MELO3C035584 (gene) Melon (DHL92) v4

Overview
NameMELO3C035584
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 11250112 .. 11250860 (+)
RNA-Seq ExpressionMELO3C035584
SyntenyMELO3C035584
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTCCTCGGGATCACCACCTTTTTATGATTGTGTGGTCTGACGGGATCACCACTCTTATGAGATGTTATGTATATGAGTGGTCCGACGGGGTCACTTACAGCCCGATTATCTTAAGTGTTCATTTGGGTTCACTAAAGACTAGTTTGTCTTAGGTGTTCTTTCGAGTTCACTGAAGACCAGCTTTGTCCTAGGTGTTCCCTTTGGGTTCACCGAAGACCAGAGATGTTCCTATTGGATCATTAGATTGCATGTAGATGGGAACGCGCCAGTTTAGGGGTACTTCTTTACAGGACTCTAATAGGAAGTTAACGGACACCCAACGGAACTAACGGAACCAGTAGTAGATTCCTTACTGAGTATATGTTTGTACTCACTCTTTCTATGTTTAATTTTTCAGGTAAAGGTAGAGATAGAGGTAGAGGAAAGCTGACGAATGACAATAAGTGACTGTGACTTGCCATAGGGAAACTTTTTGCTTCCACTTTTACTTTACAATTATGATTTCAACATAATAGAGCTAGGATTTTATTTTTAGAGATTTATTTCTACATACTCTTATTTATTTAATGAGCATTTTAGGTTTTTAGTTGAAGCTAGTGTTATTTTCCATATTGTTCGGAGAGTTTTTATTTTCTTTTAAATAGTAATGACCCCATCTTAATATAAAGAGTTGGGTCGTTACATTAGTTGTCTCAAAAATTAATTACCTTGAATCTCTACTAAAAAAAATCGATTAAAACTC

mRNA sequence

ATGGGTTTTCCTCGGGATCACCACCTTTTTATGATTGTGTGGTCTGACGGGATCACCACTCTTATGAGATGTTATGTATATGAGTGGTCCGACGGGGTCACTTACAGCCCGATTATCTTAAGTGTTCATTTGGGTTCACTAAAGACTAGTAAAGGTAGAGATAGAGGTAGAGGAAAGCTGACGAATGACAATAAGTGACTGTGACTTGCCATAGGGAAACTTTTTGCTTCCACTTTTACTTTACAATTATGATTTCAACATAATAGAGCTAGGATTTTATTTTTAGAGATTTATTTCTACATACTCTTATTTATTTAATGAGCATTTTAGGTTTTTAGTTGAAGCTAGTGTTATTTTCCATATTGTTCGGAGAGTTTTTATTTTCTTTTAAATAGTAATGACCCCATCTTAATATAAAGAGTTGGGTCGTTACATTAGTTGTCTCAAAAATTAATTACCTTGAATCTCTACTAAAAAAAATCGATTAAAACTC

Coding sequence (CDS)

ATGGGTTTTCCTCGGGATCACCACCTTTTTATGATTGTGTGGTCTGACGGGATCACCACTCTTATGAGATGTTATGTATATGAGTGGTCCGACGGGGTCACTTACAGCCCGATTATCTTAAGTGTTCATTTGGGTTCACTAAAGACTAGTAAAGGTAGAGATAGAGGTAGAGGAAAGCTGACGAATGACAATAAGTGA

Protein sequence

MGFPRDHHLFMIVWSDGITTLMRCYVYEWSDGVTYSPIILSVHLGSLKTSKGRDRGRGKLTNDNK
Homology
[Close]
BLAST of MELO3C035584 vs. NCBI nr
Match: KAA0063199.1 (hypothetical protein E6C27_scaffold205G00060 [Cucumis melo var. makuwa] >TYK23494.1 hypothetical protein E5676_scaffold2774G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 6.8e-08
Identity = 39/85 (45.88%), Postives = 45/85 (52.94%), Query Frame = 0 

Query: 11 MIVWSDGITTLMRCYVYEWSDGVTYSPIILSVHLGSLKTS-------------------- 66
          M V SDGIT+ MRCYVYEWSDGVTYS I+LSV  GSLKTS                    
Sbjct: 1  MAVLSDGITSFMRCYVYEWSDGVTYSLIVLSVPSGSLKTSFILCVPLGSLKTRCVPMESL 60

[Close]
BLAST of MELO3C035584 vs. NCBI nr
Match: KAA0064148.1 (hypothetical protein E6C27_scaffold548G00710 [Cucumis melo var. makuwa] >TYK16013.1 hypothetical protein E5676_scaffold3068G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 9.2e-05
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0 

Query: 20  TLMRCYVYEWSDGVTYSPIILSVHLGSLKTSKGRDRGRGKLTNDNK 66
           ++MRCYVYEWS+ VTYSP++LSV  G     KG  RGR KL ND K
Sbjct: 133 SIMRCYVYEWSNRVTYSPVVLSVPSG-----KGIGRGRRKLANDKK 173

[Close]
BLAST of MELO3C035584 vs. ExPASy TrEMBL
Match: A0A5A7VC74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2774G00090 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.3e-08
Identity = 39/85 (45.88%), Postives = 45/85 (52.94%), Query Frame = 0 

Query: 11 MIVWSDGITTLMRCYVYEWSDGVTYSPIILSVHLGSLKTS-------------------- 66
          M V SDGIT+ MRCYVYEWSDGVTYS I+LSV  GSLKTS                    
Sbjct: 1  MAVLSDGITSFMRCYVYEWSDGVTYSLIVLSVPSGSLKTSFILCVPLGSLKTRCVPMESL 60

[Close]
BLAST of MELO3C035584 vs. ExPASy TrEMBL
Match: A0A5A7V952 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3068G00090 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.4e-05
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0 

Query: 20  TLMRCYVYEWSDGVTYSPIILSVHLGSLKTSKGRDRGRGKLTNDNK 66
           ++MRCYVYEWS+ VTYSP++LSV  G     KG  RGR KL ND K
Sbjct: 133 SIMRCYVYEWSNRVTYSPVVLSVPSG-----KGIGRGRRKLANDKK 173

The following BLAST results are available for this feature:
BLAST of MELO3C035584 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035584 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063199.16.8e-0845.88hypothetical protein E6C27_scaffold205G00060 [Cucumis melo var. makuwa] >TYK2349... [more]
KAA0064148.19.2e-0560.87hypothetical protein E6C27_scaffold548G00710 [Cucumis melo var. makuwa] >TYK1601... [more]
BLAST of MELO3C035584 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VC743.3e-0845.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V9524.4e-0560.87Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C035584 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035584.1MELO3C035584.1mRNA