MELO3C035433 (gene) Melon (DHL92) v4

Overview
NameMELO3C035433
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Locationchr12: 13349174 .. 13349843 (-)
RNA-Seq ExpressionMELO3C035433
SyntenyMELO3C035433
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGTGTTGACTATCCTGCAGTTATGGTAGCCTCTGTAGTTTGAATTCATGAGAGTAAGTTATGGATGTGAGAGAGGGAGAGAGATATGTTTCTAATCAAACCTATTTTTGTTTTAGAGACTTAAATGATGGACAAGGGTTGGATGAAAATTAGAAATAAGTTCTCCCTTGAGTATAGACAGGGAGTGCCCCAATTTTTAGAATTTGCCAAATTTCACGTTGATGCTTACGGACGATTAACGTGTCCATGAAAGAGATGTTTGAATCTAAATTGGAGCTCATTAGAGGGTGTAGAACGACATCTATTGACTATTAGAATATCCTCCTGCTACACAGAATTGGTGTATCATGGAGAGTCATTAAGCTTTAAAGGTACATAAAACTTCGAGGAAGGAACTAGCAGTAATAATCCTTTTGATGAAGGAACTAGTAGTAGGTAATTTAATGAAGAATATGATATGTTTGGTATACTAAATGATACAAGCCCCGATTGAACAGAAAGAGAAATTAGAGGAACATCGTTTGAAAGATGAAATGCCAATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATGAAGCACGCAATGAGTTCTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTGA

mRNA sequence

GTTGTGTTGACTATCCTGCAGTTATGAGACTTAAATGATGGACAAGGGTTGGATGAAAATTAGAAATAAGTTCTCCCTTGAGTATAGACAGGGAGTGCCCCAATTTTTAGAATTTGCCAAATTTCACGTTGATGCTTACGGACGATTAACGTGTCCATGAAAGAGATGTTTGAATCTAAATTGGAGCTCATTAGAGGGTGTAGAACGACATCTATTGACTATTAGAATATCCTCCTGCTACACAGAATTGGTGTATCATGGAGAGTCATTAAGCTTTAAAGGTACATAAAACTTCGAGGAAGGAACTAGCAGTAATAATCCTTTTGATGAAGGAACTAGTAGTAGGTAATTTAATGAAGAATATGATATGTTTGGTATACTAAATGATACAAGCCCCGATTGAACAGAAAGAGAAATTAGAGGAACATCGTTTGAAAGATGAAATGCCAATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATGAAGCACGCAATGAGTTCTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTGA

Coding sequence (CDS)

ATGATACAAGCCCCGATTGAACAGAAAGAGAAATTAGAGGAACATCGTTTGAAAGATGAAATGCCAATGAATGTTGGGGTAGATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATGAAGCACGCAATGAGTTCTACCCCGGTTGTTCTGAATTTTCGTCGTTGAATTTTTTGGTTAAGTTG

Protein sequence

MIQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNFLVKL
Homology
[Close]
BLAST of MELO3C035433 vs. NCBI nr
Match: KAA0035646.1 (uncharacterized protein E6C27_scaffold285G003370 [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 7.7e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MIQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLN 60
          MIQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLN
Sbjct: 1  MIQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLN 60

Query: 61 FLVKL 66
          FLVKL
Sbjct: 61 FLVKL 65

[Close]
BLAST of MELO3C035433 vs. NCBI nr
Match: KAA0064176.1 (CACTA transposable element [Cucumis melo var. makuwa] >TYK02853.1 CACTA transposable element [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 3.1e-21
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 2  IQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNF 61
          +QAPIE +E+ EE RL+DEMPMNVGVDIDEDRTNNIF DLLNE RNE YPGCSEFSSLNF
Sbjct: 5  LQAPIEHEEETEELRLEDEMPMNVGVDIDEDRTNNIFYDLLNEERNELYPGCSEFSSLNF 64

Query: 62 LVKL 66
          LVKL
Sbjct: 65 LVKL 68

[Close]
BLAST of MELO3C035433 vs. NCBI nr
Match: TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 2   IQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNF 61
           +QAPIE +E++EE RL+DEM MNVGV+IDED TNNIFQDLLN+ARNE YPGCSEFSSLNF
Sbjct: 191 LQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 250

Query: 62  LVKL 66
           LVKL
Sbjct: 251 LVKL 254

[Close]
BLAST of MELO3C035433 vs. NCBI nr
Match: KAA0032061.1 (uncharacterized protein E6C27_scaffold223G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 2  IQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNF 61
          +QAPIE +E++EE RL+DEM MNVGV+IDED TNNIFQDLLN+ARNE YPGCSEFSSLNF
Sbjct: 5  LQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 64

Query: 62 LVKL 66
          LVKL
Sbjct: 65 LVKL 68

[Close]
BLAST of MELO3C035433 vs. NCBI nr
Match: KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 2   IQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNF 61
           +QAPIE +E++EE RL+DEM MNVGV+IDED TNNIFQDLLN+ARNE YPGCSEFSSLNF
Sbjct: 117 LQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 176

Query: 62  LVKL 66
           LVKL
Sbjct: 177 LVKL 180

[Close]
BLAST of MELO3C035433 vs. ExPASy TrEMBL
Match: A0A5A7T0C5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G003370 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MIQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLN 60
          MIQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLN
Sbjct: 1  MIQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLN 60

Query: 61 FLVKL 66
          FLVKL
Sbjct: 61 FLVKL 65

[Close]
BLAST of MELO3C035433 vs. ExPASy TrEMBL
Match: A0A5D3BT53 (CACTA transposable element OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00550 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-21
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 2  IQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNF 61
          +QAPIE +E+ EE RL+DEMPMNVGVDIDEDRTNNIF DLLNE RNE YPGCSEFSSLNF
Sbjct: 5  LQAPIEHEEETEELRLEDEMPMNVGVDIDEDRTNNIFYDLLNEERNELYPGCSEFSSLNF 64

Query: 62 LVKL 66
          LVKL
Sbjct: 65 LVKL 68

[Close]
BLAST of MELO3C035433 vs. ExPASy TrEMBL
Match: A0A5D3D5X7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00580 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.6e-21
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 2   IQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNF 61
           +QAPIE +E++EE RL+DEM MNVGV+IDED TNNIFQDLLN+ARNE YPGCSEFSSLNF
Sbjct: 191 LQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 250

Query: 62  LVKL 66
           LVKL
Sbjct: 251 LVKL 254

[Close]
BLAST of MELO3C035433 vs. ExPASy TrEMBL
Match: A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.6e-21
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 2   IQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNF 61
           +QAPIE +E++EE RL+DEM MNVGV+IDED TNNIFQDLLN+ARNE YPGCSEFSSLNF
Sbjct: 117 LQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 176

Query: 62  LVKL 66
           LVKL
Sbjct: 177 LVKL 180

[Close]
BLAST of MELO3C035433 vs. ExPASy TrEMBL
Match: A0A5A7SR78 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00250 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.6e-21
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 2  IQAPIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNF 61
          +QAPIE +E++EE RL+DEM MNVGV+IDED TNNIFQDLLN+ARNE YPGCSEFSSLNF
Sbjct: 5  LQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNF 64

Query: 62 LVKL 66
          LVKL
Sbjct: 65 LVKL 68

The following BLAST results are available for this feature:
BLAST of MELO3C035433 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035433 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035646.17.7e-28100.00uncharacterized protein E6C27_scaffold285G003370 [Cucumis melo var. makuwa][more]
KAA0064176.13.1e-2184.38CACTA transposable element [Cucumis melo var. makuwa] >TYK02853.1 CACTA transpos... [more]
TYK18968.11.6e-2081.25uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa][more]
KAA0032061.11.6e-2081.25uncharacterized protein E6C27_scaffold223G00250 [Cucumis melo var. makuwa][more]
KAA0056368.11.6e-2081.25uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa][more]
BLAST of MELO3C035433 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T0C53.7e-28100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BT531.5e-2184.38CACTA transposable element OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A5D3D5X77.6e-2181.25Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7UMP47.6e-2181.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SR787.6e-2181.25DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of MELO3C035433 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035433.1MELO3C035433.1mRNA