MELO3C035414 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035414
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein strawberry notch 1
Location	chr12: 11948764 .. 11954343 (+)
RNA-Seq Expression	MELO3C035414
Synteny	MELO3C035414

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTGTCTTTCCTTCTTCCGCAAAATCGTCAAACTTCAAGGTCGAAAAATCCCTAACTTTCCTCTTAATTCCCTTCGAAAATCAAGATCATCGTCCGCTTCCCTTCTTCCGCGCGTCTTCTTGTTCGCAAAATCGAAGCACCCAAAATCGTTCTTCCGTTCAAAAACCCAAGATCATCTGTGTTCAAAAAGTAGACGTCCCTTGCATTTTCGCTGTCCGTTGTCCACTGTACAAGTCTATACCATCGTTCGAAAAGAAGAAGACAGAAAACTTCAAGTTTCTTCACCGAAAATCTCAGTTCTTTGGCCGAGTAGAACAATGTATTTGTGATGTCAAACAAGAAGTCAAAGTATCCGGATCTTCAAGTAGATTTGAGGTTAGATTTTATCTTTCTCATTTTGAATTTGTTGCACTTAAAATTTTATGACAAAGTTGTTTAGATATGTTTCATCCTCCATTTATCCCATTCTTGCAAATTTATCTCAAACTTGGTAGTGGTTATTGTTTCTGCCGCAACTGGAGGAATTATCTTTTCTTATTTAGAGCAACCTGTTAGTACCGGAATATTTTTCTATTACTTCATTGTCTTCTGTCTACAACGCAATATAACAAACTTATTGGTATTCTTTTGCTCGTCTTGGAGATTTTGAATCTTGGGACATTTTTCTTCCTTCCTATAAATCAATTGAAGTTTATTTCTGGTTCAAAAAGTTTGCTGACCGAGAGTTTTCTTTTAACTTCTAGGGGTATGTATTTGTGTCGCACACTTAGCTACCGAGGAGCAGAATTTAACATTGTGGAAGCACCGTTGGAAGCTGAGATGATGGTATAGTGTATTGGTTCCTCTAATTTTAGTAAGGAGAAGTTGAACTCAATTTTTTCTGTTTAACACGCGCCTAAATATTTGTATTATGAAAATGAAATATAACTATTACATGAAGTTAACCTGACCGTCTTCTCTGTTAGATAGGAATCCAATGATTCCAACGCTTGCTATCTCTTTTTCTTTACAAATGTGATTAATTATCATTCTTTTATGCAGTTTACTATGGTCTCTTGAAACTCTGTGGTTCTATATCCTACTTAGGAAATGTATGCATTAACTGCTGAATTTTGGGCAAAGCTGCAATTAGAATGGATGACAACAAGTGCTTATGTTACTAGTTACAAGCCTAGCACCAATCAACTTTGGCGATTATTTTGGGCAAGTCATCAGGTATATATATTTGGGATTTTTCTTAAAAGTTGAGTTTCTCTTTAAGTTGGACTTTTAAATATTTATTTATTTTAATTTAATTGAAGTGTGTTACAAAGGTTTATATGTTCTATACCATTTCTCTTACTTCAAAACTTCGTCCTTTTGTAATGTCTCTTCAGGCATATCTGTATGTCTGCAAAGGTTCCTGCTAGTGTTAGACTAGCTAGCTAAGCAATCATTATTGGAAGATAAATGTGTATTATTGAGATTGAAAATCCTAACTTGGTCAAGCTAAAAACCTTGAAGCTAGAGATATTGATGTAAGCTAATATTCATCCTTACACACGGTTTTACAATTCGAACATTGATATACAGTTGATGTGTGTAATTTCGCTTCATGTTACAGATCGGGAAAACAACTGAACTTTCAAGGCGTGAATGGTTGTTATAAGTTCTATATTGTTTGTTTTAACAGATATTCAACATTTATTCAATTTCTATGATTATTGTTCTAGAAACAAATATGCCATTGTATAGATTTAGGGATGCTTTTCTTACAGTTTACGAACTTGTATTTATTCTTTTTACCAGGGAAGAGATAGAGAAACAAAAGGCTCACGAGCAATTCATGAGGCTCCAAAAACAAGGAAAAACTGAACAAGCTAGGAAAGATTTAGGTAATCCTTTTTCAATGATCAATTGTTTAAGTGTATCTTTTATGTTTATGAGAATGCAATCTTTTTATGATTTTTCTGTCATCCAAGAATGAAATTCTTTTCAATTTTTCTCTAAAATTTTTTAGCCTATCTTTTGTTTAGGAAAGATAACGGTTCTGTGCAAATGTTACTAAATTTTAGTAGTTGGCTCCAAAGTTGATGCAATTTGTATGAACTGTTGATCTAGATTAATAGTTTTATGGAGTGGAGATGAATATTTTGGTTTTCATAAATTGTAATCAAATATAGGTAGTTGCTTTTGACCTTTATATAAAGTTTCATAAAATTTCAAGAATGTCACTCCTCCAGAGAAGTTAAAGTTCGTCCAATGGCTTATTATTATTTAAGCGACCTCCCACAACGTTGTACATCTATTTTGTATGATTCATATAGGACATACGATGAACTATGATACCTTAGAGGAACTATGCATATAAAATTTTTTGTAGATATTTGAGCTTCAATAATTTAAAGGGAAAAATTCTAAGGGAGCTTGGTAGTCTTCTAGAGCTTCAATACCTACATCTACAACAAAATTGTTTCATTGGACGAATTCCTCCTGAATTGGGCACCCTGCAACATCTTCGCCACTTGTAAATTTTACTTACTTTCTTATATTGTTGACAAAACTCATATTTAGTTATATACCTAATATCAATTTGATAACTGTGATTGCTCAATACTTATGAATTGTTATATAGTATATTGCTCTTCTGTTATTACTCTTCGAATATATACCATTTAGAAAATTGTATATTGCCTTAATCTTGCTTCCTTCCATGTTGTACCGACATGTGCATGTTCGTGAGACCCCACTATATTATTGTGATTTTATCTACTTCTTGTAGATTGGCTCTACTGTTGATGATACTTATTTTAGCTCATGAATTGGAGATAGAGGATGCGTAATGCAAGTTTATTTGAAGCCAAGTTTCTGTTTCTTCTTCCTTTTGTAAATGCTTCTAAGCATTGTGCCACTGTTTGTCGCTCATGCATGTTTGAGTTGTGAATTATATTCTACTCATGTTAATTTTTTGTATGAGATTATTTGTGATATGTTGGGTCTTTGTCTGAGAGCTTAGCTATCGCTTGAGCAGCAAAGACTAACCAATATTATTTTCCTTCACTCTGAATATGTGTAGATATTTTATATTATTCATGGTCGCCTGCGATGACTATAAGTTCTATCTGTATCATCATTCTCTCCATGCTATCGAGTTCCACAACAAAGGTACGATTCACTTCCTTCCATTTTGATTCTAAATGTATAGAGTTAATACATTGTTATGGAGGTGCTGGAAGTAGCAAAATTCTTACATTCTTTGAAATTGTTAAGATTCAAGTAACGTGTGTCCCTCTCTTGATGGCCGCTTGCTTTTCTGTGGTTGGAGCTTGTTTGGCTAATTGATTGATGGGCAGGTGTTCAAGTGCATCATACTAATCCCCGTATCATGTCATTTTAGTTTTGATTACCTTTTATTTTAATTCCACGCACAGAGGTTAGAGTTTGTTGAAAACAATTTTTCATGAAAATTTTCATTCTTACTACATTTAGATGTTCTTTTACTTGTTTTAGCTTGTACCCCTTTTTTGAACTCCTTGATGACTGCAAAAGCAATATAGTTGTAAACATAAGATACCCAAAAATCAACTCAGTTTCCTTTATTCCCTGCTCTCCCTCCTGTGTCTCTTTCAATTTGTTCTATGTTATAAATTGTGTGATTTAACTACCACTTTTGTTCTTTTAAATATTATTTACGAATTATGACACTTTGATTTGAGTAATATGTCTTTTACATGGAATATATTTACATACACGTGTTAACACACCATGGCACTCCGATACATATTAACACACATATTTAAGTGACACTAATCTCTGAGATAAGTTGACAATTATGTTAAGTGACCTTGTCGAAGTTCTATCATTATCCTCAAGTAGTACAAGGATTTATCCTTTTACAATTCTAAAGTATGTTGATTGGTTTGTTTGAATTGTGAGCTAATTCATTTATTTTGCATGTTTATAGGTTGATACACAAAGATCATACTCACAGGCCGAGTTAGACAAGATGCAGGTTGAGTTAGCTGACTTTCTGGGTTTGTACGTATGATTTCGACTTATTTGGGATTCTGAAGTAGGAAATTTTTTTTGTGGTTGTCATACTTAAACTTTATGTATATAGATAATATAGATGAATTGTTTGAATTATTCATATGGAGGTGGGTGGAGTTGATGGGTACAATTAAGAACACTACCATATTGTTTATTGGTGGGCTAAGTTAGTTCATTAGAGGATGTTGAGTTGAATTCTTGGCAATCTGATGGAATTATTTATTTTGGGCTTGTAAATGATCTACAATATTCATGTATGTATAGTTTTGGAAATGATATGGTGAAAGGTTTTATTTATATATGTTTGAGATTTGAAACTATATTTAATGAATATTGTCATTTATATGTATTTATGGAACAATTGTTGCACTACTATATAGGACCAATGAGAGCATAATACAGAAACAAAAATATAATTGAATTATAATTTAAAAAAAAAATCGAAAAATGCTTGACGGTTTTAAAATGTCATAAACAAGTGCATTCTTGATGGTTTTTCAATGTCATAAACAACCACTTTCTTGACGGTTTTTAAATGTCATGAAAACTCATACTCTTGACGGTTATCAAATGTCATAAATATTCTTATTCTTGACGATTTTTGTCATGGATACTCATATTCTTGACGGTTCTAAACTGTCATGAACATATGTACTATTGACGGTTTTAAACTGTCATGAAAATTTATATACTTTACGGTTTAAAACTGTCAACATTTACTAACTTTGACAGTCTTGACACTGGCTTTAATGACGATTTTAAAACCGTCAAGAATAATGATTCTTGATAGTTTAAAACTGTCAAGAGAGTCTATTTTTGTACTAGTGGATATGCATGCTTAATTGGGTAGTTGACAACCACCCAGAATGGAAGGACCTTGCAGAGAGGGCCTTTGACAATGAACAGGTTTATTGACATAACTGTATATTATATAATTACTGTGAATATTATATAGATATACGTACATTTAGTAGAAACTGATTTTTCCATGTCATTTTTGCGACAGTTTCAATTCAAGGTCATGTTTCCTGACGAAGATTTTGTAGAACGAAGCACGTTCTATAAAAGGCAAAGTACAGAGGAAACTCAAAAAAGATTTGAGAAAGGAGAATGCTCATGACAAGCTGAGCATACAAATGTGGAAGTTCCTAAATACTTCCTAAAATTTCAAGAATTAATTATGGCTAGCAATGAAGCTTTGAACGTGAAAATGGACAAACTGCTTCTAGAGGTCAAAGGACTCAAAAAACTGTTGAAAGAGAAAGAAAGTGCAACAGTGGAACAAACTAAAAACATACAGAGGGATGACAATGATGTGATGGAGGTCACAGTCTGAGAAATAATAGTGAAGAAAGTGGAACAGGAGATAAAGATAGGAAAAAAGGATACTATGTATTTTACACATATACATATTTGTGATTATACTTCTATTCATGACTGTATATTTTACATACTCACTTTAATGATGATCAGGATAGAAAAAATGCAAATGAAAATGAAGAACATTAGGTAGATTATCAATTGAAGTTTATGTGATAATACTTTGATAA

mRNA sequence

AAGTGTCTTTCCTTCTTCCGCAAAATCGTCAAACTTCAAGGTCGAAAAATCCCTAACTTTCCTCTTAATTCCCTTCGAAAATCAAGATCATCGTCCGCTTCCCTTCTTCCGCGCGTCTTCTTGTTCGCAAAATCGAAGCACCCAAAATCGTTCTTCCGTTCAAAAACCCAAGATCATCTGTGTTCAAAAAGTAGACGTCCCTTGCATTTTCGCTGTCCGTTGTCCACTGTACAAGTCTATACCATCGTTCGAAAAGAAGAAGACAGAAAACTTCAAGTTTCTTCACCGAAAATCTCAGTTCTTTGGCCGAGTAGAACAATGTATTTGTGATGTCAAACAAGAAGTCAAAGTATCCGGATCTTCAAGTAGATTTGAGGGGTATGTATTTGTGTCGCACACTTAGCTACCGAGGAGCAGAATTTAACATTGTGGAAGCACCGTTGGAAGCTGAGATGATGGAAATGTATGCATTAACTGCTGAATTTTGGGCAAAGCTGCAATTAGAATGGATGACAACAAGTGCTTATGTTACTAGTTACAAGCCTAGCACCAATCAACTTTGGCGATTATTTTGGGCAAGTCATCAGGTATATATATTTGGGATTTTTCTTAAAAGGGAAGAGATAGAGAAACAAAAGGCTCACGAGCAATTCATGAGGCTCCAAAAACAAGGAAAAACTGAACAAGCTAGGAAAGATTTAGATATTTTATATTATTCATGGTCGCCTGCGATGACTATAAGTTCTATCTGTATCATCATTCTCTCCATGCTATCGAGTTCCACAACAAAGAATAATGATTCTTGATAGTTTAAAACTGTCAAGAGAGTCTATTTTTGTACTAGTGGATATGCATGCTTAATTGGGTAGTTGACAACCACCCAGAATGGAAGGACCTTGCAGAGAGGGCCTTTGACAATGAACAGTTTCAATTCAAGGTCATGTTTCCTGACGAAGATTTTGTAGAACGAAGCACGTTCTATAAAAGGCAAAGTACAGAGGAAACTCAAAAAAGATTTGAGAAAGGAGAATGCTCATGACAAGCTGAGCATACAAATGTGGAAGTTCCTAAATACTTCCTAAAATTTCAAGAATTAATTATGGCTAGCAATGAAGCTTTGAACGTGAAAATGGACAAACTGCTTCTAGAGGTCAAAGGACTCAAAAAACTGTTGAAAGAGAAAGAAAGTGCAACAGTGGAACAAACTAAAAACATACAGAGGGATGACAATGATGTGATGGAGGTCACAGTCTGAGAAATAATAGTGAAGAAAGTGGAACAGGAGATAAAGATAGGAAAAAAGGATACTATGTATTTTACACATATACATATTTGTGATTATACTTCTATTCATGACTGTATATTTTACATACTCACTTTAATGATGATCAGGATAGAAAAAATGCAAATGAAAATGAAGAACATTAGGTAGATTATCAATTGAAGTTTATGTGATAATACTTTGATAA

Coding sequence (CDS)

ATGTCAAACAAGAAGTCAAAGTATCCGGATCTTCAAGTAGATTTGAGGGGTATGTATTTGTGTCGCACACTTAGCTACCGAGGAGCAGAATTTAACATTGTGGAAGCACCGTTGGAAGCTGAGATGATGGAAATGTATGCATTAACTGCTGAATTTTGGGCAAAGCTGCAATTAGAATGGATGACAACAAGTGCTTATGTTACTAGTTACAAGCCTAGCACCAATCAACTTTGGCGATTATTTTGGGCAAGTCATCAGGTATATATATTTGGGATTTTTCTTAAAAGGGAAGAGATAGAGAAACAAAAGGCTCACGAGCAATTCATGAGGCTCCAAAAACAAGGAAAAACTGAACAAGCTAGGAAAGATTTAGATATTTTATATTATTCATGGTCGCCTGCGATGACTATAAGTTCTATCTGTATCATCATTCTCTCCATGCTATCGAGTTCCACAACAAAGAATAATGATTCTTGA

Protein sequence

MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQARKDLDILYYSWSPAMTISSICIIILSMLSSSTTKNNDS

Homology

[Close]

BLAST of MELO3C035414 vs. ExPASy Swiss-Prot
Match: F4IF36 (Protein FORGETTER 1 OS=Arabidopsis thaliana OX=3702 GN=FGT1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-20
Identity = 44/76 (57.89%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMY+CRTLSY+GAEF IVEA LEA M  MY  +AEFWA+L++E ++ SA++ + 
Sbjct: 477 MDMKARGMYVCRTLSYKGAEFEIVEARLEAGMEAMYNKSAEFWAELRIELLSASAFLPNE 536

Query: 71  KPSTNQLWRLFWASHQ 87
           KP+++QLWRL+W+SHQ
Sbjct: 537 KPNSSQLWRLYWSSHQ 552

[Close]

BLAST of MELO3C035414 vs. ExPASy Swiss-Prot
Match: A8JUV0 (Protein strawberry notch OS=Drosophila melanogaster OX=7227 GN=sno PE=1 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 24/76 (31.58%), Postives = 40/76 (52.63%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + + LRGMY+ R LS++G  F I E PL  E  ++Y  + E W +   ++   +  + + 
Sbjct: 714 MDMKLRGMYIARQLSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEAMQKFTEAAELIDAE 773

Query: 71  KPSTNQLWRLFWASHQ 87
                 +W  FW+SHQ
Sbjct: 774 SRMKKTMWGQFWSSHQ 789

[Close]

BLAST of MELO3C035414 vs. ExPASy Swiss-Prot
Match: O01737 (Protein strawberry notch homolog OS=Caenorhabditis elegans OX=6239 GN=let-765 PE=1 SV=3)

HSP 1 Score: 52.0 bits (123), Expect = 7.2e-06
Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 16  RGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSYKPST- 75
           RG+YL R LS+RG  F + E  L +E ++MY    + W + + ++ T    +   + ST 
Sbjct: 904 RGLYLARQLSFRGVSFAVQEVQLSSEFVKMYDAAVKLWMEARRQFQTVIETMDEEERSTC 963

Query: 76  NQLWRLFWASHQ 87
             +W  FWA HQ
Sbjct: 964 KTVWGQFWACHQ 975

[Close]

BLAST of MELO3C035414 vs. ExPASy Swiss-Prot
Match: Q9FWT2 (Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=UBC16 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 124 LDILYYSWSPAMTISSICIIILSMLSSSTTK 155
           LDILY SWSPAMT+SSICI ILSMLSSST K
Sbjct: 100 LDILYDSWSPAMTVSSICISILSMLSSSTEK 130

[Close]

BLAST of MELO3C035414 vs. ExPASy Swiss-Prot
Match: Q5F371 (Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 GN=SBNO1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-05
Identity = 22/76 (28.95%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + + LRGMY+ R LS+ G  F I E  L  E ++MY  + + W   +  +   +  + + 
Sbjct: 520 MDMKLRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAE 579

Query: 71  KPSTNQLWRLFWASHQ 87
           +     +W  FW++HQ
Sbjct: 580 QRMKKSMWGQFWSAHQ 595

[Close]

BLAST of MELO3C035414 vs. NCBI nr
Match: XP_016902613.1 (PREDICTED: uncharacterized protein LOC103499968 isoform X1 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 3.6e-79
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60
           MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW
Sbjct: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60

Query: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA 120
           MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA
Sbjct: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA 120

Query: 121 RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 155
           RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK
Sbjct: 121 RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 154

[Close]

BLAST of MELO3C035414 vs. NCBI nr
Match: XP_008461368.1 (PREDICTED: uncharacterized protein LOC103499968 isoform X2 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 3.6e-79
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60
           MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW
Sbjct: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60

Query: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA 120
           MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA
Sbjct: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA 120

Query: 121 RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 155
           RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK
Sbjct: 121 RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 154

[Close]

BLAST of MELO3C035414 vs. NCBI nr
Match: XP_031742749.1 (protein FORGETTER 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-27
Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS 
Sbjct: 303 MDMKARGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSD 362

Query: 71  KPSTNQLWRLFWASHQ 87
           KPSTNQLWRLFWASHQ
Sbjct: 363 KPSTNQLWRLFWASHQ 378

[Close]

BLAST of MELO3C035414 vs. NCBI nr
Match: XP_008456277.2 (PREDICTED: protein strawberry notch [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-27
Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS 
Sbjct: 452 MDMKARGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSD 511

Query: 71  KPSTNQLWRLFWASHQ 87
           KPSTNQLWRLFWASHQ
Sbjct: 512 KPSTNQLWRLFWASHQ 527

[Close]

BLAST of MELO3C035414 vs. NCBI nr
Match: XP_004139916.1 (protein FORGETTER 1 isoform X1 [Cucumis sativus] >KGN46784.1 hypothetical protein Csa_020930 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-27
Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS 
Sbjct: 452 MDMKARGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSD 511

Query: 71  KPSTNQLWRLFWASHQ 87
           KPSTNQLWRLFWASHQ
Sbjct: 512 KPSTNQLWRLFWASHQ 527

[Close]

BLAST of MELO3C035414 vs. ExPASy TrEMBL
Match: A0A1S4E317 (uncharacterized protein LOC103499968 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499968 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60
           MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW
Sbjct: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60

Query: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA 120
           MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA
Sbjct: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA 120

Query: 121 RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 155
           RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK
Sbjct: 121 RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 154

[Close]

BLAST of MELO3C035414 vs. ExPASy TrEMBL
Match: A0A1S3CE76 (uncharacterized protein LOC103499968 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499968 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60
           MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW
Sbjct: 1   MSNKKSKYPDLQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEW 60

Query: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA 120
           MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA
Sbjct: 61  MTTSAYVTSYKPSTNQLWRLFWASHQVYIFGIFLKREEIEKQKAHEQFMRLQKQGKTEQA 120

Query: 121 RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 155
           RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK
Sbjct: 121 RKDLDILYYSWSPAMTISSICIIILSMLSSSTTK 154

[Close]

BLAST of MELO3C035414 vs. ExPASy TrEMBL
Match: A0A0A0KD57 (PHD-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G135400 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 9.1e-28
Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS 
Sbjct: 452 MDMKARGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSD 511

Query: 71  KPSTNQLWRLFWASHQ 87
           KPSTNQLWRLFWASHQ
Sbjct: 512 KPSTNQLWRLFWASHQ 527

[Close]

BLAST of MELO3C035414 vs. ExPASy TrEMBL
Match: A0A1S3C445 (protein strawberry notch OS=Cucumis melo OX=3656 GN=LOC103496271 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 9.1e-28
Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS 
Sbjct: 452 MDMKARGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSD 511

Query: 71  KPSTNQLWRLFWASHQ 87
           KPSTNQLWRLFWASHQ
Sbjct: 512 KPSTNQLWRLFWASHQ 527

[Close]

BLAST of MELO3C035414 vs. ExPASy TrEMBL
Match: A0A5A7UME3 (Protein strawberry notch OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005490 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 64/71 (90.14%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 16  RGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSYKPSTN 75
           RGMYLCRTLSYRGAEF+IVEAPLEAEMMEMY L AEFWAKL+LE MT SAYVTS KPSTN
Sbjct: 456 RGMYLCRTLSYRGAEFDIVEAPLEAEMMEMYTLAAEFWAKLRLELMTASAYVTSDKPSTN 515

Query: 76  QLWRLFWASHQ 87
           QLWRLFWASHQ
Sbjct: 516 QLWRLFWASHQ 526

[Close]

BLAST of MELO3C035414 vs. TAIR 10
Match: AT1G79350.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 3.7e-21
Identity = 44/76 (57.89%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 11  LQVDLRGMYLCRTLSYRGAEFNIVEAPLEAEMMEMYALTAEFWAKLQLEWMTTSAYVTSY 70
           + +  RGMY+CRTLSY+GAEF IVEA LEA M  MY  +AEFWA+L++E ++ SA++ + 
Sbjct: 477 MDMKARGMYVCRTLSYKGAEFEIVEARLEAGMEAMYNKSAEFWAELRIELLSASAFLPNE 536

Query: 71  KPSTNQLWRLFWASHQ 87
           KP+++QLWRL+W+SHQ
Sbjct: 537 KPNSSQLWRLYWSSHQ 552

[Close]

BLAST of MELO3C035414 vs. TAIR 10
Match: AT5G46020.1 (CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 7.9e-08
Identity = 26/33 (78.79%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 95  KREEIEKQKAHEQFMRLQKQGKTEQARKDLDIL 128
           +REE+EKQ+AHE++MRLQ+QGKTEQARKDLD L
Sbjct: 102 EREELEKQRAHERYMRLQEQGKTEQARKDLDRL 134

[Close]

BLAST of MELO3C035414 vs. TAIR 10
Match: AT1G75440.1 (ubiquitin-conjugating enzyme 16 )

HSP 1 Score: 51.2 bits (121), Expect = 8.7e-07
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 124 LDILYYSWSPAMTISSICIIILSMLSSSTTK 155
           LDILY SWSPAMT+SSICI ILSMLSSST K
Sbjct: 100 LDILYDSWSPAMTVSSICISILSMLSSSTEK 130

[Close]

BLAST of MELO3C035414 vs. TAIR 10
Match: AT5G42990.1 (ubiquitin-conjugating enzyme 18 )

HSP 1 Score: 48.5 bits (114), Expect = 5.7e-06
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 124 LDILYYSWSPAMTISSICIIILSMLSSSTTK 155
           LDILY SWSPAMT+SS+CI ILSMLSSS  K
Sbjct: 100 LDILYDSWSPAMTVSSVCISILSMLSSSPEK 130

[Close]

BLAST of MELO3C035414 vs. TAIR 10
Match: AT1G45050.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 47.8 bits (112), Expect = 9.7e-06
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 124 LDILYYSWSPAMTISSICIIILSMLSSSTTK 155
           LDILY SWSPAMT++S+CI ILSMLSSS  K
Sbjct: 100 LDILYDSWSPAMTVNSVCISILSMLSSSPAK 130

The following BLAST results are available for this feature:

BLAST of MELO3C035414 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IF36	5.1e-20	57.89	Protein FORGETTER 1 OS=Arabidopsis thaliana OX=3702 GN=FGT1 PE=1 SV=1	[more]
A8JUV0	2.2e-07	31.58	Protein strawberry notch OS=Drosophila melanogaster OX=7227 GN=sno PE=1 SV=2	[more]
O01737	7.2e-06	34.72	Protein strawberry notch homolog OS=Caenorhabditis elegans OX=6239 GN=let-765 PE...	[more]
Q9FWT2	1.2e-05	87.10	Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=U...	[more]
Q5F371	2.1e-05	28.95	Protein strawberry notch homolog 1 OS=Gallus gallus OX=9031 GN=SBNO1 PE=2 SV=1	[more]

BLAST of MELO3C035414 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902613.1	3.6e-79	100.00	PREDICTED: uncharacterized protein LOC103499968 isoform X1 [Cucumis melo]	[more]
XP_008461368.1	3.6e-79	100.00	PREDICTED: uncharacterized protein LOC103499968 isoform X2 [Cucumis melo]	[more]
XP_031742749.1	1.9e-27	84.21	protein FORGETTER 1 isoform X2 [Cucumis sativus]	[more]
XP_008456277.2	1.9e-27	84.21	PREDICTED: protein strawberry notch [Cucumis melo]	[more]
XP_004139916.1	1.9e-27	84.21	protein FORGETTER 1 isoform X1 [Cucumis sativus] >KGN46784.1 hypothetical protei...	[more]

BLAST of MELO3C035414 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E317	1.7e-79	100.00	uncharacterized protein LOC103499968 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CE76	1.7e-79	100.00	uncharacterized protein LOC103499968 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KD57	9.1e-28	84.21	PHD-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G135400 PE...	[more]
A0A1S3C445	9.1e-28	84.21	protein strawberry notch OS=Cucumis melo OX=3656 GN=LOC103496271 PE=3 SV=1	[more]
A0A5A7UME3	1.2e-27	90.14	Protein strawberry notch OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of MELO3C035414 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79350.1	3.7e-21	57.89	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G46020.1	7.9e-08	78.79	CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterP...	[more]
AT1G75440.1	8.7e-07	87.10	ubiquitin-conjugating enzyme 16	[more]
AT5G42990.1	5.7e-06	80.65	ubiquitin-conjugating enzyme 18	[more]
AT1G45050.1	9.7e-06	77.42	Ubiquitin-conjugating enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR12706:SF13	PROTEIN STRAWBERRY NOTCH	coord: 14..88
IPR019380	Casein kinase substrate, phosphoprotein PP28	PFAM	PF10252	PP28	coord: 96..127 e-value: 6.0E-9 score: 36.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 96..158 e-value: 2.1E-5 score: 26.1
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 123..152
IPR039187	Strawberry notch, AAA domain	PFAM	PF13872	AAA_34	coord: 14..46 e-value: 7.8E-7 score: 28.3
IPR026741	Protein strawberry notch	PANTHER	PTHR12706	STRAWBERRY NOTCH-RELATED	coord: 14..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035414.1	MELO3C035414.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated