MELO3C035552 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035552
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family, putative
Location	chr12: 8537528 .. 8538938 (+)
RNA-Seq Expression	MELO3C035552
Synteny	MELO3C035552

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTCCTCTTCATTAAGGAAACCAAAACACATCTTCTTATACTTCCCATCAACATCTCCCTTCACTTATAGCATGAGGGAGAAAAAAAAATCAAAACCACCCAAAAAAGAAAAAAGGTAAGAATTTTGTGAAGAACAACAAATGAGGAGCATTACTACAACAAAAGGAGAAGCATCATCGTCAAGAAAAAGCTCTAAAGGGCAAAATGAGACAACAAAAAAGACAAGAATTATAAGAATCATAGGAAGATGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTGGTGTTCCCCAAAAATCCTCGTTTCGTTGTGGAAACTGGCAAAGTAATAGCCCATAATTCAACTCATAATATGCTCAATGCTACCATAGCTTTCACTGTTAAATGCTACAACCCCAACAAAAGAGCCTCCATTCATTTGCACTCTATGAGGATGATAATTACTAGTATGGGCCAGGCATTTTCGTCCGCCATGCCGATGTTTATGCAGACTCCTGGAAACCAAACCGTCTTGTCCCCTGCTGTCGATGTCAACTTCGACTACCCATTTGGGCACCGGGAAGAGATAAATCCCGAGCTTCACTTCTCTGCTGAAATCAGGTATAAAACATTTGACTTTTGATACATATCTGGGGTGCATCTTAATATACACCTATCTTCTTTATGCATTCCATAATCAAATCACACACACCACAATAATAAAATAAAATATTTGATAAAAAATGTAAGAATAATTTGTCACTTGAAAAATTGTGATTAAAGAATTTGATTGTATAGATAAATATAGGTGTAGTTTGGAAAACCCTTACTTCTTTTTCTACATATATAATCTATTGTTAGGTTTCGTTGAGGTCAAATTTTTTACTTTAATAAAATCATTTGGTTTGCCTCGATTTTCACCTGAATTACTAACGTGATAACTAGTTCTCGTTGTTAGATTTTGAAAATTGACTAGGCTTACTTCTACAAATAAATATCTTTCTTTTGCCATCTACTTTAATTTCTATTTTTAAAATATAAGCCTATTTTTTTAACACTAAAAAAGTAGTTCTTAGAATTTTCTTTCTAAATAATTCCTACTTTCGGCTCTGTTGTTATCAGCTATAGTGTCGGGCACTGGACGTCGAGACCTCGGTTGCTCCAGATCTATTGTAATAATCTCTTGCTGAGGATCAATGATACTAGAACTTTTGAAAATACCAAATGCAATGTGGATCTTTGAGATCTGATATATTTGTTTATGTTATTCTTGTTGAATAATCCAACAGATTTGTAACCTAAAAAGTTCATTTTTCTTTTCGGTTTTTTTTTTTCTAATAATCAAGAAAAATGTTATGGAACATGTGAGAGGTTCAGACAGGTTAGAGTATATTATAGAATTTGTTATA

mRNA sequence

TGTTCCTCTTCATTAAGGAAACCAAAACACATCTTCTTATACTTCCCATCAACATCTCCCTTCACTTATAGCATGAGGGAGAAAAAAAAATCAAAACCACCCAAAAAAGAAAAAAGGTAAGAATTTTGTGAAGAACAACAAATGAGGAGCATTACTACAACAAAAGGAGAAGCATCATCGTCAAGAAAAAGCTCTAAAGGGCAAAATGAGACAACAAAAAAGACAAGAATTATAAGAATCATAGGAAGATGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTGGTGTTCCCCAAAAATCCTCGTTTCGTTGTGGAAACTGGCAAAGTAATAGCCCATAATTCAACTCATAATATGCTCAATGCTACCATAGCTTTCACTGTTAAATGCTACAACCCCAACAAAAGAGCCTCCATTCATTTGCACTCTATGAGGATGATAATTACTAGTATGGGCCAGGCATTTTCGTCCGCCATGCCGATGTTTATGCAGACTCCTGGAAACCAAACCGTCTTGTCCCCTGCTGTCGATGTCAACTTCGACTACCCATTTGGGCACCGGGAAGAGATAAATCCCGAGCTTCACTTCTCTGCTGAAATCAGCTATAGTGTCGGGCACTGGACGTCGAGACCTCGGTTGCTCCAGATCTATTGTAATAATCTCTTGCTGAGGATCAATGATACTAGAACTTTTGAAAATACCAAATGCAATGTGGATCTTTGAGATCTGATATATTTGTTTATGTTATTCTTGTTGAATAATCCAACAGATTTGTAACCTAAAAAGTTCATTTTTCTTTTCGGTTTTTTTTTTTCTAATAATCAAGAAAAATGTTATGGAACATGTGAGAGGTTCAGACAGGTTAGAGTATATTATAGAATTTGTTATA

Coding sequence (CDS)

ATGAGGAGCATTACTACAACAAAAGGAGAAGCATCATCGTCAAGAAAAAGCTCTAAAGGGCAAAATGAGACAACAAAAAAGACAAGAATTATAAGAATCATAGGAAGATGTTTGTTGAGTGTAATATTTCTTGTTGGTCTTGCAATGGTCATATGTTGGCTTGTGGTGTTCCCCAAAAATCCTCGTTTCGTTGTGGAAACTGGCAAAGTAATAGCCCATAATTCAACTCATAATATGCTCAATGCTACCATAGCTTTCACTGTTAAATGCTACAACCCCAACAAAAGAGCCTCCATTCATTTGCACTCTATGAGGATGATAATTACTAGTATGGGCCAGGCATTTTCGTCCGCCATGCCGATGTTTATGCAGACTCCTGGAAACCAAACCGTCTTGTCCCCTGCTGTCGATGTCAACTTCGACTACCCATTTGGGCACCGGGAAGAGATAAATCCCGAGCTTCACTTCTCTGCTGAAATCAGCTATAGTGTCGGGCACTGGACGTCGAGACCTCGGTTGCTCCAGATCTATTGTAATAATCTCTTGCTGAGGATCAATGATACTAGAACTTTTGAAAATACCAAATGCAATGTGGATCTTTGA

Protein sequence

MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMPMFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRINDTRTFENTKCNVDL

Homology

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BLAST of MELO3C035552 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08
Identity = 50/174 (28.74%), Postives = 81/174 (46.55%), Query Frame = 0


Query: 44  LVGLAMVICWLVVFPKNPRFVVETGKV----IAHNSTHNMLNATIAFTVKCYNPNKRASI 103
           LVGLA++I +L + PK   + VE   V    I +N  H  +NA  ++ +K YNP K  S+
Sbjct: 50  LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDH--INAKFSYVIKSYNPEKHVSV 109

Query: 104 HLHSMRMIITSMGQAFS-SAMPMFMQTPGNQT-VLSPAVDVNFDY-PFGHRE-------- 163
             HSMR+      Q+ +   +  F Q P N+T + +  V  N     F  R+        
Sbjct: 110 RYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKG 169

Query: 164 EINPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRINDTRT--FENTKCNVDL 201
            I  E++ +A +SY    + SR R L+  C  +++ +  +    F+   C   L
Sbjct: 170 TIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of MELO3C035552 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 49/190 (25.79%), Postives = 85/190 (44.74%), Query Frame = 0


Query: 30  IIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKV--IAHNSTHNMLNATIAFT 89
           ++ +  + ++S+I ++G+A +I WL+V P+  +F V    +    H S  N+L   +A T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 90  VKCYNPNKRASIHLHSMRMIITSMGQAFSS-AMPMFMQTPGNQTVLSPAVDVNFDYPFG- 149
           V   NPNKR  ++   +       G+ FS+  +  F Q   N TVL+P         F  
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 150 ------HREEI----NPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRIN------DTR 200
                 + E I    N E+ F   + + +G    R    ++ C++L L ++       T 
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 216

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BLAST of MELO3C035552 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 6.5e-04
Identity = 30/121 (24.79%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 21  QNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKVIAHN---STH 80
           +N    + ++IR I   ++ V+F++ L +++ W ++ P  PRF+++   V A N   +  
Sbjct: 5   ENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPP 64

Query: 81  NMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQ--AFSSAMPMFMQTPGNQTVLSPA 137
           N+L +    T+   NPN +  I+   + +  T   Q   F +++P   Q   +  + SP 
Sbjct: 65  NLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPF 124

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BLAST of MELO3C035552 vs. NCBI nr
Match: XP_008462337.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0040676.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK08761.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60
           MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120
           PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180
           MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

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BLAST of MELO3C035552 vs. NCBI nr
Match: XP_011648454.1 (uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hypothetical protein Csa_022804 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 2.8e-97
Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TT KGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120
           PR  VETG+VIAHNSTHNMLNATI FTVKCYNPNKRAS+HLHSMRMI+TSMGQAFSS +P
Sbjct: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120

Query: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180
            FMQTPGNQTVLSPAV+VNFDYPFGH+EEINPELHFSAEISYSV HWTSRPRLL IYCNN
Sbjct: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of MELO3C035552 vs. NCBI nr
Match: XP_038895359.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 258.8 bits (660), Expect = 3.8e-65
Identity = 136/203 (67.00%), Postives = 164/203 (80.79%), Query Frame = 0


Query: 1   MRSITTTKGEAS--SSRKSS-KGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVF 60
           MRS T T+GE S  SS++SS + Q+ T K+TRIIRIIGR LL VIFLVGLA++ICWLVV 
Sbjct: 1   MRS-TATQGETSSPSSKQSSYRQQHGTAKRTRIIRIIGRSLLGVIFLVGLAIIICWLVVV 60

Query: 61  PKNPRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSS 120
           PK PR +VETG VI H+STHNML ATI FT + YNPNKRA+IH++SMRMI+ S+G+ F S
Sbjct: 61  PKTPRLIVETGNVIVHSSTHNMLKATIVFTFRSYNPNKRATIHMYSMRMIVNSIGERFLS 120

Query: 121 AMPMFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIY 180
            +P F  TP NQTVLS AV VNF+YPFG  EEI+PEL FSAE+SYS+  W S+PRLL+IY
Sbjct: 121 DIPSFTLTPENQTVLSSAVRVNFEYPFGFNEEIDPELRFSAEVSYSINGWMSKPRLLEIY 180

Query: 181 CNNLLLRINDTRTFENTKCNVDL 201
           CN+LLL+IN + TF+NTKC VDL
Sbjct: 181 CNHLLLKINASTTFDNTKCKVDL 202

[Close]

BLAST of MELO3C035552 vs. NCBI nr
Match: XP_038895526.1 (NDR1/HIN1-like protein 26 isoform X1 [Benincasa hispida])

HSP 1 Score: 257.3 bits (656), Expect = 1.1e-64
Identity = 128/193 (66.32%), Postives = 157/193 (81.35%), Query Frame = 0


Query: 8   KGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVET 67
           +G   +S++ S  ++ TTK+TRIIRIIGR LLSVI L+GLA++ CW+VVFPK PRF+VET
Sbjct: 2   RGNIEASKQRSNEKHGTTKRTRIIRIIGRSLLSVIILIGLAIITCWIVVFPKTPRFLVET 61

Query: 68  GKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMPMFMQTPG 127
           G+VIA +ST  MLNATIA+TVK YNPNKRASIH+ SMRMI+T+MGQ FSS +P F Q PG
Sbjct: 62  GQVIAISSTRTMLNATIAYTVKSYNPNKRASIHMDSMRMIVTNMGQTFSSDIPTFTQKPG 121

Query: 128 NQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRIND 187
           N TVLS AV  NF+YPFG +EEI+P L F A++SYSV  W S+PRLL+IYC+ L L IND
Sbjct: 122 NLTVLSSAVQGNFEYPFGFKEEIDPNLRFEAKVSYSVERWMSKPRLLEIYCDRLWLLIND 181

Query: 188 TRTFENTKCNVDL 201
           +RTFENT+C VDL
Sbjct: 182 SRTFENTECKVDL 194

[Close]

BLAST of MELO3C035552 vs. NCBI nr
Match: XP_008462348.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-64
Identity = 125/176 (71.02%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 25  TKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKVIAHNSTHNMLNATI 84
           TK+TR+IR++GR LL VIFLV L M+ICWLVV PK PR +VETGKV+ H+ST +MLNATI
Sbjct: 13  TKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATI 72

Query: 85  AFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMPMFMQTPGNQTVLSPAVDVNFDYPF 144
           AFTVK YNPNKRASIH+  MRMI+ +MG  FSSA+P F  TP NQTVL  AV VNF+YPF
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPF 132

Query: 145 GHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRINDTRTFENTKCNVDL 201
           G+ EEINPEL FSAE+SYSV  W S+PRLL+IYCN+LLL+IND+ TF+NTKC VDL
Sbjct: 133 GYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL 188

[Close]

BLAST of MELO3C035552 vs. ExPASy TrEMBL
Match: A0A5A7TF76 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00100 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.6e-107
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60
           MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120
           PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180
           MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of MELO3C035552 vs. ExPASy TrEMBL
Match: A0A1S3CGR5 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.6e-107
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60
           MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120
           PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180
           MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of MELO3C035552 vs. ExPASy TrEMBL
Match: A0A0A0LVK9 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 183/200 (91.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TT KGEASSS+KSSKGQNETTKKTRIIRIIGR LLSVIFLVGLAMVICWLVVFPKN
Sbjct: 1   MRSSTTAKGEASSSKKSSKGQNETTKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120
           PR  VETG+VIAHNSTHNMLNATI FTVKCYNPNKRAS+HLHSMRMI+TSMGQAFSS +P
Sbjct: 61  PRIFVETGRVIAHNSTHNMLNATIVFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIP 120

Query: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180
            FMQTPGNQTVLSPAV+VNFDYPFGH+EEINPELHFSAEISYSV HWTSRPRLL IYCNN
Sbjct: 121 TFMQTPGNQTVLSPAVEVNFDYPFGHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNN 180

Query: 181 LLLRINDTRTFENTKCNVDL 201
           LLLRINDTRTFENTKCNVDL
Sbjct: 181 LLLRINDTRTFENTKCNVDL 200

[Close]

BLAST of MELO3C035552 vs. ExPASy TrEMBL
Match: A0A1S3CGS4 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 9.0e-65
Identity = 125/176 (71.02%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 25  TKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKVIAHNSTHNMLNATI 84
           TK+TR+IR++GR LL VIFLV L M+ICWLVV PK PR +VETGKV+ H+ST +MLNATI
Sbjct: 13  TKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVVHSSTISMLNATI 72

Query: 85  AFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMPMFMQTPGNQTVLSPAVDVNFDYPF 144
           AFTVK YNPNKRASIH+  MRMI+ +MG  FSSA+P F  TP NQTVL  AV VNF+YPF
Sbjct: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLWSAVQVNFEYPF 132

Query: 145 GHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRINDTRTFENTKCNVDL 201
           G+ EEINPEL FSAE+SYSV  W S+PRLL+IYCN+LLL+IND+ TF+NTKC VDL
Sbjct: 133 GYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL 188

[Close]

BLAST of MELO3C035552 vs. ExPASy TrEMBL
Match: A0A0A0LY09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.5e-64
Identity = 130/199 (65.33%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60
           MRS TTT              +  TK+TR+IR++GR LL VIFLV L M+ICWLVV PK+
Sbjct: 1   MRSTTTTT------------THGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKS 60

Query: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120
           PR +VETGKVIAH+ST +MLNATIAFTVK YNPNKRASIH+  MRMI+ +MG  FSSA+P
Sbjct: 61  PRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIP 120

Query: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180
            F  TP NQTVLS AV VNF+YPFG+ EEINPEL FSAE+SYS+  W S+PRLL+IYCN+
Sbjct: 121 SFTLTPRNQTVLSSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNH 180

Query: 181 LLLRINDTRTFENTKCNVD 200
           +LL+IND+  F+NTKC VD
Sbjct: 181 ILLKINDSTAFDNTKCKVD 187

[Close]

BLAST of MELO3C035552 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 48/187 (25.67%), Postives = 91/187 (48.66%), Query Frame = 0


Query: 26  KKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKVIAHNSTH-NMLNATI 85
           ++  +I  I   +L++IF+  +  +I WL   PK  R+ VE   V   N T+ N ++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 86  AFTVKCYNPNKRASIHLHSMRMIITSMGQ--AFSSAMPMFMQTPG----NQTVLSPAVDV 145
            FT++ +NPN R S++  S+ + +    Q  AF +  P           ++T+++  V V
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAV 140

Query: 146 NFDYPFGHREE-----INPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRINDTRTFEN 201
           +       R +     I  E+   A + + VG W S  R  +I C+++ + ++     +N
Sbjct: 141 SKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQN 200

[Close]

BLAST of MELO3C035552 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 50/174 (28.74%), Postives = 81/174 (46.55%), Query Frame = 0


Query: 44  LVGLAMVICWLVVFPKNPRFVVETGKV----IAHNSTHNMLNATIAFTVKCYNPNKRASI 103
           LVGLA++I +L + PK   + VE   V    I +N  H  +NA  ++ +K YNP K  S+
Sbjct: 50  LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDH--INAKFSYVIKSYNPEKHVSV 109

Query: 104 HLHSMRMIITSMGQAFS-SAMPMFMQTPGNQT-VLSPAVDVNFDY-PFGHRE-------- 163
             HSMR+      Q+ +   +  F Q P N+T + +  V  N     F  R+        
Sbjct: 110 RYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKG 169

Query: 164 EINPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRINDTRT--FENTKCNVDL 201
            I  E++ +A +SY    + SR R L+  C  +++ +  +    F+   C   L
Sbjct: 170 TIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of MELO3C035552 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 49/190 (25.79%), Postives = 85/190 (44.74%), Query Frame = 0


Query: 30  IIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKV--IAHNSTHNMLNATIAFT 89
           ++ +  + ++S+I ++G+A +I WL+V P+  +F V    +    H S  N+L   +A T
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 90  VKCYNPNKRASIHLHSMRMIITSMGQAFSS-AMPMFMQTPGNQTVLSPAVDVNFDYPFG- 149
           V   NPNKR  ++   +       G+ FS+  +  F Q   N TVL+P         F  
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 150 ------HREEI----NPELHFSAEISYSVGHWTSRPRLLQIYCNNLLLRIN------DTR 200
                 + E I    N E+ F   + + +G    R    ++ C++L L ++       T 
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 216

[Close]

BLAST of MELO3C035552 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-05
Identity = 30/111 (27.03%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 32  RIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKVIAHNST-HNMLNATIAFTVKC 91
           R I   + +++ ++G+  +I WLV  P  PR  V    +   N T   +++ ++ F+V  
Sbjct: 42  RAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLA 101

Query: 92  YNPNKRASIHLHSMRMIITSMGQAFSSAMPMFMQTPGNQT--VLSPAVDVN 140
            NPN+R SIH   + M +T   Q  +  +P+     G+++  V++P +  N
Sbjct: 102 RNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGN 152

[Close]

BLAST of MELO3C035552 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 45.8 bits (107), Expect = 4.6e-05
Identity = 30/121 (24.79%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 21  QNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKNPRFVVETGKVIAHN---STH 80
           +N    + ++IR I   ++ V+F++ L +++ W ++ P  PRF+++   V A N   +  
Sbjct: 5   ENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPP 64

Query: 81  NMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQ--AFSSAMPMFMQTPGNQTVLSPA 137
           N+L +    T+   NPN +  I+   + +  T   Q   F +++P   Q   +  + SP 
Sbjct: 65  NLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSPF 124

The following BLAST results are available for this feature:

BLAST of MELO3C035552 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	2.0e-08	28.74	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9SJ52	1.6e-05	25.79	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN0	6.5e-04	24.79	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]

BLAST of MELO3C035552 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462337.1	1.2e-106	100.00	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0040676.1 NDR1/HIN1-like...	[more]
XP_011648454.1	2.8e-97	91.50	uncharacterized protein LOC105434469 [Cucumis sativus] >KGN64867.1 hypothetical ...	[more]
XP_038895359.1	3.8e-65	67.00	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
XP_038895526.1	1.1e-64	66.32	NDR1/HIN1-like protein 26 isoform X1 [Benincasa hispida]	[more]
XP_008462348.1	1.9e-64	71.02	PREDICTED: protein YLS9-like [Cucumis melo]	[more]

BLAST of MELO3C035552 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TF76	5.6e-107	100.00	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CGR5	5.6e-107	100.00	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103500709 PE=4 SV=1	[more]
A0A0A0LVK9	1.4e-97	91.50	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 ...	[more]
A0A1S3CGS4	9.0e-65	71.02	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1	[more]
A0A0A0LY09	1.5e-64	65.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1	[more]

BLAST of MELO3C035552 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	1.1e-11	25.67	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	1.4e-09	28.74	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	1.1e-06	25.79	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01410.1	1.6e-05	27.03	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	4.6e-05	24.79	NDR1/HIN1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 25..196
None	No IPR available	PANTHER	PTHR31852:SF1	NDR1/HIN1-LIKE PROTEIN 6	coord: 25..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035552.1	MELO3C035552.1	mRNA