MELO3C035287.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C035287.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein PSY3
Locationchr12: 751217 .. 751849 (+)
RNA-Seq ExpressionMELO3C035287.jh1
SyntenyMELO3C035287.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGTTTATTCTTTTCTCTCTGCGTAAATATATTTACCAATATATATATATATATTGATTTCTTTACTTCCTAATCTCCATTACCAATCATTCAAACAAAGAAAAAACAGCAATAAATATGGATTATTCCAAAACTCGTCTCGCCCTCCTCCTCTTGCTCTCGTTTGCCATCGTTACTTTTGCTCGGATCATACCCCATTCAGGTACAGAAAATATGCTAATTTATAACCTATTGTTGAGTAGTTTAGATTTACATAATGTATAGAAAACTAAAATCTAATATCATATCAGAAAACCAAGAGGTAGCATATACAATAAATGACTATCCTGATCCAGGAGCTAATCCAAGACATGATCCATTTCCACCTCCGCCACAACAATTCGAGGTCAGCGTTGTCAAGGTCCAACACATCAGGAAAAACCCCTAAAGAAAAATTTACTCATTAGAGAAGGAAGAAAGCATCGGCAAGGAAGCTTGAAAAGAGAAATAATGTTGTGGATGAGCCAATAATAATACTATATATATAATCGATAATTTATATAATAATTCCCTTTATATGCGTTGAGAATGGAGTAATATGCATTATCAAATTAATGTAATAAATGCTGAAAAAATAGTATGGTGTAATGAAC

mRNA sequence

ATAGTTTATTCTTTTCTCTCTGCGTAAATATATTTACCAATATATATATATATATTGATTTCTTTACTTCCTAATCTCCATTACCAATCATTCAAACAAAGAAAAAACAGCAATAAATATGGATTATTCCAAAACTCGTCTCGCCCTCCTCCTCTTGCTCTCGTTTGCCATCGTTACTTTTGCTCGGATCATACCCCATTCAGAAAACCAAGAGGTAGCATATACAATAAATGACTATCCTGATCCAGGAGCTAATCCAAGACATGATCCATTTCCACCTCCGCCACAACAATTCGAGGTCAGCGTTGTCAAGGTCCAACACATCAGGAAAAACCCCTAAAGAAAAATTTACTCATTAGAGAAGGAAGAAAGCATCGGCAAGGAAGCTTGAAAAGAGAAATAATGTTGTGGATGAGCCAATAATAATACTATATATATAATCGATAATTTATATAATAATTCCCTTTATATGCGTTGAGAATGGAGTAATATGCATTATCAAATTAATGTAATAAATGCTGAAAAAATAGTATGGTGTAATGAAC

Coding sequence (CDS)

ATGGATTATTCCAAAACTCGTCTCGCCCTCCTCCTCTTGCTCTCGTTTGCCATCGTTACTTTTGCTCGGATCATACCCCATTCAGAAAACCAAGAGGTAGCATATACAATAAATGACTATCCTGATCCAGGAGCTAATCCAAGACATGATCCATTTCCACCTCCGCCACAACAATTCGAGGTCAGCGTTGTCAAGGTCCAACACATCAGGAAAAACCCCTAA

Protein sequence

MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFEVSVVKVQHIRKNP
Homology
[Close]
BLAST of MELO3C035287.jh1 vs. NCBI nr
Match: KAA0031837.1 (hypothetical protein E6C27_scaffold848G00870 [Cucumis melo var. makuwa] >TYJ97300.1 hypothetical protein E5676_scaffold194G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (377), Expect = 2.02e-45
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE 60
          MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE
Sbjct: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE 60

Query: 61 VSVVKVQHIRKNP 73
          VSVVKVQHIRKNP
Sbjct: 61 VSVVKVQHIRKNP 73

[Close]
BLAST of MELO3C035287.jh1 vs. NCBI nr
Match: KAA0031836.1 (Protein PSY3 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (307), Expect = 9.75e-35
Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 0 

Query: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE 60
          MDYSK RLAL LLLSF +VT ARIIPHSENQE AY INDYPDPGANPRHDPFPPP QQFE
Sbjct: 1  MDYSKARLALFLLLSFVLVTSARIIPHSENQEAAYMINDYPDPGANPRHDPFPPPSQQFE 60

Query: 61 VSVVKVQHIRKN 72
          VSVVK   I+KN
Sbjct: 61 VSVVKGHRIKKN 72

[Close]
BLAST of MELO3C035287.jh1 vs. NCBI nr
Match: KAA0031838.1 (hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (297), Expect = 3.36e-33
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MDYSKTRL-ALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQF 60
          M+Y K RL AL LLLSFA+VT ARI+PHSENQE AY INDYPDPGANPRHDPFPPPPQQF
Sbjct: 1  MNYFKARLIALFLLLSFALVTSARIMPHSENQEAAYMINDYPDPGANPRHDPFPPPPQQF 60

Query: 61 EVSVVKVQHIRKNP 73
          E+SVVK   I+KNP
Sbjct: 61 EISVVKDHDIKKNP 74

[Close]
BLAST of MELO3C035287.jh1 vs. NCBI nr
Match: KGN65816.1 (hypothetical protein Csa_023196 [Cucumis sativus])

HSP 1 Score: 109 bits (272), Expect = 2.19e-29
Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQ-F 60
          MDYSK RLAL LLLSFA+ T ARIIPHSENQE  Y +NDY DPGANPRHDPFPPP +  F
Sbjct: 1  MDYSKARLALFLLLSFALATSARIIPHSENQEATYIMNDYSDPGANPRHDPFPPPLEHSF 60

Query: 61 EVSVVKVQHIRKNP 73
          EV+ V+ +HI KNP
Sbjct: 61 EVNAVRGRHITKNP 74

[Close]
BLAST of MELO3C035287.jh1 vs. NCBI nr
Match: TYJ97296.1 (Protein PSY3 [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 2.73e-25
Identity = 51/73 (69.86%), Postives = 57/73 (78.08%), Query Frame = 0 

Query: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE 60
          MDYSK RLAL LLLSF +V  ARIIP+SEN E AY INDYPDPGANPRH P PPP +Q +
Sbjct: 1  MDYSKARLALFLLLSFVLVASARIIPYSENHEAAYMINDYPDPGANPRHRP-PPPSRQSK 60

Query: 61 VSVVKVQHIRKNP 73
          VS+ K  HI K+P
Sbjct: 61 VSIDKGSHIGKSP 72

[Close]
BLAST of MELO3C035287.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BBU7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00970 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 9.77e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE 60
          MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE
Sbjct: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE 60

Query: 61 VSVVKVQHIRKNP 73
          VSVVKVQHIRKNP
Sbjct: 61 VSVVKVQHIRKNP 73

[Close]
BLAST of MELO3C035287.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SPC6 (Protein PSY3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00860 PE=4 SV=1)

HSP 1 Score: 122 bits (307), Expect = 4.72e-35
Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 0 

Query: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQFE 60
          MDYSK RLAL LLLSF +VT ARIIPHSENQE AY INDYPDPGANPRHDPFPPP QQFE
Sbjct: 1  MDYSKARLALFLLLSFVLVTSARIIPHSENQEAAYMINDYPDPGANPRHDPFPPPSQQFE 60

Query: 61 VSVVKVQHIRKN 72
          VSVVK   I+KN
Sbjct: 61 VSVVKGHRIKKN 72

[Close]
BLAST of MELO3C035287.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SMH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00880 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 1.63e-33
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MDYSKTRL-ALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQF 60
          M+Y K RL AL LLLSFA+VT ARI+PHSENQE AY INDYPDPGANPRHDPFPPPPQQF
Sbjct: 1  MNYFKARLIALFLLLSFALVTSARIMPHSENQEAAYMINDYPDPGANPRHDPFPPPPQQF 60

Query: 61 EVSVVKVQHIRKNP 73
          E+SVVK   I+KNP
Sbjct: 61 EISVVKDHDIKKNP 74

[Close]
BLAST of MELO3C035287.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LV67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532230 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 6.64e-33
Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQ-F 60
          MDYSK RL+LLLLLSF +VT ARIIPHSENQEVAY INDYPDPGANPRH+PFPPPP+  F
Sbjct: 1  MDYSKARLSLLLLLSFVLVTSARIIPHSENQEVAYMINDYPDPGANPRHNPFPPPPRHLF 60

Query: 61 EVSVVKVQHIRKNP 73
          E+SVVK   I KNP
Sbjct: 61 EISVVKDGDITKNP 74

[Close]
BLAST of MELO3C035287.jh1 vs. ExPASy TrEMBL
Match: A0A0A0M0T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532240 PE=4 SV=1)

HSP 1 Score: 109 bits (272), Expect = 1.06e-29
Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 1  MDYSKTRLALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQ-F 60
          MDYSK RLAL LLLSFA+ T ARIIPHSENQE  Y +NDY DPGANPRHDPFPPP +  F
Sbjct: 1  MDYSKARLALFLLLSFALATSARIIPHSENQEATYIMNDYSDPGANPRHDPFPPPLEHSF 60

Query: 61 EVSVVKVQHIRKNP 73
          EV+ V+ +HI KNP
Sbjct: 61 EVNAVRGRHITKNP 74

The following BLAST results are available for this feature:
BLAST of MELO3C035287.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0031837.12.02e-45100.00hypothetical protein E6C27_scaffold848G00870 [Cucumis melo var. makuwa] >TYJ9730... [more]
KAA0031836.19.75e-3583.33Protein PSY3 [Cucumis melo var. makuwa][more]
KAA0031838.13.36e-3379.73hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa][more]
KGN65816.12.19e-2972.97hypothetical protein Csa_023196 [Cucumis sativus][more]
TYJ97296.12.73e-2569.86Protein PSY3 [Cucumis melo var. makuwa][more]
BLAST of MELO3C035287.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035287.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BBU79.77e-46100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SPC64.72e-3583.33Protein PSY3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00860 P... [more]
A0A5A7SMH71.63e-3379.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LV676.64e-3379.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532230 PE=4 SV=1[more]
A0A0A0M0T81.06e-2972.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532240 PE=4 SV=1[more]
BLAST of MELO3C035287.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035287.jh1.t1MELO3C035287.jh1.t1mRNA