MELO3C035481.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C035481.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionervatamin-B-like
Locationchr12: 18449797 .. 18450998 (+)
RNA-Seq ExpressionMELO3C035481.jh1
SyntenyMELO3C035481.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCTAATGCAACTCTAAAAGAGATGGAGTAGCCACCATAGGATCTCAAGGAATGCAAAACATGTGTTCAAAGTGAATCAAATGGGAAGTTCATTAAAATTACGGCTTAGCCAATTTGCTGATATATGTGATGATGAGTTTAGTAGCATACATAGTTTCAATATTACTTACTACAAAAATTTACATGCCAAGATTGGTGGTGGTCGTGTTGGTGGATTTATGTATGAACATACAAAGAAAATTCCATCTTCAATCTATTAGAGAAAAAAAGGAGTTGTGAATGCCATAAAAAATTAAGGTGGATGTGGTAATTAATTTAATTTAATTTATAATTCTTTCTAATGTCTAAAGCCTTCTAACTAATAATTATGTTAATAATTGTGTGTTTGGTAGGAAGTTGTTGGGGTTTGGAGCTGTGGCTGTGGAATCTATTCACCAAATAAAAAATCTATTCACCAAATAAAAACAAATGAGTTAGTGAGAGCAAGAGGTGGTGGGTTGTGATTATAGAGACGGTGGCTGCCATTGAGGATTCTATAACTCTACATTTGAGTTCATGAAGGAAAATGGTGGAATCACAATTGAGGATAACTATCCGTATTAGGAAGGAGATGGATATTGTCGTAGACGAGGAGTGAGTTTAAACCAATTTATTATATAATTGAATTATTCATGATATAATTATGTGTATTGTGTTTGATATTTCATTAATAAGGTTATAATGAGAGAGTGACAATTGACGGATACGAGAACGTACCTCGAAGCAACGACTATGCTTTGATAAAAGCAGTGGCATACCAACCAATAGCAATGGCTATGGCATCAGGTGGAAGTGATTTTAAATTTTACGGACAGGCAAGTATATAGTTCATTTTGTTACATATAATTTGGTGCAACATGTAAGACATTAATTATCCTTAATTAAAAGAAATATTAAACTTTGATAATTATTTACAGGGAATGTTTACGGAACAAGATTTTTGTGGATTTAATATCGACCACACAGTAGTGGTAGTTGGGTACGAAACCGATGAAGATGGAGATTATTGGATAATAAGGAACCAATATGGAACCCAATAGGGAATGAATGGTTATACGAAGATGCAAGGAGGAGCACGAAACCCAAAAGGCTAAACATTTAATTTGGGAGATCGCAATTTTTTTACTATATGAAGGTAATTTTAATTTAATTATCTTAATTT

mRNA sequence

AGCCTAATGCAACTCTAAAAGAGATGGAGTAGCCACCATAGGATCTCAAGGAATGCAAAACATGTGTTCAAAGTGAATCAAATGGGAAGTTCATTAAAATTACGGCTTAGCCAATTTGCTGATATATGTGATGATGAGTTTAGTAGCATACATAGTTTCAATATTACTTACTACAAAAATTTACATGCCAAGATTGGTGGTGGTCGTGTTGGTGGATTTATGTATGAACATACAAAGAAAATTCCATCTTCAATCTATTAGAGAAAAAAAGGAGTTGTGAATGCCATAAAAAATTAAGGTGGATGTGGAAGTTGTTGGGGTTTGGAGCTGTGGCTGTGGAATCTATTCACCAAATAAAAAATCTATTCACCAAATAAAAACAAATGAGTTAGTGAGAGCAAGAGGTGGTGGGTTGTGATTATAGAGACGGTGGCTGCCATTGAGGATTCTATAACTCTACATTTGAGTTCATGAAGGAAAATGGTGGAATCACAATTGAGGATAACTATCCGTATTAGGAAGGAGATGGATATTGTCGTAGACGAGGAGTTATAATGAGAGAGTGACAATTGACGGATACGAGAACGTACCTCGAAGCAACGACTATGCTTTGATAAAAGCAGTGGCATACCAACCAATAGCAATGGCTATGGCATCAGGTGGAAGTGATTTTAAATTTTACGGACAGGCAAATTTTTGTGGATTTAATATCGACCACACAGTAGTGGTAGTTGGGTACGAAACCGATGAAGATGGAGATTATTGGATAATAAGGAACCAATATGGAACCCAATAGGGAATGAATGGTTATACGAAGATGCAAGGAGGAGCACGAAACCCAAAAGGCTAAACATTTAATTTGGGAGATCGCAATTTTTTTACTATATGAAGGTAATTTTAATTTAATTATCTTAATTT

Coding sequence (CDS)

ATGGGAAGTTCATTAAAATTACGGCTTAGCCAATTTGCTGATATATGTGATGATGAGTTTAGTAGCATACATAGTTTCAATATTACTTACTACAAAAATTTACATGCCAAGATTGGTGGTGGTCGTGTTGGTGGATTTATGTATGAACATACAAAGAAAATTCCATCTTCAATCTATTAG

Protein sequence

MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKIGGGRVGGFMYEHTKKIPSSIY
Homology
[Close]
BLAST of MELO3C035481.jh1 vs. NCBI nr
Match: XP_008450470.1 (PREDICTED: ervatamin-B-like [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 1.38e-20
Identity = 45/58 (77.59%), Postives = 48/58 (82.76%), Query Frame = 0 

Query: 1  MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKIGGGRVGGFMYEHTKKIPSSI 58
          MG SLKLRL+QFAD+ DDEFSSIHS NITYYKNLHAK  G  VGGFMYEH K+  SSI
Sbjct: 21 MGRSLKLRLNQFADMSDDEFSSIHSSNITYYKNLHAKTVGDHVGGFMYEHAKENSSSI 78

[Close]
BLAST of MELO3C035481.jh1 vs. NCBI nr
Match: TYK30206.1 (vignain-like [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 1.79e-20
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0 

Query: 1  MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKI---GGGRVGGFMYEHTKKIPSS 58
          MG SLKL+L+QFAD+ DDEFSSIHS NITYYKNLHAK     G RVGGFMYE  K+IPSS
Sbjct: 1  MGRSLKLQLNQFADMFDDEFSSIHSSNITYYKNLHAKTIKAAGSRVGGFMYERAKEIPSS 60

[Close]
BLAST of MELO3C035481.jh1 vs. NCBI nr
Match: KAA0044593.1 (ervatamin-B-like [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 5.26e-20
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1   MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKIGGGRVGGFMYEHTKKIPSSI 58
           MG SLKL+L+QFAD+ DDEFSSIH  NITYYKNLHAK G   VGGFMYEH K+IPSSI
Sbjct: 78  MGRSLKLQLNQFADMSDDEFSSIHGSNITYYKNLHAKTG--HVGGFMYEHAKEIPSSI 133

[Close]
BLAST of MELO3C035481.jh1 vs. NCBI nr
Match: XP_008454483.1 (PREDICTED: ervatamin-B-like [Cucumis melo])

HSP 1 Score: 91.3 bits (225), Expect = 5.26e-20
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1   MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKIGGGRVGGFMYEHTKKIPSSI 58
           MG SLKL+L+QFAD+ DDEFSSIH  NITYYKNLHAK G   VGGFMYEH K+IPSSI
Sbjct: 78  MGRSLKLQLNQFADMSDDEFSSIHGSNITYYKNLHAKTG--HVGGFMYEHAKEIPSSI 133

[Close]
BLAST of MELO3C035481.jh1 vs. NCBI nr
Match: KAA0066925.1 (vignain-like [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 5.66e-20
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0 

Query: 1   MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKI---GGGRVGGFMYEHTKKIPSS 58
           MG SLKL+L+QFAD+ DDEFSSIHS NITYYKNLHAK     G RVGGFMYE  K+IPSS
Sbjct: 77  MGRSLKLQLNQFADMFDDEFSSIHSSNITYYKNLHAKTIKAAGSRVGGFMYERAKEIPSS 136

[Close]
BLAST of MELO3C035481.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BQB2 (ervatamin-B-like OS=Cucumis melo OX=3656 GN=LOC103492063 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.70e-21
Identity = 45/58 (77.59%), Postives = 48/58 (82.76%), Query Frame = 0 

Query: 1  MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKIGGGRVGGFMYEHTKKIPSSI 58
          MG SLKLRL+QFAD+ DDEFSSIHS NITYYKNLHAK  G  VGGFMYEH K+  SSI
Sbjct: 21 MGRSLKLRLNQFADMSDDEFSSIHSSNITYYKNLHAKTVGDHVGGFMYEHAKENSSSI 78

[Close]
BLAST of MELO3C035481.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E2U6 (Vignain-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00200 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 8.67e-21
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0 

Query: 1  MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKI---GGGRVGGFMYEHTKKIPSS 58
          MG SLKL+L+QFAD+ DDEFSSIHS NITYYKNLHAK     G RVGGFMYE  K+IPSS
Sbjct: 1  MGRSLKLQLNQFADMFDDEFSSIHSSNITYYKNLHAKTIKAAGSRVGGFMYERAKEIPSS 60

[Close]
BLAST of MELO3C035481.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TM64 (Ervatamin-B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003430 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.55e-20
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1   MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKIGGGRVGGFMYEHTKKIPSSI 58
           MG SLKL+L+QFAD+ DDEFSSIH  NITYYKNLHAK G   VGGFMYEH K+IPSSI
Sbjct: 78  MGRSLKLQLNQFADMSDDEFSSIHGSNITYYKNLHAKTG--HVGGFMYEHAKEIPSSI 133

[Close]
BLAST of MELO3C035481.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BYQ3 (ervatamin-B-like OS=Cucumis melo OX=3656 GN=LOC103494879 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.55e-20
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1   MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKIGGGRVGGFMYEHTKKIPSSI 58
           MG SLKL+L+QFAD+ DDEFSSIH  NITYYKNLHAK G   VGGFMYEH K+IPSSI
Sbjct: 78  MGRSLKLQLNQFADMSDDEFSSIHGSNITYYKNLHAKTG--HVGGFMYEHAKEIPSSI 133

[Close]
BLAST of MELO3C035481.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VMC5 (Vignain-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00530 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.74e-20
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0 

Query: 1   MGSSLKLRLSQFADICDDEFSSIHSFNITYYKNLHAKI---GGGRVGGFMYEHTKKIPSS 58
           MG SLKL+L+QFAD+ DDEFSSIHS NITYYKNLHAK     G RVGGFMYE  K+IPSS
Sbjct: 77  MGRSLKLQLNQFADMFDDEFSSIHSSNITYYKNLHAKTIKAAGSRVGGFMYERAKEIPSS 136

The following BLAST results are available for this feature:
BLAST of MELO3C035481.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450470.11.38e-2077.59PREDICTED: ervatamin-B-like [Cucumis melo][more]
TYK30206.11.79e-2075.41vignain-like [Cucumis melo var. makuwa][more]
KAA0044593.15.26e-2077.59ervatamin-B-like [Cucumis melo var. makuwa][more]
XP_008454483.15.26e-2077.59PREDICTED: ervatamin-B-like [Cucumis melo][more]
KAA0066925.15.66e-2075.41vignain-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C035481.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035481.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BQB26.70e-2177.59ervatamin-B-like OS=Cucumis melo OX=3656 GN=LOC103492063 PE=3 SV=1[more]
A0A5D3E2U68.67e-2175.41Vignain-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00200 P... [more]
A0A5A7TM642.55e-2077.59Ervatamin-B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G0034... [more]
A0A1S3BYQ32.55e-2077.59ervatamin-B-like OS=Cucumis melo OX=3656 GN=LOC103494879 PE=3 SV=1[more]
A0A5A7VMC52.74e-2075.41Vignain-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00530 P... [more]
BLAST of MELO3C035481.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035481.jh1.t1MELO3C035481.jh1.t1mRNA