MELO3C035284 (gene) Melon (DHL92) v4

Overview
NameMELO3C035284
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein PSY3
Locationchr12: 688521 .. 689153 (+)
RNA-Seq ExpressionMELO3C035284
SyntenyMELO3C035284
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGTTTGTTTATTTCTCTCTTATGTAAATACATATATAAATACATTGGTTTCTTTCTTCCTAATCTCCATTACCAATCATTCAAACAAAGACAAAAAAACAACTAACATGAATTATTCCAAGGCTTGTCTGATCGCCCTCTTCCTCCTACTCTCATTTGCCCTCGTTACCTCGGCTCGGATCATGCCCCACTCAGGTACACAAAATTTGTTAATTTATAACCTATTGTTGAATAGTCTAGATTTGTATAATAATGTACAGAAAACTAAAATCTTAGTATCATATCAGAAAACCAAGACGGAGCATATATGATAAATGATTACCCTGATCCGGGAGCTAATCCAAGACATGATCCATTCCCACCCCCGCCACAGCAGTTCGAGATTAGCGTTGTCAAGGACCACGACATCAAAAAAAATCCCTAAAGAGAATTTTGCTTGTTAGAGGAGGAGAAAGCATCGCAACGAAGCTTAAAAAGAGAAATAATGATGTGCATGAACCAATAATAGTACTATATCTAAATATGTTATCGATAATTTATATATAATAATTCCCTTTATGTGCTTTGACAATGTAGTAATATAATTATCAAATTAATGTAATAAATGCTGGAAATATAGTATGGTAATGAAC

mRNA sequence

ATAGTTTGTTTATTTCTCTCTTATGTAAATACATATATAAATACATTGGTTTCTTTCTTCCTAATCTCCATTACCAATCATTCAAACAAAGACAAAAAAACAACTAACATGAATTATTCCAAGGCTTGTCTGATCGCCCTCTTCCTCCTACTCTCATTTGCCCTCGTTACCTCGGCTCGGATCATGCCCCACTCAGAAAACCAAGACGGAGCATATATGATAAATGATTACCCTGATCCGGGAGCTAATCCAAGACATGATCCATTCCCACCCCCGCCACAGCAGTTCGAGATTAGCGTTGTCAAGGACCACGACATCAAAAAAAATCCCTAAAGAGAATTTTGCTTGTTAGAGGAGGAGAAAGCATCGCAACGAAGCTTAAAAAGAGAAATAATGATGTGCATGAACCAATAATAGTACTATATCTAAATATGTTATCGATAATTTATATATAATAATTCCCTTTATGTGCTTTGACAATGTAGTAATATAATTATCAAATTAATGTAATAAATGCTGGAAATATAGTATGGTAATGAAC

Coding sequence (CDS)

ATAGTTTGTTTATTTCTCTCTTATGTAAATACATATATAAATACATTGGTTTCTTTCTTCCTAATCTCCATTACCAATCATTCAAACAAAGACAAAAAAACAACTAACATGAATTATTCCAAGGCTTGTCTGATCGCCCTCTTCCTCCTACTCTCATTTGCCCTCGTTACCTCGGCTCGGATCATGCCCCACTCAGAAAACCAAGACGGAGCATATATGATAAATGATTACCCTGATCCGGGAGCTAATCCAAGACATGATCCATTCCCACCCCCGCCACAGCAGTTCGAGATTAGCGTTGTCAAGGACCACGACATCAAAAAAAATCCCTAA

Protein sequence

IVCLFLSYVNTYINTLVSFFLISITNHSNKDKKTTNMNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQFEISVVKDHDIKKNP
Homology
BLAST of MELO3C035284 vs. NCBI nr
Match: KAA0031838.1 (hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 144.4 bits (363), Expect = 5.7e-31
Identity = 70/74 (94.59%), Postives = 71/74 (95.95%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQF 96
           MNY KA LIALFLLLSFALVTSARIMPHSENQ+ AYMINDYPDPGANPRHDPFPPPPQQF
Sbjct: 1   MNYFKARLIALFLLLSFALVTSARIMPHSENQEAAYMINDYPDPGANPRHDPFPPPPQQF 60

Query: 97  EISVVKDHDIKKNP 111
           EISVVKDHDIKKNP
Sbjct: 61  EISVVKDHDIKKNP 74

BLAST of MELO3C035284 vs. NCBI nr
Match: KAA0031836.1 (Protein PSY3 [Cucumis melo var. makuwa])

HSP 1 Score: 124.4 bits (311), Expect = 6.1e-25
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQF 96
           M+YSKA L ALFLLLSF LVTSARI+PHSENQ+ AYMINDYPDPGANPRHDPFPPP QQF
Sbjct: 1   MDYSKARL-ALFLLLSFVLVTSARIIPHSENQEAAYMINDYPDPGANPRHDPFPPPSQQF 60

Query: 97  EISVVKDHDIKKN 110
           E+SVVK H IKKN
Sbjct: 61  EVSVVKGHRIKKN 72

BLAST of MELO3C035284 vs. NCBI nr
Match: KAA0031837.1 (hypothetical protein E6C27_scaffold848G00870 [Cucumis melo var. makuwa] >TYJ97300.1 hypothetical protein E5676_scaffold194G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-22
Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQF 96
           M+YSK  L AL LLLSFA+VT ARI+PHSENQ+ AY INDYPDPGANPRHDPFPPPPQQF
Sbjct: 1   MDYSKTRL-ALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQF 60

Query: 97  EISVVKDHDIKKNP 111
           E+SVVK   I+KNP
Sbjct: 61  EVSVVKVQHIRKNP 73

BLAST of MELO3C035284 vs. NCBI nr
Match: KGN65816.1 (hypothetical protein Csa_023196 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 4.2e-18
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPP-PQQ 96
           M+YSKA L ALFLLLSFAL TSARI+PHSENQ+  Y++NDY DPGANPRHDPFPPP    
Sbjct: 1   MDYSKARL-ALFLLLSFALATSARIIPHSENQEATYIMNDYSDPGANPRHDPFPPPLEHS 60

Query: 97  FEISVVKDHDIKKNP 111
           FE++ V+   I KNP
Sbjct: 61  FEVNAVRGRHITKNP 74

BLAST of MELO3C035284 vs. NCBI nr
Match: XP_011658636.1 (protein PSY3 [Cucumis sativus] >KGN65818.1 hypothetical protein Csa_023361 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17
Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 0

Query: 37  MNYSKACL-IALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQ 96
           M+YSKA L +ALFLLLSFALV SARI+PHSENQ+ AY+INDYPDPGANPRH P PP    
Sbjct: 1   MDYSKARLSLALFLLLSFALVASARIIPHSENQEAAYVINDYPDPGANPRHRPPPPSRHS 60

Query: 97  FEISVVKDHDIKKNP 111
            E+SVVK   IK  P
Sbjct: 61  SEVSVVKSRLIKNKP 75

BLAST of MELO3C035284 vs. ExPASy TrEMBL
Match: A0A5A7SMH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00880 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-31
Identity = 70/74 (94.59%), Postives = 71/74 (95.95%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQF 96
           MNY KA LIALFLLLSFALVTSARIMPHSENQ+ AYMINDYPDPGANPRHDPFPPPPQQF
Sbjct: 1   MNYFKARLIALFLLLSFALVTSARIMPHSENQEAAYMINDYPDPGANPRHDPFPPPPQQF 60

Query: 97  EISVVKDHDIKKNP 111
           EISVVKDHDIKKNP
Sbjct: 61  EISVVKDHDIKKNP 74

BLAST of MELO3C035284 vs. ExPASy TrEMBL
Match: A0A5A7SPC6 (Protein PSY3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00860 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQF 96
           M+YSKA L ALFLLLSF LVTSARI+PHSENQ+ AYMINDYPDPGANPRHDPFPPP QQF
Sbjct: 1   MDYSKARL-ALFLLLSFVLVTSARIIPHSENQEAAYMINDYPDPGANPRHDPFPPPSQQF 60

Query: 97  EISVVKDHDIKKN 110
           E+SVVK H IKKN
Sbjct: 61  EVSVVKGHRIKKN 72

BLAST of MELO3C035284 vs. ExPASy TrEMBL
Match: A0A5D3BBU7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00970 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22
Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQF 96
           M+YSK  L AL LLLSFA+VT ARI+PHSENQ+ AY INDYPDPGANPRHDPFPPPPQQF
Sbjct: 1   MDYSKTRL-ALLLLLSFAIVTFARIIPHSENQEVAYTINDYPDPGANPRHDPFPPPPQQF 60

Query: 97  EISVVKDHDIKKNP 111
           E+SVVK   I+KNP
Sbjct: 61  EVSVVKVQHIRKNP 73

BLAST of MELO3C035284 vs. ExPASy TrEMBL
Match: A0A0A0LV67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532230 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.3e-22
Identity = 60/75 (80.00%), Postives = 66/75 (88.00%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPPPQQ- 96
           M+YSKA L +L LLLSF LVTSARI+PHSENQ+ AYMINDYPDPGANPRH+PFPPPP+  
Sbjct: 1   MDYSKARL-SLLLLLSFVLVTSARIIPHSENQEVAYMINDYPDPGANPRHNPFPPPPRHL 60

Query: 97  FEISVVKDHDIKKNP 111
           FEISVVKD DI KNP
Sbjct: 61  FEISVVKDGDITKNP 74

BLAST of MELO3C035284 vs. ExPASy TrEMBL
Match: A0A0A0M0T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532240 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 0

Query: 37  MNYSKACLIALFLLLSFALVTSARIMPHSENQDGAYMINDYPDPGANPRHDPFPPP-PQQ 96
           M+YSKA L ALFLLLSFAL TSARI+PHSENQ+  Y++NDY DPGANPRHDPFPPP    
Sbjct: 1   MDYSKARL-ALFLLLSFALATSARIIPHSENQEATYIMNDYSDPGANPRHDPFPPPLEHS 60

Query: 97  FEISVVKDHDIKKNP 111
           FE++ V+   I KNP
Sbjct: 61  FEVNAVRGRHITKNP 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0031838.15.7e-3194.59hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa][more]
KAA0031836.16.1e-2584.93Protein PSY3 [Cucumis melo var. makuwa][more]
KAA0031837.12.2e-2278.38hypothetical protein E6C27_scaffold848G00870 [Cucumis melo var. makuwa] >TYJ9730... [more]
KGN65816.14.2e-1869.33hypothetical protein Csa_023196 [Cucumis sativus][more]
XP_011658636.11.2e-1770.67protein PSY3 [Cucumis sativus] >KGN65818.1 hypothetical protein Csa_023361 [Cucu... [more]
Match NameE-valueIdentityDescription
A0A5A7SMH72.7e-3194.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SPC62.9e-2584.93Protein PSY3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00860 P... [more]
A0A5D3BBU71.0e-2278.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LV672.3e-2280.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532230 PE=4 SV=1[more]
A0A0A0M0T82.0e-1869.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532240 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035284.1MELO3C035284.1mRNA