MELO3C035543.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C035543.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	DEAD-box ATP-dependent RNA helicase 28
Location	chr12: 8677947 .. 8681045 (+)
RNA-Seq Expression	MELO3C035543.jh1
Synteny	MELO3C035543.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAGTTGGAGCAAATTCTGATATTCATTGGGTGCTTTTTGATGAAGAAAACAGCGTAGCTGGTTTTCACGTAAATTCAGGAGGTCTTTGGTTTTTCTTGTATTTCAGAGAGTACTGGTGGAGTTAGGATTTCTATTTGGTATGGTTGGAGAACTTATTCAATTTACTACAATGTTTGTAAAGAAATTGTAAGCTAAATATAATTGGAAGTAAGTTTAATTTCATAAACAATTCAGCGGATAGCAGAAGACTTCATTTTTTAACTCTCTCTGTTTCGGGCCATTTCTGTAGCAATCTGTTGGGAATCATATTTTATTTTCTTCAGATAAATTATACAAGATATGCAAATGAAGATTTTAATATAAAGAACACTCATTTTGGTTAAGTATTGAGGGAGTTATAGTCATTTGAAGTTTATGTTAGAAATCTGAAAATTTTAGAGAGTTGTTGAAATTGGATTTTATATCTTAAGCTTTGTTTTCATGAGCGTCATCTTTAGTGCAACATGTTATGTATATCTTTAGAAAACCAGAATGTTTAGAGTTCTAATACTCGGTTGGGTTGTTGGCAGGCCGAGAAGAATTAAACTAAGCTTACAGACTAAGGATCTAGCCCAAGACTGTGAGTGACAAAACCAATTTTGAAATATTTTCCATAACTGTTATTTATGATTGAATGCGATAAATGTTTATTTACGAAGCCATGAAAGGTATTTGAATTTCATGACTATTTTCAAGTATACATTTGGAGACTAGATTTCTTAATGAAATTTATGCTAGCACGTGGATATTAAATGTTTGGAAAGTATTTAAACCACAATGTTTTAAGCAAAGCATGAATTAGTAAGAAGTTTTGTTTTAAGAACTACAATTTTCCACGAAAGAGCTGAGTAAAGTTTGAGCTTTGTGTAAGATTTATAAGCAGACATGTTTTAATATTTTTAGATGATTTATGAAATTTTCATTAATTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCAAACTTGTTAGATTCCGTTTTTGACGTTGAGTGAACTCCGTGACAACAATGCTGTCGTGAATGTTGGGTGGGCCCCACTACATCATAGAGCTTGTAAACGTTGTTGTACTGGGTGTACCCTACACAACGTAGATTTGTCATGTTAGTTAAAATATTTCGATATACTTGATATGCATTGCTAGATTTCAATGACGTACATGCTGAGTATTTGAGAAAGCTATTCTTACTACTACACGTTTACATTTACGACTTGTATAAATAGATTTATATGTGTAAAGTTTTCACGTGCTCTTATCTTTAAATTTATAGTTTTAAACCGAGTCATTCACTGAGCTTTATAGCTCACCCTTTCCAAAATGTTTTATCCATTTTCCAGGTAGAGATCGAGTTTCCGGTGCCTGATAGACTGCCTTAGTCTGCTGAAGCTCCGTTATCGATTGTCAGTACGTGTTTCGATTTGGGCATAAAGTCTGTTGTGTTATGATGTATATACACCCTTGTATGTTATAGATACTCCACAGTTTGTATAAGATTTAGGAGCTGCAGTTGTGTAAATTTTTGTTGGTTATATTTTTATTAAGGCGTCTTTAGGTTTACTCCTCGTCGCCACCTACGAATCTCCAACTCTGAAGACCACGAGCGGTATTATTCCTCTTTGGCCAACTACGTTCAACGGGGTTTTCATCCCTTTTGACCAGGTTCCACCCTGACCCATTTTTATTTAGATTTATATCTAAGTCACACACTTCTTAATAGCTCTAAATACGTAGGATTAAGCATATATAGACATGTTCTAGCAAGAATCCAAGTTCTGAATATTCTAAGTTGTCGTTTGGAGTAGTAAGTTCGAACATTAAGTTTAAGATGTTTAAATTTGTCTCCAGCGCTGGTAAACTCTTATATGTTGACTCAAAGTAGTTTATGAACTATTTGAACGCTTTTTAGTGAGGAACCAGGTCTATATTGTTGAGGTTTAGGCATTTGAACTCCATTTACAACATTTTGATTTTAGCTAAAGTGCTATTTTTTAGTTTTTAACCCTTGAAAATTTTGATCATAAGCACATTTCATTAAATACTCTCTGGCTTCTGAACTCTGGTTTTTCAGTTTTTTACCCTTGAATACTCTTTGGCAACCTCAAAGCCTTTTATCTGTTGGATGATATTTTAGTTACCGATAATATGTATTTTGCTTGCAGGGTGGTCAGATTACGTAGAATGCGTGAAGTGAATCAAGAAGTTGTCCTCCTATCTTTATGCTTAAAGACATTTACTTCTAAAGTTATTGTATTTAGGTATTGTAGACGAGAATTTCATGAGCTAGCTCAACTTTATTTTTGGCACTTTTTAACTGGAAGGGTGCATCTAATTCTTTTACTCTTAGAAGCAACTGCCTTCTGGATCGACTGAGTCTAATTAATTTATTACTTTTTCTATAAACTAGTTAGATTTATTTTCATTCTTTTTGGTTGAGAACCAAACAGGCTGCTCATAGGCTAAAGATTTTATTTGGATTAGCTGGTTTTGAAGCTATTGAACTTCATGGAAATCTTACCCAAGTTCAACTTCTTGATGTGAGTGATTTCCTGATAACATGTTTATTATATGAATAATTTAATTAAGACCCTCAGTTTCCCCTTCTACATGCTGATCATTATTTGATTTTGTTATGTATGGGCCTTGGAACTTTTCAGGAAACAACAAGTTTATTTTCTTATTTCTACAGATGTGGCTGCTCTGGTGCGAACTCTTTTTGATTTTGTTTCTTGTCTTGTAGATACAATATAGTTGAAAAAAAATCAGGTACATTAATTTTACTGATATGTTTTTGTGGCAATTTATCTATGGTTGAAATGTTGTGTAGGGACTGGATATTGAACTTATGTATTGGACTATAAAGTTGAACAAGCCTTTTGCTTTGCTTAGGATTTGATGGAAAAAACTATCGTACTTGCTTTGGCCACTGGAAAAAAGAGATTTAGTGTAACTTTATGCAAGTTTGTTGAGAAATATGCTGAAATATTGGCAAGTCAAGGACAGCTAACAATGGCACTGGAATATGTTAAGTTATGCTGAAATATG

mRNA sequence

ATGAAGAAAGTTGGAGCAAATTCTGATATTCATTGGGTGCTTTTTGATGAAGAAAACAGCGTAGCTGGTTTTCACGTAAATTCAGGAGGTCTTTGGTTTTTCTTGTATTTCAGAGAGTACTGGTGGAGTTAGGATTTCTATTTGGTATGGTTGGAGAACTTATTCAATTTACTACAATATGATTTATGAAATTTTCATTAATTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCAAACTTGTTAGATTCCGTTTTTGACGTTGAGTGAACTCCGTGACAACAATGCTGTCGTGAATGTTGGGTGGGCCCCACTACATCATAGAGCTTGTAAACGTTGTTGTACTGGGTGTACCCTACACAACGTAGATTTGCGTCTTTAGGTTTACTCCTCGTCGCCACCTACGAATCTCCAACTCTGAAGACCACGAGCGGTATTATTCCTCTTTGGCCAACTACGTTCAACGGGGTTTTCATCCCTTTTGACCAGACATGTTCTAGCAAGAATCCAAGTTCTGAATATTCTAAGTTGTCGTTTGGAGTAGTAAGTTCGAACATTAAGTTTAAGATGTTTAAATTTGTCTCCAGCGCTGGTAAACTCTTATATGTTGACTCAAAGGTGGTCAGATTACGTAGAATGCGTGAAGTGAATCAAGAAGTTGTCCTCCTATCTTTATGCTTAAAGACATTTACTTCTAAAATTTATTTTCATTCTTTTTGGTTGAGAACCAAACAGGCTGCTCATAGGCTAAAGATTTTATTTGGATTAGCTGGTTTTGAAGCTATTGAACTTCATGGAAATCTTACCCAAGTTCAACTTCTTGATATGTGGCTGCTCTGGTGCGAACTCTTTTTGATTTTGTTTCTTGTCTTGTAGATACAATATAGTTGAAAAAAAATCAGGATTTGATGGAAAAAACTATCGTACTTGCTTTGGCCACTGGAAAAAAGAGATTTAGTGTAACTTTATGCAAGTTTGTTGAGAAATATGCTGAAATATTGGCAAGTCAAGGACAGCTAACAATGGCACTGGAATATGTTAAGTTATGCTGAAATATG

Coding sequence (CDS)

ATGTTTAAATTTGTCTCCAGCGCTGGTAAACTCTTATATGTTGACTCAAAGGTGGTCAGATTACGTAGAATGCGTGAAGTGAATCAAGAAGTTGTCCTCCTATCTTTATGCTTAAAGACATTTACTTCTAAAATTTATTTTCATTCTTTTTGGTTGAGAACCAAACAGGCTGCTCATAGGCTAAAGATTTTATTTGGATTAGCTGGTTTTGAAGCTATTGAACTTCATGGAAATCTTACCCAAGTTCAACTTCTTGATATGTGGCTGCTCTGGTGCGAACTCTTTTTGATTTTGTTTCTTGTCTTGTAG

Protein sequence

MFKFVSSAGKLLYVDSKVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELHGNLTQVQLLDMWLLWCELFLILFLVL

Homology

[Close]

BLAST of MELO3C035543.jh1 vs. NCBI nr
Match: TYK09772.1 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (266), Expect = 3.16e-26
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           ++VRLRRMREVNQEVVLLSLCLKTFTSK+       RTKQAAHRL ILFGLAGFEA ELH
Sbjct: 73  RMVRLRRMREVNQEVVLLSLCLKTFTSKVIVF----RTKQAAHRLNILFGLAGFEASELH 132

Query: 77  GNLTQVQLLD 86
           GNLTQVQLLD
Sbjct: 133 GNLTQVQLLD 138

[Close]

BLAST of MELO3C035543.jh1 vs. NCBI nr
Match: KAA0054911.1 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa] >TYK22699.1 DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (248), Expect = 1.19e-23
Identity = 56/69 (81.16%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 18  VVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELHG 77
           VVRL RMREVNQEVVLLSLC KTFTS++       RTKQAAHRLKILFGLAGFEA EL G
Sbjct: 53  VVRLHRMREVNQEVVLLSLCSKTFTSEVIVF----RTKQAAHRLKILFGLAGFEATELPG 112

Query: 78  NLTQVQLLD 86
           NLTQVQLLD
Sbjct: 113 NLTQVQLLD 117

[Close]

BLAST of MELO3C035543.jh1 vs. NCBI nr
Match: KAG6607623.1 (DEAD-box ATP-dependent RNA helicase 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 1.59e-22
Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVRLRRMREVNQE VLL+LC KTFTS++   S    TKQAAHRLKILFGLAG +A ELH
Sbjct: 139 EVVRLRRMREVNQEAVLLALCSKTFTSRVIIFS---GTKQAAHRLKILFGLAGLKAAELH 198

Query: 77  GNLTQVQLLD 86
           GNLTQVQ LD
Sbjct: 199 GNLTQVQRLD 205

[Close]

BLAST of MELO3C035543.jh1 vs. NCBI nr
Match: XP_011652411.1 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis sativus])

HSP 1 Score: 101 bits (252), Expect = 1.72e-22
Identity = 56/70 (80.00%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVRLRRMREVNQE VLLSLC KTFTSK+   S    TKQAAHRLKILFGLAGF+A ELH
Sbjct: 218 EVVRLRRMREVNQEAVLLSLCSKTFTSKVIVFS---GTKQAAHRLKILFGLAGFKAAELH 277

Query: 77  GNLTQVQLLD 86
           GNLTQVQ LD
Sbjct: 278 GNLTQVQRLD 284

[Close]

BLAST of MELO3C035543.jh1 vs. NCBI nr
Match: XP_016903576.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo])

HSP 1 Score: 101 bits (252), Expect = 1.72e-22
Identity = 56/70 (80.00%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVRLRRMREVNQE VLLSLC KTFTSK+   S    TKQAAHRLKILFGLAGF+A ELH
Sbjct: 218 EVVRLRRMREVNQEAVLLSLCSKTFTSKVIVFS---GTKQAAHRLKILFGLAGFKAAELH 277

Query: 77  GNLTQVQLLD 86
           GNLTQVQ LD
Sbjct: 278 GNLTQVQRLD 284

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZRZ8 (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana OX=3702 GN=RH28 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.3e-18
Identity = 49/70 (70.00%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVR+RR RE NQE VLLSLC +TF SK+   S    TKQAAHRLKILFGLAG +A ELH
Sbjct: 387 EVVRIRRTREANQEAVLLSLCTRTFKSKVIIFS---GTKQAAHRLKILFGLAGLKAAELH 446

Query: 77  GNLTQVQLLD 87
           GNLTQ Q LD
Sbjct: 447 GNLTQAQRLD 453

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy Swiss-Prot
Match: Q0INC5 (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0481100 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 3.8e-16
Identity = 44/70 (62.86%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVR+RR RE NQE VLL+LCLKTF  K+   S    TK +AHRLKI+FGL+G +A ELH
Sbjct: 414 EVVRIRRAREANQEAVLLALCLKTFKDKVIIFS---GTKHSAHRLKIIFGLSGMKAAELH 473

Query: 77  GNLTQVQLLD 87
           GNLTQ Q L+
Sbjct: 474 GNLTQAQRLE 480

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy Swiss-Prot
Match: Q4P9P3 (ATP-dependent RNA helicase DRS1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DRS1 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.2e-08
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 22  RRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELHGNLTQ 81
           R+  +  +  +LLSLC +TFTS+      ++R+K+ AH+LKI+FGL G  A ELHG+L+Q
Sbjct: 591 RKSEDAQRPALLLSLCTRTFTSQT---MIFVRSKKLAHQLKIVFGLLGLSAGELHGDLSQ 650

Query: 82  VQLLD 87
            Q +D
Sbjct: 651 EQRID 652

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy Swiss-Prot
Match: A1A4H6 (Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus OX=9913 GN=DDX27 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-07
Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 13  YVDSKVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEA 72
           ++  + +R+R  RE ++E ++ +L ++TFT  +     + +TK+ AHR+ IL GL G + 
Sbjct: 403 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHV---MLFTQTKKQAHRMHILLGLMGLQV 462

Query: 73  IELHGNLTQVQLLD 87
            ELHGNL+Q Q L+
Sbjct: 463 GELHGNLSQTQRLE 473

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy Swiss-Prot
Match: Q921N6 (Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus OX=10090 GN=Ddx27 PE=1 SV=3)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-07
Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 13  YVDSKVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEA 72
           ++  + +R+R  RE ++E ++ +L ++TFT  +     + +TK+ AHR+ IL GL G + 
Sbjct: 400 FLRQEFIRIRPNREGDREAIVAALLMRTFTDHV---MLFTQTKKQAHRMHILLGLLGLQV 459

Query: 73  IELHGNLTQVQLLD 87
            ELHGNL+Q Q L+
Sbjct: 460 GELHGNLSQTQRLE 470

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CEQ8 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00560 PE=4 SV=1)

HSP 1 Score: 107 bits (266), Expect = 1.53e-26
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           ++VRLRRMREVNQEVVLLSLCLKTFTSK+       RTKQAAHRL ILFGLAGFEA ELH
Sbjct: 73  RMVRLRRMREVNQEVVLLSLCLKTFTSKVIVF----RTKQAAHRLNILFGLAGFEASELH 132

Query: 77  GNLTQVQLLD 86
           GNLTQVQLLD
Sbjct: 133 GNLTQVQLLD 138

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UMW9 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00160 PE=4 SV=1)

HSP 1 Score: 100 bits (248), Expect = 5.75e-24
Identity = 56/69 (81.16%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 18  VVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELHG 77
           VVRL RMREVNQEVVLLSLC KTFTS++       RTKQAAHRLKILFGLAGFEA EL G
Sbjct: 53  VVRLHRMREVNQEVVLLSLCSKTFTSEVIVF----RTKQAAHRLKILFGLAGFEATELPG 112

Query: 78  NLTQVQLLD 86
           NLTQVQLLD
Sbjct: 113 NLTQVQLLD 117

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E5Q7 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503953 PE=3 SV=1)

HSP 1 Score: 101 bits (252), Expect = 8.33e-23
Identity = 56/70 (80.00%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVRLRRMREVNQE VLLSLC KTFTSK+   S    TKQAAHRLKILFGLAGF+A ELH
Sbjct: 218 EVVRLRRMREVNQEAVLLSLCSKTFTSKVIVFS---GTKQAAHRLKILFGLAGFKAAELH 277

Query: 77  GNLTQVQLLD 86
           GNLTQVQ LD
Sbjct: 278 GNLTQVQRLD 284

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LIW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855940 PE=3 SV=1)

HSP 1 Score: 101 bits (252), Expect = 8.88e-23
Identity = 56/70 (80.00%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVRLRRMREVNQE VLLSLC KTFTSK+   S    TKQAAHRLKILFGLAGF+A ELH
Sbjct: 355 EVVRLRRMREVNQEAVLLSLCSKTFTSKVIVFS---GTKQAAHRLKILFGLAGFKAAELH 414

Query: 77  GNLTQVQLLD 86
           GNLTQVQ LD
Sbjct: 415 GNLTQVQRLD 421

[Close]

BLAST of MELO3C035543.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CSW4 (DEAD-box ATP-dependent RNA helicase 28 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503953 PE=3 SV=1)

HSP 1 Score: 101 bits (252), Expect = 8.88e-23
Identity = 56/70 (80.00%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVRLRRMREVNQE VLLSLC KTFTSK+   S    TKQAAHRLKILFGLAGF+A ELH
Sbjct: 355 EVVRLRRMREVNQEAVLLSLCSKTFTSKVIVFS---GTKQAAHRLKILFGLAGFKAAELH 414

Query: 77  GNLTQVQLLD 86
           GNLTQVQ LD
Sbjct: 415 GNLTQVQRLD 421

[Close]

BLAST of MELO3C035543.jh1 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-19
Identity = 49/70 (70.00%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 17  KVVRLRRMREVNQEVVLLSLCLKTFTSKIYFHSFWLRTKQAAHRLKILFGLAGFEAIELH 76
           +VVR+RR RE NQE VLLSLC +TF SK+   S    TKQAAHRLKILFGLAG +A ELH
Sbjct: 387 EVVRIRRTREANQEAVLLSLCTRTFKSKVIIFS---GTKQAAHRLKILFGLAGLKAAELH 446

Query: 77  GNLTQVQLLD 87
           GNLTQ Q LD
Sbjct: 447 GNLTQAQRLD 453

The following BLAST results are available for this feature:

BLAST of MELO3C035543.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK09772.1	3.16e-26	82.86	DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0054911.1	1.19e-23	81.16	DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa] >TY...	[more]
KAG6607623.1	1.59e-22	75.71	DEAD-box ATP-dependent RNA helicase 28, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_011652411.1	1.72e-22	80.00	DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis sativus]	[more]
XP_016903576.1	1.72e-22	80.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo]	[more]

BLAST of MELO3C035543.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZRZ8	5.3e-18	70.00	DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana OX=3702 GN=RH28 P...	[more]
Q0INC5	3.8e-16	62.86	DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q4P9P3	2.2e-08	46.15	ATP-dependent RNA helicase DRS1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=2...	[more]
A1A4H6	1.4e-07	37.84	Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus OX=9913 GN=DDX27 PE=2 SV...	[more]
Q921N6	1.4e-07	37.84	Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus OX=10090 GN=Ddx27 PE=1...	[more]

BLAST of MELO3C035543.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CEQ8	1.53e-26	82.86	DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo var. makuwa OX...	[more]
A0A5A7UMW9	5.75e-24	81.16	DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo var. makuwa OX...	[more]
A0A1S4E5Q7	8.33e-23	80.00	DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LIW3	8.88e-23	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855940 PE=3 SV=1	[more]
A0A1S3CSW4	8.88e-23	80.00	DEAD-box ATP-dependent RNA helicase 28 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of MELO3C035543.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16630.1	3.8e-19	70.00	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 17..86
None	No IPR available	PANTHER	PTHR24031:SF729	BNAA01G17110D PROTEIN	coord: 17..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035543.jh1.t1	MELO3C035543.jh1.t1	mRNA