MELO3C035362 (gene) Melon (DHL92) v4

Overview
NameMELO3C035362
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 7621083 .. 7621450 (+)
RNA-Seq ExpressionMELO3C035362
SyntenyMELO3C035362
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACGAAAAAGGGAAGTGTTAGAGGAAGAACAAACTCTACCTCTTCAAATGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACCATGGTAACTAGATCTAGAACAAGATCGTTTGGCATACGGGTTGGGTCTCCCACGGAGTCATCAACTCTACCTAGGCCTTTGGTCAATCTTATCCATCCTTCGGTCACTCATGGTTTATTTCTTTTTGTCAGAACTAATTTTCCCCTACGGTTTATTCAACGGTGGAATAATTTTAGTCTTACAGACGATGTTCTATCAACTCCAATTCAAGAATCATATTTTTATTTCTCAAGAAC

mRNA sequence

AGAACGAAAAAGGGAAGTGTTAGAGGAAGAACAAACTCTACCTCTTCAAATGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACCATGGTAACTAGATCTAGAACAAGATCGTTTGGCATACGGGTTGGGTCTCCCACGGAGTCATCAACTCTACCTAGGCCTTTGGTCAATCTTATCCATCCTTCGGTCACTCATGGTTTATTTCTTTTTGTCAGAACTAATTTTCCCCTACGGTTTATTCAACGGTGGAATAATTTTAGTCTTACAGACGATGTTCTATCAACTCCAATTCAAGAATCATATTTTTATTTCTCAAGAAC

Coding sequence (CDS)

AGAACGAAAAAGGGAAGTGTTAGAGGAAGAACAAACTCTACCTCTTCAAATGGCAATCGCCCATCTTCTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACCATGGTAACTAGATCTAGAACAAGATCGTTTGGCATACGGGTTGGGTCTCCCACGGAGTCATCAACTCTACCTAGGCCTTTGGTCAATCTTATCCATCCTTCGGTCACTCATGGTTTATTTCTTTTTGTCAGAACTAATTTTCCCCTACGGTTTATTCAACGGTGGAATAATTTTAGTCTTACAGACGATGTTCTATCAACTCCAATTCAAGAATCATATTTTTATTTCTCAAGA

Protein sequence

RTKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSPTESSTLPRPLVNLIHPSVTHGLFLFVRTNFPLRFIQRWNNFSLTDDVLSTPIQESYFYFSR
Homology
BLAST of MELO3C035362 vs. NCBI nr
Match: KAA0041699.1 (hypothetical protein E6C27_scaffold67G00290 [Cucumis melo var. makuwa] >TYK06322.1 hypothetical protein E5676_scaffold594G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 146.0 bits (367), Expect = 2.2e-31
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  RTKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGS 60
          RTKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGS
Sbjct: 20 RTKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGS 79

Query: 61 PTESSTLPRPLVNLIHPS 79
          PTESSTLPRPLVNLIHPS
Sbjct: 80 PTESSTLPRPLVNLIHPS 97

BLAST of MELO3C035362 vs. NCBI nr
Match: KAA0032003.1 (hypothetical protein E6C27_scaffold134G001000 [Cucumis melo var. makuwa] >TYK16824.1 hypothetical protein E5676_scaffold96G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-21
Identity = 61/77 (79.22%), Postives = 67/77 (87.01%), Query Frame = 0

Query: 2  TKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSP 61
          ++KGS RGRTN TSS GNR  SSSNSAPSPMSA+QY MDLGFT VTRSR+RS+GIR+GSP
Sbjct: 3  SEKGSARGRTNFTSSKGNRQYSSSNSAPSPMSANQYTMDLGFTTVTRSRSRSYGIRIGSP 62

Query: 62 TESSTLPRPLVNLIHPS 79
          TESST PRP VNLI PS
Sbjct: 63 TESSTPPRPSVNLIRPS 79

BLAST of MELO3C035362 vs. NCBI nr
Match: KAA0038837.1 (hypothetical protein E6C27_scaffold2487G00030 [Cucumis melo var. makuwa] >TYK14263.1 hypothetical protein E5676_scaffold1121G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 2.6e-21
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 0

Query: 2  TKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSP 61
          ++KGS RGRTNSTSS GNRPSSSSN APSPMSA QYAMDLGFT VTRSR+RS  IR+GSP
Sbjct: 3  SEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSAYQYAMDLGFTTVTRSRSRSSSIRIGSP 62

Query: 62 TESSTLPRPLVNLIHPS 79
          TESST PRP  NLI PS
Sbjct: 63 TESSTPPRPSANLIRPS 79

BLAST of MELO3C035362 vs. NCBI nr
Match: KAA0060855.1 (hypothetical protein E6C27_scaffold137G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 2.6e-21
Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0

Query: 2  TKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSP 61
          ++KGSVRGRTNSTSS GNRPSSSSNSAPSPMSADQYAMDLGF  VTRSR+RS  IR+GS 
Sbjct: 3  SEKGSVRGRTNSTSSKGNRPSSSSNSAPSPMSADQYAMDLGFATVTRSRSRSSDIRIGSL 62

Query: 62 TESSTLPRPLVNLIHP 78
          TESST PRP  NLI P
Sbjct: 63 TESSTSPRPSTNLIRP 78

BLAST of MELO3C035362 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-21
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 0

Query: 4  KGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSPTE 63
          KGS RGRTNSTSS GNRP SSSNSAPSP+SADQYAMDLGFT VTR  +RSFGI +GSPTE
Sbjct: 5  KGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIGSPTE 64

Query: 64 SSTLPRPLVNLIHPS 79
          SST PRP  NLI PS
Sbjct: 65 SSTPPRPSTNLIRPS 79

BLAST of MELO3C035362 vs. ExPASy TrEMBL
Match: A0A5D3C509 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00320 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  RTKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGS 60
          RTKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGS
Sbjct: 20 RTKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGS 79

Query: 61 PTESSTLPRPLVNLIHPS 79
          PTESSTLPRPLVNLIHPS
Sbjct: 80 PTESSTLPRPLVNLIHPS 97

BLAST of MELO3C035362 vs. ExPASy TrEMBL
Match: A0A5D3D0R2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00980 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 9.8e-22
Identity = 61/77 (79.22%), Postives = 67/77 (87.01%), Query Frame = 0

Query: 2  TKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSP 61
          ++KGS RGRTN TSS GNR  SSSNSAPSPMSA+QY MDLGFT VTRSR+RS+GIR+GSP
Sbjct: 3  SEKGSARGRTNFTSSKGNRQYSSSNSAPSPMSANQYTMDLGFTTVTRSRSRSYGIRIGSP 62

Query: 62 TESSTLPRPLVNLIHPS 79
          TESST PRP VNLI PS
Sbjct: 63 TESSTPPRPSVNLIRPS 79

BLAST of MELO3C035362 vs. ExPASy TrEMBL
Match: A0A5A7TB73 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1121G00570 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 0

Query: 2  TKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSP 61
          ++KGS RGRTNSTSS GNRPSSSSN APSPMSA QYAMDLGFT VTRSR+RS  IR+GSP
Sbjct: 3  SEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSAYQYAMDLGFTTVTRSRSRSSSIRIGSP 62

Query: 62 TESSTLPRPLVNLIHPS 79
          TESST PRP  NLI PS
Sbjct: 63 TESSTPPRPSANLIRPS 79

BLAST of MELO3C035362 vs. ExPASy TrEMBL
Match: A0A5A7V4P4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00900 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21
Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0

Query: 2  TKKGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSP 61
          ++KGSVRGRTNSTSS GNRPSSSSNSAPSPMSADQYAMDLGF  VTRSR+RS  IR+GS 
Sbjct: 3  SEKGSVRGRTNSTSSKGNRPSSSSNSAPSPMSADQYAMDLGFATVTRSRSRSSDIRIGSL 62

Query: 62 TESSTLPRPLVNLIHP 78
          TESST PRP  NLI P
Sbjct: 63 TESSTSPRPSTNLIRP 78

BLAST of MELO3C035362 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 0

Query: 4  KGSVRGRTNSTSSNGNRPSSSSNSAPSPMSADQYAMDLGFTMVTRSRTRSFGIRVGSPTE 63
          KGS RGRTNSTSS GNRP SSSNSAPSP+SADQYAMDLGFT VTR  +RSFGI +GSPTE
Sbjct: 5  KGSARGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIGSPTE 64

Query: 64 SSTLPRPLVNLIHPS 79
          SST PRP  NLI PS
Sbjct: 65 SSTPPRPSTNLIRPS 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0041699.12.2e-31100.00hypothetical protein E6C27_scaffold67G00290 [Cucumis melo var. makuwa] >TYK06322... [more]
KAA0032003.12.0e-2179.22hypothetical protein E6C27_scaffold134G001000 [Cucumis melo var. makuwa] >TYK168... [more]
KAA0038837.12.6e-2180.52hypothetical protein E6C27_scaffold2487G00030 [Cucumis melo var. makuwa] >TYK142... [more]
KAA0060855.12.6e-2181.58hypothetical protein E6C27_scaffold137G00900 [Cucumis melo var. makuwa][more]
KAA0043136.13.5e-2181.33putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative... [more]
Match NameE-valueIdentityDescription
A0A5D3C5091.0e-31100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D0R29.8e-2279.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TB731.3e-2180.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V4P41.3e-2181.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TM801.7e-2181.33Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..33

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035362.1MELO3C035362.1mRNA