MELO3C035585 (gene) Melon (DHL92) v4

Overview
NameMELO3C035585
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 11235969 .. 11237135 (+)
RNA-Seq ExpressionMELO3C035585
SyntenyMELO3C035585
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTGAAGGAGTAGTGCTACACTCGAGTGTACCAGTTCAGGCAGTGATCGGGAACTTTGGTAAAGGAATTTATCTTCCTTTGGATCTTCTCAGGTTTTTTCCCTTTCTCCTTTCTCCTTTCTCGCTGTGAAATTTGATGGTGTTATGCCCTATGCTGTTGTTGAGCCAAACTGTTAGTACATGCAGATTTTGAGTTTCATAATCTGAAGTGTATGATCCCTTAATGTTATGAAAATATATATTATTGTGTGATAAATATAGTATTTAATGTTATGAACTCATCTCATTTTTAAAAAAATTAAAATATGTATGATATAATATATTATAAATTATATGATGCTGTGAAATAATAAAACATGATCATCAATAATAGTTGATATCCGATCTAATATTTAGTTGGTAACTATAGGTATTTTTGTAGTTTATTAATATATTACCAAATACATTTTGAACCATGGATTAAATTGGGATGTAGATTCTTAATCTGTTACCAAATACACACTGATTCATTGAATTTTTGTTTTCTTCCCAATTTCCCAACACACCCTTATCTTCTGTGCCTTCTTTTTCCATCACCCGATTCGACGGATGATTGCACTAATATGAGTAGCTTTGAAAATAGGGAATGAGTGATGATTAGATTTGGCATTTGAGTTAAAATCTTACACCATCGTTTTGTCTGCTTTGCAATAATTAATCTATGTATTAGGCTTATTCATCACTAAAGAAGAGACATTATTGTGCAATCATTCTGTTGAAGAAGAGATGTCTCTTTTTTCTCTTCGTTTAGGATTGTGAAAGATGATACAGCAAGAAATTTTTAATACAGATTTTTATTTATAAATTATAAAATTAAAAAAAAAATGTTGATTGATTCTACCAACTGAGGAGTTTGTCTTCTTCCAAAATTGCATTGTCCTGAAATGTTTGCAGTAGATAATTGATCAACTACATAGCTACTAATGAACTTTTTGTAATAACCGGTGCAATTCTGATCTTCTTATTTCTCAACGACAGGGCTATTAATGAACCTTTAGCTTTTCCGGCAATGGTTGCACCAATGGGATTAGCCTCTGCAGTGGGTCTTCTTGGATGTGTTTATCAAGCTCTAAAACCTTCACCCCCAAAGATGTGGATCAGAAAATGGCCCTCCAGTGACTTCACCTAG

mRNA sequence

AGTGAAGGAGTAGTGCTACACTCGAGTGTACCAGTTCAGGCAGTGATCGGGAACTTTGGTAAAGGAATTTATCTTCCTTTGGATCTTCTCAGGGCTATTAATGAACCTTTAGCTTTTCCGGCAATGGTTGCACCAATGGGATTAGCCTCTGCAGTGGGTCTTCTTGGATGTGTTTATCAAGCTCTAAAACCTTCACCCCCAAAGATGTGGATCAGAAAATGGCCCTCCAGTGACTTCACCTAG

Coding sequence (CDS)

AGTGAAGGAGTAGTGCTACACTCGAGTGTACCAGTTCAGGCAGTGATCGGGAACTTTGGTAAAGGAATTTATCTTCCTTTGGATCTTCTCAGGGCTATTAATGAACCTTTAGCTTTTCCGGCAATGGTTGCACCAATGGGATTAGCCTCTGCAGTGGGTCTTCTTGGATGTGTTTATCAAGCTCTAAAACCTTCACCCCCAAAGATGTGGATCAGAAAATGGCCCTCCAGTGACTTCACCTAG

Protein sequence

SEGVVLHSSVPVQAVIGNFGKGIYLPLDLLRAINEPLAFPAMVAPMGLASAVGLLGCVYQALKPSPPKMWIRKWPSSDFT
Homology
[Close]
BLAST of MELO3C035585 vs. NCBI nr
Match: KAA0035406.1 (uncharacterized protein E6C27_scaffold285G00210 [Cucumis melo var. makuwa] >TYK25745.1 uncharacterized protein E5676_scaffold862G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 5.6e-28
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 3  GVVLHSSVPVQAVIGNFGKGIYLPLDLLRAINEPLAFPAMVAPMGLASAVGLLGCVYQAL 62
          GVVLHSSVPVQAVIGNFGKGIYLPLDLLRAINEPLAFPAMVAPMGLASAVGLLGCVYQAL
Sbjct: 15 GVVLHSSVPVQAVIGNFGKGIYLPLDLLRAINEPLAFPAMVAPMGLASAVGLLGCVYQAL 74

Query: 63 KPSPPKMWI 72
          KPSPPK+ +
Sbjct: 75 KPSPPKILV 83

[Close]
BLAST of MELO3C035585 vs. ExPASy TrEMBL
Match: A0A5A7SZM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00410 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-28
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0 

Query: 3  GVVLHSSVPVQAVIGNFGKGIYLPLDLLRAINEPLAFPAMVAPMGLASAVGLLGCVYQAL 62
          GVVLHSSVPVQAVIGNFGKGIYLPLDLLRAINEPLAFPAMVAPMGLASAVGLLGCVYQAL
Sbjct: 15 GVVLHSSVPVQAVIGNFGKGIYLPLDLLRAINEPLAFPAMVAPMGLASAVGLLGCVYQAL 74

Query: 63 KPSPPKMWI 72
          KPSPPK+ +
Sbjct: 75 KPSPPKILV 83

The following BLAST results are available for this feature:
BLAST of MELO3C035585 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035585 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035406.15.6e-2895.65uncharacterized protein E6C27_scaffold285G00210 [Cucumis melo var. makuwa] >TYK2... [more]
BLAST of MELO3C035585 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SZM72.7e-2895.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C035585 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035585.1MELO3C035585.1mRNA