MELO3C035519 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035519
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Gag/pol protein
Location	chr12: 7315170 .. 7318883 (+)
RNA-Seq Expression	MELO3C035519
Synteny	MELO3C035519

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATTGCGTATCGTACCTTACCGCAAGCTCTTAAACCAAACAAGTCAATGTATCACTTCTTTCCCTTATCGTCGTGTTTTGCTCTCTGATTGCCGCATTCTGTTCCTTGAGCTCTATAAGTTGAATTTGGAGCTCTTGATTATGCATTTAGAGCTTCTTCAGTTCTACTTGAAGTTGATCCATCTGTGTCTGATTGCTTGCACTTGCGTTGTTAACTTTAAGTTCCAGGTCATTAATTTGCTTTAACCTCGCAGTTGCATTTCTTGTAAGATGCTCTGGCACTGGAATATGTCTTCAAATCCTCCTTCCAAAGGTTTGCAAATGAATTCACCCATGAATTTGAAGACATAATATGCGTCAACTTCTTCTTCTTCTCTCGTCGCCTCTTTCAGCTTTTCTAATCGTGTTGTGGCTTCTGGGATTAGTCTAGGCGATGAGGGGAGACTTTTCTCACTAGCAAGTGGGTCATCAACAATCTCCTCCAAGACTTCTTTCTCTTTTTCACCTTCTTTTGACTCTCTTGTTGTGTTGTGTAACAATGTTCCCTCGAAGAGTGTTTCTAAAACACATTTCGAGTTATGGAGAGGACGTAAACCTAGTTTAAGTCACTTTAGAATCTGGAATTGTCCAACACACGTGTTAGTGACAAATCCCAAGAAGTTGGAACCTCATTTAAGGTTATGCTAATTTGTTGGTTACCCTAAAGAAATGAAAGGTGGTCTATTCTTCGATCCATAAGAAAATAGAATGTTTGTATCAAAAAATGCTACTTTCTTGAAAGAAGACCACATGAGACATCATAAACCACAAAGCAAATCATTATTAAATGAAGCTACTAATGAATCAACAAGGGTTGTTGATGAAGTTGGTCTCTCATGAAGTTGGTCTCTCATCAAGAGTTGATGAAACCAACACATAAGGTCCGTCTCATTCTTCTTAATCATTGAGAATGCCTTGACGCAGTGGAAGGATTGTATCACAACCTAACCATTACTTGGGTTTAACTAAAACTCAGGTTGTCATACCAAATGATGGTGTTGAGGATCCATTGTCCTATAAATAGGCAATGAATGATGTAGAAAAGAACCAATGGATCCAAGTCATTGACCTTGAAATGAAGTCTATGTACTTCAATTCAGTGTGGGAGCTTCTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAAAGAAAGAGAGATTCAGCTGGGAAGGTACAAACCTTCAAAGCTAGACTTGTAGGAAAAGGGTATATCCAAAGGGAAGGGGTTGATTACGAGGAAACTTTTTCCCCTGTTGCTATGCTAAAGTCTATAAGGATTCTCTTGTACATAGCCACATTTTATGATTATGAAAGATGGCAAATGAATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGTTCGAGGGGTTCATAACCCAAGGTCAGGAGCAAAAAGTTTACAAGCTGAATCTATTCATTTATGGGTTGAAACAAGCATCCATTCTCGAAACATTAGGTTTGATACTGCAATCAAATCTTACGATTTTGACCAAAATGTTGATGAACCTTGTGTATACAAGAAAATCAACAAAGGTAAAGTAGCTTTCTTAGTCAACTTTGCGAATATTGATTGTTAAGCTTATGAAATCTCTTTTTTTTAATTAATATGTTATTATTTTCATGGATTGAGTTATTTGACAAGCCATTTGATTAATGAATCTAAAAGCTTAGGTGTAACGCCCCAACAAATTTGACTTTCCATTTATTATTAATGTTTAAGTGTGGTTATGGAAAATTCGAATTTTGAGGAACCTTATCATTTTGATTTGTGATTAATCAAGGTTAGAGGCATAATTATTTTTATTTTTATTTTGGTTAATTAAATTGGTAAGGTTGGTTGTTGAGGATAAAATAATTGAGGTAAGGATATTTTAATTAAAGGAATGTTGTGATTGGATGATTTTTGAAAATTTAAGATATTAGGAGTTTTGATTGGAGAGAGAGAAAGTTGTTTGTTTTGATTTAATGGAAGGAAAAGATAAAGGGTTTTTTTTATTATTTCTTATTGGTTGCTTTTTCTTATAAATGAGCCTTGGGACCCGTGCACAAGAAAATAAAAAAAGAAGAGAGAGGAGCAACCTTGTTATTTTGGGAAACCCTAGCCGCCGAAGACCCACCGCCAACCGTTGAGTCCGAGCTGAGGATCGCAAAGCCGTGCAGCCCAGCAACTGGCCGCGTGTTCCACCCGTCGCCTCCGACGTTCGAGTCGTACTGCCACCGTAGTCGAACCGTTTGCAGTCGCCAGCCGTCGCGTGAAGCTTCGTCGCGCCGTGTCGCCGAGCAGCAGCGGCCGTCGATCGTCAGCCGCACGCCTCCAGCCGTCGAAAGCCCGAGCCTACGTTTCGGCCGTTGCTCGAACCCAAAGCCGACCCACGTCCCTGCCGCAACCTGACCCGCGTCTGCTCGCTCGCCCGCGCACCGCTCCGCGCCTGCGCGCCCGCCCAGAGCCACAAGCCGAGCCTGCACGTGCCCAACCCACGCCGTAAGCCGCGCCTGTCTGCGCCGTGTCCGAGCCGATCCCTGCCTTCAAGCCGAGCCGGTTCCTGCTCCTCTAGCCGAGCTGACCCGCCTGCTCTTGAGCCGTCAGTCTGCTCCGGTTCCTTTCCACCTACTTTGGTAAGTCAAAAGTGTTTCTCACACCCAGCCAAGATTTGAAACTTTAATCTAAATAATTTAATTTGGACTAAATTAAATTATCGCTTAAGGAACGTCTTGGACCGAGTGACCTTAGAGTGTTGGATTTCTTCAGTAGGAGCTCAAGCGTTGCAACCTCGACCGTGGGTAAGTCACCTCAGTAAGTCTTGGACCAAATTTTTCCCTTGAGGGTAAATTACTAAATTGTGAACTTTTGACCCTTTAGGACTTGCGCCGCTTGGGGAAGCGTGTTGTTACTGTTAGGACTCGTCCAGCAGATCTCCAGGTAAAAGATTTCTACTACTAGCTCTGTGATTAGAACCATGAGACCGCATACACCTCCAGTTATGCATGTAAGGACTAGACTGTATAACACATGTAATTAATGAGAGCATGATGTGATTGATGACGTGGTTACATGATGGCATGATATTGTGATGACGTGATTTGTTATGACTGTATGTTGGTTATTGAGGTGAGATGTGAGATGCTGATTAGACTTTTATGATTACATGACGATGTTATGTTTATGTATGCTATGGTTAGGGTACTTGTTAGCTTAGCCTATTAGAGTCGTACCTGCATGGGTATCCTTCGGGATCACCACCTATTTAGGACTGTGTGGTCCCACGGGACGCCAGTCTAGCATGGATATAAATATGATTCGAGTGATTCGACGGGATCCTCGCAGCCCAATTGTCTTAGTGTTACCCCCGGGTTCACTACAGACCAGCATGTCCTAGGTGCTCCCCCGGGACACCGAAGACCAGATTTTCGTTCCTACCGGAGCACATGTTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCATTTTCAAGACTCTAATAGGAAGCTAACAGGCACCTAGTGGGACTAGTAGTGGGTCTCTTACTGAGTATTTTATACTTACTCTCTCCATGTCATGTTTTTTCAGGTAGAGGCCGAGGTAGGGGCAAAGGCAAGCTGGCGAGCGACTAGAAGTGACCGTGGCAAGCCATA

mRNA sequence

ATGATATTGCGTATCGTACCTTACCGCAAGCTCTTAAACCAAACAAGTCAATGTATCACTTCTTTCCCTTATCGTCGTGTTTTGCTCTCTGATTGCCGCATTCTGTTCCTTGAGCTCTATAAGTTGAATTTGGAGCTCTTGATTATGCATTTAGAGCTTCTTCAGTTCTACTTGAAGTTGATCCATCTGTGTCTGATTGCTTGCACTTGCGTTGTTAACTTTAAGTTCCAGATGCTCTGGCACTGGAATATGTCTTCAAATCCTCCTTCCAAAGCCTTGGGACCCGTGCACAAGAAAATAAAAAAAGAAGAGAGAGGAGCAACCTTGTTATTTTGGGAAACCCTAGCCGCCGAAGACCCACCGCCAACCGTTGAGTCCGAGCTGAGGATCGCAAAGCCGTGCAGCCCAGCAACTGGCCGCGTGTTCCACCCGTCGCCTCCGACGTTCGAGTCGTACTGCCACCGTAGTCGAACCGTTTGCAGTCGCCAGCCGTCGCGTGAAGCTTCGTCGCGCCGTGTCGCCGAGCAGCAGCGGCCGTCGATCGTCAGCCGCACGCCTCCAGCCGTCGAAAGCCCGAGCCTACGTTTCGGCCGTTGCTCGAACCCAAAGCCGACCCACGTCCCTGCCGCAACCTGACCCGCGTCTGCTCGCTCGCCCGCGCACCGCTCCGCGCCTGCGCGCCCGCCCAGAGCCACAAGCCGAGCCTGCACGTGCCCAACCCACGCCGTAAGCCGCGCCTGTCTGCGCCGTGTCCGAGCCGATCCCTGCCTTCAAGCCGAGCCGGTTCCTGCTCCTCTAGCCGAGCTGACCCGCCTGCTCTTGAGCCGTCAGTCTGCTCCGGTTCCTTTCCACCTACTTTGGAACGTCTTGGACCGAGTGACCTTAGAGTGTTGGATTTCTTCAGTAGGAGCTCAAGCGTTGCAACCTCGACCGACTTGCGCCGCTTGGGGAAGCGTGTTGTTACTGTTAGGACTCGTCCAGCAGATCTCCAGCCTATTAGAGTCGTACCTGCATGGGTATCCTTCGGGATCACCACCTATTTAGGACTGTGTGGTCCCACGGGACGCCAGTCTAGCATGGATATAAATATGATTCGAGTGATTCGACGGGATCCTCGCAGCCCAATTGTCTTAGTGTTACCCCCGGGTAGAGGCCGAGGTAGGGGCAAAGGCAAGCTGGCGAGCGACTAGAAGTGACCGTGGCAAGCCATA

Coding sequence (CDS)

ATGATATTGCGTATCGTACCTTACCGCAAGCTCTTAAACCAAACAAGTCAATGTATCACTTCTTTCCCTTATCGTCGTGTTTTGCTCTCTGATTGCCGCATTCTGTTCCTTGAGCTCTATAAGTTGAATTTGGAGCTCTTGATTATGCATTTAGAGCTTCTTCAGTTCTACTTGAAGTTGATCCATCTGTGTCTGATTGCTTGCACTTGCGTTGTTAACTTTAAGTTCCAGATGCTCTGGCACTGGAATATGTCTTCAAATCCTCCTTCCAAAGCCTTGGGACCCGTGCACAAGAAAATAAAAAAAGAAGAGAGAGGAGCAACCTTGTTATTTTGGGAAACCCTAGCCGCCGAAGACCCACCGCCAACCGTTGAGTCCGAGCTGAGGATCGCAAAGCCGTGCAGCCCAGCAACTGGCCGCGTGTTCCACCCGTCGCCTCCGACGTTCGAGTCGTACTGCCACCGTAGTCGAACCGTTTGCAGTCGCCAGCCGTCGCGTGAAGCTTCGTCGCGCCGTGTCGCCGAGCAGCAGCGGCCGTCGATCGTCAGCCGCACGCCTCCAGCCGTCGAAAGCCCGAGCCTACGTTTCGGCCGTTGCTCGAACCCAAAGCCGACCCACGTCCCTGCCGCAACCTGA

Protein sequence

MILRIVPYRKLLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACTCVVNFKFQMLWHWNMSSNPPSKALGPVHKKIKKEERGATLLFWETLAAEDPPPTVESELRIAKPCSPATGRVFHPSPPTFESYCHRSRTVCSRQPSREASSRRVAEQQRPSIVSRTPPAVESPSLRFGRCSNPKPTHVPAAT

Homology

[Close]

BLAST of MELO3C035519 vs. NCBI nr
Match: KAA0035190.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 219.9 bits (559), Expect = 2.0e-53
Identity = 150/314 (47.77%), Postives = 162/314 (51.59%), Query Frame = 0


Query: 10  KLLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT 69
           +LLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT
Sbjct: 88  ELLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT 147

Query: 70  CVVNFKFQML-------W---------------HWNMSSNPPS-KALGP--VHKKIKKEE 129
           CVVNFKFQ +       W                W +   P   K +G   ++K+ K++ 
Sbjct: 148 CVVNFKFQAMNDVEKNQWIQVIDLEMKSMYFNSVWELLDLPEGVKPIGCKWIYKR-KRDS 207

Query: 130 RGATLLF--------------------------------------------W-------- 189
            G    F                                            W        
Sbjct: 208 AGKVQTFKARLVGKGYIQREGVDYEETFSPVAMLKSIRILLYIATFYDYERWQMNVKTAF 267

Query: 190 ------------------------------------------ETLAAEDPPPTVESELRI 205
                                                     ETLAAEDPPPTVESELRI
Sbjct: 268 LNDNLEESIFMSQFEGFITQGQEQKVYKLNLFIYGLKQASILETLAAEDPPPTVESELRI 327

[Close]

BLAST of MELO3C035519 vs. NCBI nr
Match: TYK21803.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-49
Identity = 143/299 (47.83%), Postives = 154/299 (51.51%), Query Frame = 0


Query: 10  KLLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT 69
           +LLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT
Sbjct: 88  ELLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT 147

Query: 70  CVVNFKFQML-------W---------------HWNMSSNPPS-KALGP--VHKKIKKEE 129
           CVVNFKFQ +       W                W +   P   K +G   ++K+ K++ 
Sbjct: 148 CVVNFKFQAMNDVEKNQWIQVIDLEMKSMYFNSVWELLDLPEGVKPIGCKWIYKR-KRDS 207

Query: 130 RGATLLF--------------------------------------------W-------- 188
            G    F                                            W        
Sbjct: 208 AGKVQTFKARLVGKGYIQREGVDYEETFSPVAMLKSIRILLYIATFYDYERWQMNVKTAF 267

[Close]

BLAST of MELO3C035519 vs. NCBI nr
Match: TYK21800.1 (hypothetical protein E5676_scaffold991G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-29
Identity = 84/127 (66.14%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 92  ALGPVHKKIKKEERGATLLFWETL-------AAEDPPPTVESELRIAKPCSPATGRVFHP 151
           +LG   ++ +K++RGATLLFWETL       AAED PPTV SELR+AKP S AT RV  P
Sbjct: 2   SLGTRSQENQKKKRGATLLFWETLAADHTRCAAEDLPPTVASELRVAKPHSLATRRVLQP 61

Query: 152 SPPTFESYCHRSRTVCSRQPSREASSRRVAEQQRPSIVSRTPPAVESPSLRFGRCSNPKP 211
           SPP FESY HRSRTV SRQP     SRRV EQQR SIVSR P AVESPS  FGR  N KP
Sbjct: 62  SPPPFESYRHRSRTVRSRQP-----SRRVVEQQRSSIVSRMPLAVESPSPHFGRRPNLKP 121

[Close]

BLAST of MELO3C035519 vs. NCBI nr
Match: KAA0035188.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-27
Identity = 81/115 (70.43%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 104 ERGATLLFWETL-------AAEDPPPTVESELRIAKPCSPATGRVFHPSPPTFESYCHRS 163
           E GATLLFWETL       AAED PPTV SELR+AKP S AT RV  PSPP FESY HRS
Sbjct: 718 ELGATLLFWETLAADHTRCAAEDLPPTVASELRVAKPHSLATRRVLQPSPPPFESYRHRS 777

Query: 164 RTVCSRQPSREASSRRVAEQQRPSIVSRTPPAVESPSLRFGRCSNPKPTHVPAAT 212
           RTV SRQP     SRRV EQQR SIVSR P AVESPS  FGR  N KPT VPAAT
Sbjct: 778 RTVRSRQP-----SRRVVEQQRSSIVSRMPLAVESPSPHFGRRPNLKPTRVPAAT 827

[Close]

BLAST of MELO3C035519 vs. NCBI nr
Match: TYK22669.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-08
Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 119  DPPPTVESELRIAKPCSPATGRVFHPSPPTFESYCHRSRTVCSRQPSREASSRRVAEQQR 178
            +PP    S  +   P +    +   P+ P    +  RSRTV S  PS EASSRRV EQQR
Sbjct: 996  EPPRPPASRRQAPLPPAHCRLKPIRPASP----FATRSRTVRSHLPSCEASSRRVVEQQR 1055

Query: 179  PSIVSRTPPAVESPSLRFGRCSNPKPTHV 208
            PS+ SRTPP + S + RFGRCSNP P  +
Sbjct: 1056 PSVASRTPPVIGSLNPRFGRCSNPNPIRI 1080

[Close]

BLAST of MELO3C035519 vs. ExPASy TrEMBL
Match: A0A5A7SVY9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold346G00090 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 9.9e-54
Identity = 150/314 (47.77%), Postives = 162/314 (51.59%), Query Frame = 0


Query: 10  KLLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT 69
           +LLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT
Sbjct: 88  ELLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT 147

Query: 70  CVVNFKFQML-------W---------------HWNMSSNPPS-KALGP--VHKKIKKEE 129
           CVVNFKFQ +       W                W +   P   K +G   ++K+ K++ 
Sbjct: 148 CVVNFKFQAMNDVEKNQWIQVIDLEMKSMYFNSVWELLDLPEGVKPIGCKWIYKR-KRDS 207

Query: 130 RGATLLF--------------------------------------------W-------- 189
            G    F                                            W        
Sbjct: 208 AGKVQTFKARLVGKGYIQREGVDYEETFSPVAMLKSIRILLYIATFYDYERWQMNVKTAF 267

Query: 190 ------------------------------------------ETLAAEDPPPTVESELRI 205
                                                     ETLAAEDPPPTVESELRI
Sbjct: 268 LNDNLEESIFMSQFEGFITQGQEQKVYKLNLFIYGLKQASILETLAAEDPPPTVESELRI 327

[Close]

BLAST of MELO3C035519 vs. ExPASy TrEMBL
Match: A0A5D3DE47 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold991G00100 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 143/299 (47.83%), Postives = 154/299 (51.51%), Query Frame = 0


Query: 10  KLLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT 69
           +LLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT
Sbjct: 88  ELLNQTSQCITSFPYRRVLLSDCRILFLELYKLNLELLIMHLELLQFYLKLIHLCLIACT 147

Query: 70  CVVNFKFQML-------W---------------HWNMSSNPPS-KALGP--VHKKIKKEE 129
           CVVNFKFQ +       W                W +   P   K +G   ++K+ K++ 
Sbjct: 148 CVVNFKFQAMNDVEKNQWIQVIDLEMKSMYFNSVWELLDLPEGVKPIGCKWIYKR-KRDS 207

Query: 130 RGATLLF--------------------------------------------W-------- 188
            G    F                                            W        
Sbjct: 208 AGKVQTFKARLVGKGYIQREGVDYEETFSPVAMLKSIRILLYIATFYDYERWQMNVKTAF 267

[Close]

BLAST of MELO3C035519 vs. ExPASy TrEMBL
Match: A0A5D3DEH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold991G00060 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29
Identity = 84/127 (66.14%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 92  ALGPVHKKIKKEERGATLLFWETL-------AAEDPPPTVESELRIAKPCSPATGRVFHP 151
           +LG   ++ +K++RGATLLFWETL       AAED PPTV SELR+AKP S AT RV  P
Sbjct: 2   SLGTRSQENQKKKRGATLLFWETLAADHTRCAAEDLPPTVASELRVAKPHSLATRRVLQP 61

Query: 152 SPPTFESYCHRSRTVCSRQPSREASSRRVAEQQRPSIVSRTPPAVESPSLRFGRCSNPKP 211
           SPP FESY HRSRTV SRQP     SRRV EQQR SIVSR P AVESPS  FGR  N KP
Sbjct: 62  SPPPFESYRHRSRTVRSRQP-----SRRVVEQQRSSIVSRMPLAVESPSPHFGRRPNLKP 121

[Close]

BLAST of MELO3C035519 vs. ExPASy TrEMBL
Match: A0A5A7SX56 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold346G00060 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-27
Identity = 81/115 (70.43%), Postives = 82/115 (71.30%), Query Frame = 0


Query: 104 ERGATLLFWETL-------AAEDPPPTVESELRIAKPCSPATGRVFHPSPPTFESYCHRS 163
           E GATLLFWETL       AAED PPTV SELR+AKP S AT RV  PSPP FESY HRS
Sbjct: 718 ELGATLLFWETLAADHTRCAAEDLPPTVASELRVAKPHSLATRRVLQPSPPPFESYRHRS 777

Query: 164 RTVCSRQPSREASSRRVAEQQRPSIVSRTPPAVESPSLRFGRCSNPKPTHVPAAT 212
           RTV SRQP     SRRV EQQR SIVSR P AVESPS  FGR  N KPT VPAAT
Sbjct: 778 RTVRSRQP-----SRRVVEQQRSSIVSRMPLAVESPSPHFGRRPNLKPTRVPAAT 827

[Close]

BLAST of MELO3C035519 vs. ExPASy TrEMBL
Match: A0A5D3DHA9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001140 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.7e-09
Identity = 42/89 (47.19%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 119  DPPPTVESELRIAKPCSPATGRVFHPSPPTFESYCHRSRTVCSRQPSREASSRRVAEQQR 178
            +PP    S  +   P +    +   P+ P    +  RSRTV S  PS EASSRRV EQQR
Sbjct: 996  EPPRPPASRRQAPLPPAHCRLKPIRPASP----FATRSRTVRSHLPSCEASSRRVVEQQR 1055

Query: 179  PSIVSRTPPAVESPSLRFGRCSNPKPTHV 208
            PS+ SRTPP + S + RFGRCSNP P  +
Sbjct: 1056 PSVASRTPPVIGSLNPRFGRCSNPNPIRI 1080

The following BLAST results are available for this feature:

BLAST of MELO3C035519 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035519 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035190.1	2.0e-53	47.77	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK21803.1	3.0e-49	47.83	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK21800.1	3.5e-29	66.14	hypothetical protein E5676_scaffold991G00060 [Cucumis melo var. makuwa]	[more]
KAA0035188.1	2.5e-27	70.43	pol protein [Cucumis melo var. makuwa]	[more]
TYK22669.1	2.0e-08	47.19	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C035519 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVY9	9.9e-54	47.77	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold346G0009...	[more]
A0A5D3DE47	1.5e-49	47.83	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold991G0010...	[more]
A0A5D3DEH7	1.7e-29	66.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SX56	1.2e-27	70.43	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold346G00060 PE...	[more]
A0A5D3DHA9	9.7e-09	47.19	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of MELO3C035519 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035519.1	MELO3C035519.1	mRNA