MELO3C035409.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAGAATATATTGATGCTATTACGTAATTATTGTGTAGGATGGAATGATAACATTAAAAAGCACTTCATCACAAGAAGGGAGTGAACCTCTTCTAGAAGGGGGAAAGAACAAGGTTGGGGACCAAGACCTAAGAATGCTAGAAATGAAGCAATTCAACAAAGCACAAAAGAAACTGATAAGATGTTGAACAGTGAAGCTTACACCAACTCAAATGAAGAGGAAAATGAAACACATGCTGGAAATTCATGGGAGAACATTCAAAGTCAAACCAATCAAGAGGCAATCATTATAACTCAAGGCTCAATGATAAAAGCTAGAGCTAAAAGATTTCAAGATGAATTAAATGCTTGTTTACAAGCTAGATTTTCAGTCTTCAATAAAGAGTTGGAACTTCAAGAGTCACTTGGACACCCAAGGATCATAA TAGAATATATTGATGCTATTACGTAATTATTGTGTAGGATGGAATGATAACATTAAAAAGCACTTCATCACAAGAAGGGAGTGAACCTCTTCTAGAAGGGGGAAAGAACAAGGTTGGGGACCAAGACCTAAGAATGCTAGAAATGAAGCAATTCAACAAAGCACAAAAGAAACTGATAAGATGTTGAACAGTGAAGCTTACACCAACTCAAATGAAGAGGAAAATGAAACACATGCTGGAAATTCATGGGAGAACATTCAAAGTCAAACCAATCAAGAGGCAATCATTATAACTCAAGGCTCAATGATAAAAGCTAGAGCTAAAAGATTTCAAGATGAATTAAATGCTTGTTTACAAGCTAGATTTTCAGTCTTCAATAAAGAGTTGGAACTTCAAGAGTCACTTGGACACCCAAGGATCATAA ATGTTGAACAGTGAAGCTTACACCAACTCAAATGAAGAGGAAAATGAAACACATGCTGGAAATTCATGGGAGAACATTCAAAGTCAAACCAATCAAGAGGCAATCATTATAACTCAAGGCTCAATGATAAAAGCTAGAGCTAAAAGATTTCAAGATGAATTAAATGCTTGTTTACAAGCTAGATTTTCAGTCTTCAATAAAGAGTTGGAACTTCAAGAGTCACTTGGACACCCAAGGATCATA MLNSEAYTNSNEEENETHAGNSWENIQSQTNQEAIIITQGSMIKARAKRFQDELNACLQARFSVFNKELELQESLGHPRII Homology
BLAST of MELO3C035409.jh1 vs. NCBI nr
Match: TYK15114.1 (Zinc finger, CCHC-type [Cucumis melo var. makuwa]) HSP 1 Score: 139 bits (349), Expect = 6.40e-37 Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. NCBI nr
Match: KAA0065903.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 139 bits (349), Expect = 1.04e-36 Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. NCBI nr
Match: TYK19543.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (254), Expect = 3.11e-23 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. NCBI nr
Match: KAA0036753.1 (hypothetical protein E6C27_scaffold20G00320 [Cucumis melo var. makuwa] >TYJ95820.1 hypothetical protein E5676_scaffold110G001050 [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 7.64e-15 Identity = 52/87 (59.77%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. NCBI nr
Match: TYK14528.1 (integrase [Cucumis melo var. makuwa]) HSP 1 Score: 67.8 bits (164), Expect = 2.18e-12 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CW05 (Zinc finger, CCHC-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00430 PE=4 SV=1) HSP 1 Score: 139 bits (349), Expect = 3.10e-37 Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VCL9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00820 PE=4 SV=1) HSP 1 Score: 139 bits (349), Expect = 5.03e-37 Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D7R5 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00380 PE=4 SV=1) HSP 1 Score: 102 bits (254), Expect = 1.50e-23 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. ExPASy TrEMBL
Match: A0A5D3B744 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001050 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.70e-15 Identity = 52/87 (59.77%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of MELO3C035409.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CTJ1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00060 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.05e-12 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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