Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCCAAACTACTTTCTAAGCTCTCCCCTCACTCCCCCACGATCATAGATGCTACCGTTTCCTCTCCTTACTCTTCTTCATCTTCAAATTTAAGACCCCAAGATGATCTTTCAACGGCTCTTGCCAAGCATAATACAGTTGAAGCCCATCTGGCTCAGGTTGAAAATCGACTCAAAAATTGGTCTATCCCAAAATTAGAGGCCAACCAAGTGTATAAGATCAATACCTTCAATTTTTCTCAGCAAGACGTTATCGTCATTACTGAAGAAAACGTGGCAATGAAGAATGAATTCACTGCTATCAAACTCTTACCTGAAGAAACTCTCTTCAAAGTCAAAGAAAAGTTCAAGTACCTTCATATAGGATGCGTCCAAGTTGCCTTAAAACCTCTCTTTAGAGAAGGTTTAGATGTTCCTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTTAGATTTACTCCCTCTCTCTTAGGAATT
mRNA sequence
ATGCTTTCCAAACTACTTTCTAAGCTCTCCCCTCACTCCCCCACGATCATAGATGCTACCGTTTCCTCTCCTTACTCTTCTTCATCTTCAAATTTAAGACCCCAAGATGATCTTTCAACGGCTCTTGCCAAGCATAATACAGTTGAAGCCCATCTGGCTCAGGTTGAAAATCGACTCAAAAATTGGTCTATCCCAAAATTAGAGGCCAACCAAGTGTATAAGATCAATACCTTCAATTTTTCTCAGCAAGACGTTATCGTCATTACTGAAGAAAACGTGGCAATGAAGAATGAATTCACTGCTATCAAACTCTTACCTGAAGAAACTCTCTTCAAAGTCAAAGAAAAGTTCAAGTACCTTCATATAGGATGCGTCCAAGTTGCCTTAAAACCTCTCTTTAGAGAAGGTTTAGATGTTCCTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTTAGATTTACTCCCTCTCTCTTAGGAATT
Coding sequence (CDS)
ATGCTTTCCAAACTACTTTCTAAGCTCTCCCCTCACTCCCCCACGATCATAGATGCTACCGTTTCCTCTCCTTACTCTTCTTCATCTTCAAATTTAAGACCCCAAGATGATCTTTCAACGGCTCTTGCCAAGCATAATACAGTTGAAGCCCATCTGGCTCAGGTTGAAAATCGACTCAAAAATTGGTCTATCCCAAAATTAGAGGCCAACCAAGTGTATAAGATCAATACCTTCAATTTTTCTCAGCAAGACGTTATCGTCATTACTGAAGAAAACGTGGCAATGAAGAATGAATTCACTGCTATCAAACTCTTACCTGAAGAAACTCTCTTCAAAGTCAAAGAAAAGTTCAAGTACCTTCATATAGGATGCGTCCAAGTTGCCTTAAAACCTCTCTTTAGAGAAGGTTTAGATGTTCCTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTTAGATTTACTCCCTCTCTCTTAGGAATT
Protein sequence
MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYLHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Homology
BLAST of MELO3C035360 vs. NCBI nr
Match:
KAA0041674.1 (movement protein [Cucumis melo var. makuwa] >TYK06295.1 movement protein [Cucumis melo var. makuwa])
HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK 60
MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK
Sbjct: 1 MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK 60
Query: 61 NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL 120
NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL
Sbjct: 61 NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL 120
Query: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 160
BLAST of MELO3C035360 vs. NCBI nr
Match:
TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 148/160 (92.50%), Postives = 153/160 (95.62%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK 60
MLSKLLSKLSPHSPTIIDAT SS YSS SSN R QDDLSTALAKHNT EAHLAQVENRLK
Sbjct: 1 MLSKLLSKLSPHSPTIIDATASSSYSSLSSNSRSQDDLSTALAKHNTAEAHLAQVENRLK 60
Query: 61 NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL 120
NWSIPKLEA+QVYKINTFNFSQQD+IVITEENVAMK+EFTAIKLLPEETL KV+E+FKYL
Sbjct: 61 NWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKYL 120
Query: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 160
BLAST of MELO3C035360 vs. NCBI nr
Match:
KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 148/160 (92.50%), Postives = 153/160 (95.62%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK 60
MLSKLLSKLSPHSPTIIDAT SS YSS SSN R QDDLSTALAKHNT EAHLAQVENRLK
Sbjct: 1 MLSKLLSKLSPHSPTIIDATASSSYSSLSSNSRSQDDLSTALAKHNTAEAHLAQVENRLK 60
Query: 61 NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL 120
NWSIPKLEA+QVYKINTFNFSQQD+IVITEENVAMK+EFTAIKLLPEETL KV+E+FKYL
Sbjct: 61 NWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKYL 120
Query: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 160
BLAST of MELO3C035360 vs. NCBI nr
Match:
KAA0047922.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 286.2 bits (731), Expect = 1.8e-73
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPY-SSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRL 60
MLSKLLSKLS HS TIIDATVSS Y SSSSSNLRPQDDLSTALAKHNT EAHLAQVENRL
Sbjct: 1 MLSKLLSKLSLHSLTIIDATVSSSYSSSSSSNLRPQDDLSTALAKHNTAEAHLAQVENRL 60
Query: 61 KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKY 120
KNWSIPKLEANQVYKINTFNFSQQ VIVITEENVAMK+EFT IKLLPEETLFKVKEKFKY
Sbjct: 61 KNWSIPKLEANQVYKINTFNFSQQHVIVITEENVAMKDEFTPIKLLPEETLFKVKEKFKY 120
Query: 121 LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Sbjct: 121 LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
BLAST of MELO3C035360 vs. NCBI nr
Match:
TYK04698.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 152/161 (94.41%), Postives = 154/161 (95.65%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPY-SSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRL 60
MLSKLLSKLSPHSPTIIDATVSS Y SSSSSNLRPQDDLS ALAKHNT EAHLAQVENRL
Sbjct: 1 MLSKLLSKLSPHSPTIIDATVSSSYSSSSSSNLRPQDDLSMALAKHNTTEAHLAQVENRL 60
Query: 61 KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKY 120
KNWSIPKLEANQVYKINTFNFSQQ VIVITEENVAMK+E TAIKLLP+ETLFKVKEKFKY
Sbjct: 61 KNWSIPKLEANQVYKINTFNFSQQHVIVITEENVAMKDELTAIKLLPKETLFKVKEKFKY 120
Query: 121 LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
LHIGCVQVALKPLFREGLDV VYLALRDKRHLRFTPSLLGI
Sbjct: 121 LHIGCVQVALKPLFREGLDVLVYLALRDKRHLRFTPSLLGI 161
BLAST of MELO3C035360 vs. ExPASy TrEMBL
Match:
A0A5D3C4I7 (Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00050 PE=4 SV=1)
HSP 1 Score: 309.7 bits (792), Expect = 7.2e-81
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK 60
MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK
Sbjct: 1 MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK 60
Query: 61 NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL 120
NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL
Sbjct: 61 NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL 120
Query: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 160
BLAST of MELO3C035360 vs. ExPASy TrEMBL
Match:
A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)
HSP 1 Score: 287.0 bits (733), Expect = 5.0e-74
Identity = 148/160 (92.50%), Postives = 153/160 (95.62%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK 60
MLSKLLSKLSPHSPTIIDAT SS YSS SSN R QDDLSTALAKHNT EAHLAQVENRLK
Sbjct: 1 MLSKLLSKLSPHSPTIIDATASSSYSSLSSNSRSQDDLSTALAKHNTAEAHLAQVENRLK 60
Query: 61 NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL 120
NWSIPKLEA+QVYKINTFNFSQQD+IVITEENVAMK+EFTAIKLLPEETL KV+E+FKYL
Sbjct: 61 NWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKYL 120
Query: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 160
BLAST of MELO3C035360 vs. ExPASy TrEMBL
Match:
A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)
HSP 1 Score: 287.0 bits (733), Expect = 5.0e-74
Identity = 148/160 (92.50%), Postives = 153/160 (95.62%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPYSSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRLK 60
MLSKLLSKLSPHSPTIIDAT SS YSS SSN R QDDLSTALAKHNT EAHLAQVENRLK
Sbjct: 1 MLSKLLSKLSPHSPTIIDATASSSYSSLSSNSRSQDDLSTALAKHNTAEAHLAQVENRLK 60
Query: 61 NWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKYL 120
NWSIPKLEA+QVYKINTFNFSQQD+IVITEENVAMK+EFTAIKLLPEETL KV+E+FKYL
Sbjct: 61 NWSIPKLEASQVYKINTFNFSQQDIIVITEENVAMKDEFTAIKLLPEETLLKVRERFKYL 120
Query: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Sbjct: 121 HIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 160
BLAST of MELO3C035360 vs. ExPASy TrEMBL
Match:
A0A5A7TWP4 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G002070 PE=4 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 8.5e-74
Identity = 153/161 (95.03%), Postives = 154/161 (95.65%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPY-SSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRL 60
MLSKLLSKLS HS TIIDATVSS Y SSSSSNLRPQDDLSTALAKHNT EAHLAQVENRL
Sbjct: 1 MLSKLLSKLSLHSLTIIDATVSSSYSSSSSSNLRPQDDLSTALAKHNTAEAHLAQVENRL 60
Query: 61 KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKY 120
KNWSIPKLEANQVYKINTFNFSQQ VIVITEENVAMK+EFT IKLLPEETLFKVKEKFKY
Sbjct: 61 KNWSIPKLEANQVYKINTFNFSQQHVIVITEENVAMKDEFTPIKLLPEETLFKVKEKFKY 120
Query: 121 LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI
Sbjct: 121 LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
BLAST of MELO3C035360 vs. ExPASy TrEMBL
Match:
A0A5D3C0A5 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold676G00190 PE=4 SV=1)
HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 152/161 (94.41%), Postives = 154/161 (95.65%), Query Frame = 0
Query: 1 MLSKLLSKLSPHSPTIIDATVSSPY-SSSSSNLRPQDDLSTALAKHNTVEAHLAQVENRL 60
MLSKLLSKLSPHSPTIIDATVSS Y SSSSSNLRPQDDLS ALAKHNT EAHLAQVENRL
Sbjct: 1 MLSKLLSKLSPHSPTIIDATVSSSYSSSSSSNLRPQDDLSMALAKHNTTEAHLAQVENRL 60
Query: 61 KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKNEFTAIKLLPEETLFKVKEKFKY 120
KNWSIPKLEANQVYKINTFNFSQQ VIVITEENVAMK+E TAIKLLP+ETLFKVKEKFKY
Sbjct: 61 KNWSIPKLEANQVYKINTFNFSQQHVIVITEENVAMKDELTAIKLLPKETLFKVKEKFKY 120
Query: 121 LHIGCVQVALKPLFREGLDVPVYLALRDKRHLRFTPSLLGI 161
LHIGCVQVALKPLFREGLDV VYLALRDKRHLRFTPSLLGI
Sbjct: 121 LHIGCVQVALKPLFREGLDVLVYLALRDKRHLRFTPSLLGI 161
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0041674.1 | 1.5e-80 | 100.00 | movement protein [Cucumis melo var. makuwa] >TYK06295.1 movement protein [Cucumi... | [more] |
| TYJ98087.1 | 1.0e-73 | 92.50 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0052109.1 | 1.0e-73 | 92.50 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0047922.1 | 1.8e-73 | 95.03 | polyprotein [Cucumis melo var. makuwa] | [more] |
| TYK04698.1 | 2.3e-73 | 94.41 | polyprotein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C4I7 | 7.2e-81 | 100.00 | Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G000... | [more] |
| A0A5D3BG41 | 5.0e-74 | 92.50 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56... | [more] |
| A0A5A7UF59 | 5.0e-74 | 92.50 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57... | [more] |
| A0A5A7TWP4 | 8.5e-74 | 95.03 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G002070 P... | [more] |
| A0A5D3C0A5 | 1.1e-73 | 94.41 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold676G00190 PE... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
