

BLAST of MELO3C035609 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.7e-38
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           K K K +F+ +K       S+F+DVYAENAKRKNDILEKRSF C SSQ+DESQTS+KKDD
Sbjct: 89  KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  FDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
             EELMEC +ILNTMEDVDGEAYSKILKLLHGDLAWRKLF  + +SRKRDFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of MELO3C035609 vs. ExPASy TrEMBL
Match: A0A5D3DBS2 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00630 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.7e-38
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           K K K +F+ +K       S+F+DVYAENAKRKNDILEKRSF C SSQ+DESQTS+KKDD
Sbjct: 161 KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 220

Query: 76  FDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
             EELMEC +ILNTMEDVDGEAYSKILKLLHGDLAWRKLF  + +SRKRDFINSL
Sbjct: 221 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 275

[Close]

BLAST of MELO3C035609 vs. ExPASy TrEMBL
Match: A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.7e-38
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           K K K +F+ +K       S+F+DVYAENAKRKNDILEKRSF C SSQ+DESQTS+KKDD
Sbjct: 89  KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  FDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
             EELMEC +ILNTMEDVDGEAYSKILKLLHGDLAWRKLF  + +SRKRDFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

[Close]

BLAST of MELO3C035609 vs. ExPASy TrEMBL
Match: A0A5A7V5Z1 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00520 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.7e-38
Identity = 86/115 (74.78%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 16  KKKVKNKFKERKANLPKNNSTFIDVYAENAKRKNDILEKRSFDCKSSQIDESQTSSKKDD 75
           K K K +F+ +K       S+F+DVYAENAKRKNDILEKRSF C SSQ+DESQTS+KKDD
Sbjct: 89  KGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVDESQTSNKKDD 148

Query: 76  FDEELMECFNILNTMEDVDGEAYSKILKLLHGDLAWRKLFFHLSNSRKRDFINSL 131
             EELMEC +ILNTMEDVDGEAYSKILKLLHGDLAWRKLF  + +SRKRDFINSL
Sbjct: 149 LHEELMECLDILNTMEDVDGEAYSKILKLLHGDLAWRKLFLRMPDSRKRDFINSL 203

The following BLAST results are available for this feature:

BLAST of MELO3C035609 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035609 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0068177.1	1.4e-41	73.85	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYJ96795.1	9.7e-38	74.78	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T...	[more]
KAA0061221.1	9.7e-38	74.78	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYK21097.1	9.7e-38	74.78	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYK06268.1	9.7e-38	74.78	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C035609 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VLQ4	7.0e-42	73.85	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3BNQ5	4.7e-38	74.78	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3DBS2	4.7e-38	74.78	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C535	4.7e-38	74.78	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7V5Z1	4.7e-38	74.78	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of MELO3C035609 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035609.1	MELO3C035609.1	mRNA