MELO3C035355 (gene) Melon (DHL92) v4

Overview
NameMELO3C035355
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr12: 10630304 .. 10630719 (+)
RNA-Seq ExpressionMELO3C035355
SyntenyMELO3C035355
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCTTTCTCAAAGTCTCCAAATCCTTTCTCAAACGCCACCATCAGAACTCCTTGCCCACCGTCCTAGACCTCCTCGGCCACCGTCGGAAAGTAAGGTTGTTTTCCGACCTTGAGTCTCTCCAGCCTGCATTGAGGAATCTATTTCCATCTTCATCAAGAATGAGCACCACTTCGTCCGCAATTACGACTGTTTCGCGCTTCCAATCTTTGTCGCTTGATGTCGTCGCTAGACTAGACTCTATTGCTTGGATTCTTAAAGGTGCGATTTTTGTCTGTATTTCTTCGATTTTCTTCACAATTGGTTTGAACTTTTTGTCCTTTGTGGCGCTCGTCTCTTTCGTCGGCAACTATTATAGTGTCTACCAAGCCAATAATGGCTCTCCACAGGTTTTTCCCCCAAACTTAGCTTCTTAA

mRNA sequence

AAACCTTTCTCAAAGTCTCCAAATCCTTTCTCAAACGCCACCATCAGAACTCCTTGCCCACCGTCCTAGACCTCCTCGGCCACCGTCGGAAAGTAAGGTTGTTTTCCGACCTTGAGTCTCTCCAGCCTGCATTGAGGAATCTATTTCCATCTTCATCAAGAATGAGCACCACTTCGTCCGCAATTACGACTGTTTCGCGCTTCCAATCTTTGTCGCTTGATGTCGTCGCTAGACTAGACTCTATTGCTTGGATTCTTAAAGGTGCGATTTTTGTCTGTATTTCTTCGATTTTCTTCACAATTGGTTTGAACTTTTTGTCCTTTGTGGCGCTCGTCTCTTTCGTCGGCAACTATTATAGTGTCTACCAAGCCAATAATGGCTCTCCACAGGTTTTTCCCCCAAACTTAGCTTCTTAA

Coding sequence (CDS)

ACCTTTCTCAAAGTCTCCAAATCCTTTCTCAAACGCCACCATCAGAACTCCTTGCCCACCGTCCTAGACCTCCTCGGCCACCGTCGGAAAGTAAGGTTGTTTTCCGACCTTGAGTCTCTCCAGCCTGCATTGAGGAATCTATTTCCATCTTCATCAAGAATGAGCACCACTTCGTCCGCAATTACGACTGTTTCGCGCTTCCAATCTTTGTCGCTTGATGTCGTCGCTAGACTAGACTCTATTGCTTGGATTCTTAAAGGTGCGATTTTTGTCTGTATTTCTTCGATTTTCTTCACAATTGGTTTGAACTTTTTGTCCTTTGTGGCGCTCGTCTCTTTCGTCGGCAACTATTATAGTGTCTACCAAGCCAATAATGGCTCTCCACAGGTTTTTCCCCCAAACTTAGCTTCTTAA

Protein sequence

TFLKVSKSFLKRHHQNSLPTVLDLLGHRRKVRLFSDLESLQPALRNLFPSSSRMSTTSSAITTVSRFQSLSLDVVARLDSIAWILKGAIFVCISSIFFTIGLNFLSFVALVSFVGNYYSVYQANNGSPQVFPPNLAS
Homology
[Close]
BLAST of MELO3C035355 vs. NCBI nr
Match: KAA0040911.1 (hypothetical protein E6C27_scaffold125G00230 [Cucumis melo var. makuwa] >TYK10625.1 hypothetical protein E5676_scaffold315G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 4.4e-65
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 

Query: 1   TFLKVSKSFLKRHHQNSLPTVLDLLGHRRKVRLFSDLESLQPALRNLFPSSSRMSTTSSA 60
           TFLKVSKSFLKRHHQNSLPTVLDLLGHRRKVRLFSDLESLQPALRNLFPSSSRMSTTSSA
Sbjct: 3   TFLKVSKSFLKRHHQNSLPTVLDLLGHRRKVRLFSDLESLQPALRNLFPSSSRMSTTSSA 62

Query: 61  ITTVSRFQSLSLDVVARLDSIAWILKGAIFVCISSIFFTIGLNFLSFVALVSFVGNYYSV 120
           ITTVSRFQSLSLDVVARLDSIAWILKGAIFVCISSIFFTIGLNFLSFVALVSFVGNYYSV
Sbjct: 63  ITTVSRFQSLSLDVVARLDSIAWILKGAIFVCISSIFFTIGLNFLSFVALVSFVGNYYSV 122

Query: 121 YQANNGSPQVFPPNLAS 138
           YQANNGSPQVFPPNLAS
Sbjct: 123 YQANNGSPQVFPPNLAS 139

[Close]
BLAST of MELO3C035355 vs. ExPASy TrEMBL
Match: A0A5A7TGX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001040 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.1e-65
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 

Query: 1   TFLKVSKSFLKRHHQNSLPTVLDLLGHRRKVRLFSDLESLQPALRNLFPSSSRMSTTSSA 60
           TFLKVSKSFLKRHHQNSLPTVLDLLGHRRKVRLFSDLESLQPALRNLFPSSSRMSTTSSA
Sbjct: 3   TFLKVSKSFLKRHHQNSLPTVLDLLGHRRKVRLFSDLESLQPALRNLFPSSSRMSTTSSA 62

Query: 61  ITTVSRFQSLSLDVVARLDSIAWILKGAIFVCISSIFFTIGLNFLSFVALVSFVGNYYSV 120
           ITTVSRFQSLSLDVVARLDSIAWILKGAIFVCISSIFFTIGLNFLSFVALVSFVGNYYSV
Sbjct: 63  ITTVSRFQSLSLDVVARLDSIAWILKGAIFVCISSIFFTIGLNFLSFVALVSFVGNYYSV 122

Query: 121 YQANNGSPQVFPPNLAS 138
           YQANNGSPQVFPPNLAS
Sbjct: 123 YQANNGSPQVFPPNLAS 139

The following BLAST results are available for this feature:
BLAST of MELO3C035355 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035355 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0040911.14.4e-65100.00hypothetical protein E6C27_scaffold125G00230 [Cucumis melo var. makuwa] >TYK1062... [more]
BLAST of MELO3C035355 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TGX12.1e-65100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C035355 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035355.1MELO3C035355.1mRNA