
MELO3C035561 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTATAGAAAGGAGACAAGCTGAAGCTGCTCGCATCAGGGAGAAATACCTAGATAGAATTCCCGTAAGAATGTTAAACTTTCATTACAGTGTTTGGCACAGAGTTCACTCATATTCTTGTCTATTAATGTGATTTATCTATGCAGGATATTGTGGAGAAAGCTGAAAGGAGCAACATTTCTGACATAGATAAGAGAAGTAAGTAACCTTGTGACTTGATTTTATATAAATTAGTTAAAACTAGACTTCTTAACCAAAATGAGCTGCAAATGAAGCCAGCATGAGAGACCCTGCATTGAATTAAAACTCCAAAAGTTGGTTTATATGAATAGGTGCTCGTTGTTTTTTCATTTCCATAAAAATTACGAATCACGACTGAAGATGGTAGGCTCTTGATTGTTAGATATTAAGTATAGTGTGGTAGCCGTTTATTTTTTGTTCTAGTGTTAGGTTTCTTAGACAAAAATTTAGATTGTAATATCAGTGAAAAAGTTCTATATCAATAGTCTCTGTACTATCTTGGCTTCAGAGGCTTATGAGGTGATAATTCTTCCACTTTTGAGCTAATGCAAGTTACATAAGTGAATTTTTTTTACCATTGTTGGAGGTTTTGATATTGAATTGTTGATCTGTACAATTCTTTGCTCAAGCTGGATTTCCCTACCGTGCTCTAAGGAACCCTTCTGATCATTTTCTTAGATGTATCAATTCAGACTTTGATAAAGTCAAGGCCACTCTCAAAGGTTCTATGAAATTAAAGGTATAATTGTTTTTCCAGTCAAGATTCTATAGGTTAAATATGATAGAAAATTGTGTTTTTCATAACTAAAGTTGCTTAGATAAACAAGGACAACAAAAAGTTAAGGCTAAATCATATATTTTTTTGTCTCTAAACTTGGGTGCTAATTTAGTATATAGGAAGATTTAATCATTGTCTCAAGCCTGTGTGTCATTTATGTGTCTAACCTGCATCCCTTCTTTCATGATGATTTTGCACCGATAATGGCTTCTAGTTTGACTGAATTGACGGTGAGGGACCCCCTCCAGAGAATCTTATGGATTCCCTTATGAGGTCAGAGTCTATTCTTTATCAAAGGTACTAGAATTTGTTCTTATAAAGTTTAACTATTTTATATACGAATGATAGTTGGAGTACATAGAAGTTAATAAGCACTTTACGACCTTTATGTATAATATTATGGAAATAACAGGATTTTAGTGGAGGAAACTGATAGTTTCCAATCTAACAAATTATATTCGTTTGAAATGCGTCTGTGGTGCTTTTGTGGGTGGGAATTCTGAAACAAAATTCTTGCCTAATTCCTTTGTTTAGTGTTTTCAAGATGGAGTTATCCTTAGAGAAGTAAGTGTTGTCTTTTCTCAGTACAAAACTTGATCATTTAGTTTGCGTGGTATATATATTGGTCCAGGAATCAAGCTACTATGTGGTTTACATGGACTAGTTAAGTGGCTTCCATGTAACAACATATGATCATTAGACATTTTTAGTAACCTCATTGGTGTAAATGCACTTCATATTTTTTTGATTACTATCTTACTACTCTTAGTAGTTTTCACTAATGAATATTAATATTCTCAATTTTCTTCTCCATTTAGGAAATTGGGCTACTCAATATTCTAGTTGTAGTAGTAGTTAGTAAAATTTGCAAATGTGGCTTTTAGAATCTTTTATTTTACTGACCATTGATATTTTTCTGTTCATACTGATGCATGTCTTATTAATTGAAGTATTCCATAGCTGAGCAATAAGTTCCATTCATACTAAATTAAGGAAGTTGGCTATTTTCACTTTGGTCTATGCTTAAAATTTTAAGCAGTTTTAGTACTTATTCATTTTCTATTGAACAATCTTCTAGGGCATATGATCAGCTAGAAATGACATCTTTCTTGAATTTTGAACTGTTTTTTTTTTTTTACCGAATGTGTTGACAGGTATGTTAGAATGAAGGAAAAGCTAGGAAAATTCTGGATAAGGCAGTTGATCATGGTGAGTTATCCAAACCACTTATTTAGGTACTCTTTTTTCTCTATTTGAAACATTTAAAATTTTCTCTCATAAGCGTCGTTTTCATGAGGTCAAATTTATACCTTTTTGCCTCCATGATTCATCCAGGCCTTGATACATTTTGAGGCAATTCAATCTACGACAAAGAGAATCAATTACTTAGATTCATTGGTTGAAAAGGTCATAGTGCCAAACACAGAGAAAGCAACGGTCGTGAGTGCTTCAATAAGGCATGAGTTATCGAGCATTTTCTTCGAGGTACGAATAAAGTTTTCATGTTTGCTGGGGAAAAACTTTTGAGGGTTGAAGGCGTAATTACTAATTGCAAATTACAAGTGAAGAATTAATTCTAGTATACAACTAACTGTTGATTTATGTTGGTGGGTCTAATATTGAGACAGTTTGATATAAGATTATCTAGTTATAAAGGTCTCTTGTTTTTCCACCTTACTCCGGATCTCACTGTCAATATTTCCATAGCATGTATGATATTTTTGGACAAAACTTGGTATTTCAATTGTTCATGAGGAATAACCCCTTCCCCCCCCCCCCCCCCCCCATAATTCATGGTATAGTTGTCATCTTTCATCTATCATTCAATTGATTCATGGTACAGTTGTCAAGTAGTTGAGAATTTGGTTCCTCGTACATTATGAGACTTTGGTATGTATCTTCTTGTTGTTGGTTTTTTGTTTCTTTGCTTGGTGGGATTGTACATTTAAGTTTATATAAACTTAAGCACCTTAGATTTGGTTTTTGTTTCTTTGCTTGGTGGCATTGCAAGTAGTTAAGATTCCTATTTTTTCCTTATTTCTTGTTGGTTTTGGTTCATTATACTAGTGTAGAATTGGTGGCATTTTCCTACTTGATTTCTTCTCTTGTTTGGAATGAGTATGCTCAATTATTTCGATTATATGATTTATACTTTGGTATGCAAGGTATCATTTCTTTTCCCTTTAGCTCCATTGATTTAAGTTCCTTATGAAGCTGAGGTATCGATACTAGTTATGATAATGTTTGTTGCTCTACTAATGTTATGATAATGTTTTTAGAGGGAAGCTGAAATGCAAGGAATGTACGCAAGGTAG ATTATAGAAAGGAGACAAGCTGAAGCTGCTCGCATCAGGGAGAAATACCTAGATAGAATTCCCGATATTGTGGAGAAAGCTGAAAGGAGCAACATTTCTGACATAGATAAGAGAAACTTTGATAAAGTCAAGGCCACTCTCAAAGGTTCTATGAAATTAAAGGTCATAGTGCCAAACACAGAGAAAGCAACGGTCGTGAGTGCTTCAATAAGGCATGAGTTATCGAGCATTTTCTTCGAGAGGGAAGCTGAAATGCAAGGAATGTACGCAAGGTAG ATTATAGAAAGGAGACAAGCTGAAGCTGCTCGCATCAGGGAGAAATACCTAGATAGAATTCCCGATATTGTGGAGAAAGCTGAAAGGAGCAACATTTCTGACATAGATAAGAGAAACTTTGATAAAGTCAAGGCCACTCTCAAAGGTTCTATGAAATTAAAGGTCATAGTGCCAAACACAGAGAAAGCAACGGTCGTGAGTGCTTCAATAAGGCATGAGTTATCGAGCATTTTCTTCGAGAGGGAAGCTGAAATGCAAGGAATGTACGCAAGGTAG IIERRQAEAARIREKYLDRIPDIVEKAERSNISDIDKRNFDKVKATLKGSMKLKVIVPNTEKATVVSASIRHELSSIFFEREAEMQGMYAR Homology
BLAST of MELO3C035561 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy Swiss-Prot
Match: A2XXR7 (Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.4e-08 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy Swiss-Prot
Match: Q7XPR1 (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8B PE=3 SV=2) HSP 1 Score: 58.5 bits (140), Expect = 4.4e-08 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 5.8e-08 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy Swiss-Prot
Match: Q6Z1D5 (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.8e-08 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of MELO3C035561 vs. NCBI nr
Match: KAA0065879.1 (PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa] >TYK15138.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 104.4 bits (259), Expect = 5.4e-19 Identity = 78/165 (47.27%), Postives = 80/165 (48.48%), Query Frame = 0
BLAST of MELO3C035561 vs. NCBI nr
Match: XP_016903219.1 (PREDICTED: uncharacterized protein LOC103502427 isoform X2 [Cucumis melo] >KAA0039695.1 pre-mRNA-processing factor 39 isoform X3 [Cucumis melo var. makuwa] >TYJ96187.1 pre-mRNA-processing factor 39 isoform X3 [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 1.6e-07 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of MELO3C035561 vs. NCBI nr
Match: KAA0033351.1 (PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo var. makuwa] >TYK21557.1 PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.3e-06 Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C035561 vs. NCBI nr
Match: ONK60990.1 (uncharacterized protein A4U43_C08F24840 [Asparagus officinalis]) HSP 1 Score: 62.4 bits (150), Expect = 2.3e-06 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of MELO3C035561 vs. NCBI nr
Match: KAG7012364.1 (Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 62.4 bits (150), Expect = 2.3e-06 Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy TrEMBL
Match: A0A5D3CV69 (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00760 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19 Identity = 78/165 (47.27%), Postives = 80/165 (48.48%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy TrEMBL
Match: A0A5D3BAP5 (Pre-mRNA-processing factor 39 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold261G00140 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.9e-08 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy TrEMBL
Match: A0A1S4E4R6 (uncharacterized protein LOC103502427 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502427 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.9e-08 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy TrEMBL
Match: A0A5A7SV72 (PHD finger protein ALFIN-LIKE 3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00510 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of MELO3C035561 vs. ExPASy TrEMBL
Match: A0A199VX49 (Autophagy-related protein OS=Ananas comosus OX=4615 GN=ACMD2_08869 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06 Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 0
BLAST of MELO3C035561 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08 Identity = 26/39 (66.67%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of MELO3C035561 vs. TAIR 10
Match: AT2G05630.2 (Ubiquitin-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 7.8e-08 Identity = 25/39 (64.10%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of MELO3C035561 vs. TAIR 10
Match: AT4G16520.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 7.8e-08 Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of MELO3C035561 vs. TAIR 10
Match: AT4G16520.2 (Ubiquitin-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 7.8e-08 Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of MELO3C035561 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07 Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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