MELO3C035273 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035273
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CCT domain-containing protein
Location	chr12: 412948 .. 414131 (+)
RNA-Seq Expression	MELO3C035273
Synteny	MELO3C035273

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTATTTCTTATTGATGGAAGAGAGAGAGATGTGTTATAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGTTCAACAATTAGTTCCTACACCTTCCATTTGGGAAGATGATTTCAGAGCTTTTTTCGACCTCGCTGACGAAGAAAACCCCCCGCTGCTGCATCAGCCGGACTGCCATTTCCAGGACGTCAATGTTATGGAAAACAACAAGGTTTCTAATTTGAATTTAAATCTTAACTATGAAGAGGTTTTGGAAGCGTGGTCTGACCGTGGATCTCTTTGGGCCTCTGCGTCCGACCCAACTCACGTTCCCTATGTAAGTCGTCATTCCCTCCTTCATCTCCGTTTAATAATTATTTAGTTGTTCCTGTGCTTCTTTACATACTAAATAATACTACTTTGAAGAAGAAAATATATAATAAAGTTATTGATAATGTTAGGTTGAATATATATAAATATATGTAGATGGGAGAGGTTCCAATAATGAGAATGGAGGAAGAAAGAAGAAGAAGGGTGAAGAGATATAAGGAAAAGCGTCACACAAGAATGTTCTGTAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGACAGAAGGCCTAGAATTAAGGTCATTCTCTTTACTTATTTATTTATATTATACTTCTTTAGCTTTTATATATATATATATATATATATTCATCATTTCATTACCAAAATTATCATTTCATTTTCTCTACCTTATTCTGTTTAAAACGTTTTCAAAAAGCTGATAGTACTGATGGAAGAAAAATAGGTTGTCTGCTTAAAAAAAATAAAATAAAGGGTTAAATATGATAAAAGGACGTAAGAAAAGTATAAATAAATAGTAGCGATTAACAATAATAATGTTAGTTAATTAACTAAAAACGCAGATTCAAAATCAACATGAGAAAGTTTATGAAAAATGTTATTTGGATATATATATATATATTCCATTGATTTGAAGAGAAATTAAAGTGCTTTTTTATTTGACACGCAGGGACGTTTTGTGAAGACCGATTATTGTTGAATGAAAGAAAAAAAAAGTTGAAAAATATCTCAACACAAAATAATAAAAGTGTATCTCCAACTTTTTCTTTCACATGATTCTTCATGAAAATATCTAAAAAATTTATGCACTTAGAACCTTTGTGTGTGGTGTGGGGTTTGAATTTGAATA

mRNA sequence

TTTTTTTATTTCTTATTGATGGAAGAGAGAGAGATGTGTTATAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGTTCAACAATTAGTTCCTACACCTTCCATTTGGGAAGATGATTTCAGAGCTTTTTTCGACCTCGCTGACGAAGAAAACCCCCCGCTGCTGCATCAGCCGGACTGCCATTTCCAGGACGTCAATGTTATGGAAAACAACAAGGTTTCTAATTTGAATTTAAATCTTAACTATGAAGAGGTTTTGGAAGCGTGGTCTGACCGTGGATCTCTTTGGGCCTCTGCGTCCGACCCAACTCACGTTCCCTATATGGGAGAGGTTCCAATAATGAGAATGGAGGAAGAAAGAAGAAGAAGGGTGAAGAGATATAAGGAAAAGCGTCACACAAGAATGTTCTGTAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGACAGAAGGCCTAGAATTAAGGGACGTTTTGTGAAGACCGATTATTGTTGAATGAAAGAAAAAAAAAGTTGAAAAATATCTCAACACAAAATAATAAAAGTGTATCTCCAACTTTTTCTTTCACATGATTCTTCATGAAAATATCTAAAAAATTTATGCACTTAGAACCTTTGTGTGTGGTGTGGGGTTTGAATTTGAATA

Coding sequence (CDS)

ATGGAAGAGAGAGAGATGTGTTATAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGTTCAACAATTAGTTCCTACACCTTCCATTTGGGAAGATGATTTCAGAGCTTTTTTCGACCTCGCTGACGAAGAAAACCCCCCGCTGCTGCATCAGCCGGACTGCCATTTCCAGGACGTCAATGTTATGGAAAACAACAAGGTTTCTAATTTGAATTTAAATCTTAACTATGAAGAGGTTTTGGAAGCGTGGTCTGACCGTGGATCTCTTTGGGCCTCTGCGTCCGACCCAACTCACGTTCCCTATATGGGAGAGGTTCCAATAATGAGAATGGAGGAAGAAAGAAGAAGAAGGGTGAAGAGATATAAGGAAAAGCGTCACACAAGAATGTTCTGTAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGACAGAAGGCCTAGAATTAAGGGACGTTTTGTGAAGACCGATTATTGTTGA

Protein sequence

MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPDCHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTDYC

Homology

[Close]

BLAST of MELO3C035273 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.6e-13
Identity = 48/121 (39.67%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 58  VNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYMGEVPIMRMEEE----- 117
           V V E    + L L LNY+ V+  W  +G  W+S   P     +   P   M E      
Sbjct: 282 VKVKEEEHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGEST 341

Query: 118 -------------------RRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFV 155
                              R  RV RY+EKR TR+F KKIRY+VRKLNA++RPR+KGRFV
Sbjct: 342 HQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 401

[Close]

BLAST of MELO3C035273 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 71  LNLNYEEVLEAWSDRGSLW---ASASDPTHV-PYMGEVPIMRMEEERRRRVKRYKEKRHT 130
           L L+Y+ VLEAWSD+ S +      S+   V   + ++ +      R   V RYKEKR T
Sbjct: 337 LKLDYDGVLEAWSDKTSPFPDEIQGSEAVDVNARLAQIDLFGDSGMREASVLRYKEKRRT 396

Query: 131 RMFCKKIRYQVRKLNADRRPRIKGRFVK 155
           R+F KKIRYQVRKLNAD+RPR+KGRFV+
Sbjct: 397 RLFSKKIRYQVRKLNADQRPRMKGRFVR 424

[Close]

BLAST of MELO3C035273 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 62  ENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDP-------THVPYM-----------GE 121
           + ++ ++L L L+Y  V+ AW + GS W +   P       T +P++           G 
Sbjct: 270 DKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGS 329

Query: 122 VPIMR------MEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK 155
           V   +       + ER  RV RYKEKR TR+F KKIRY+VRKLNA++RPRIKGRFVK
Sbjct: 330 VTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVK 386

[Close]

BLAST of MELO3C035273 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11
Identity = 48/121 (39.67%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 60  VMENNKVSNLNLNLNYEEVLEAWSDRGSLWAS----------ASDPTHVPYMGEVPIMRM 119
           + E  K   L L L+YE V+  W  +G  W +             PTH   MGE      
Sbjct: 280 IKEEKKEKALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHT--MGESGAEAH 339

Query: 120 EEE----------------RRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFV 155
                              R  RV RY+EKR TR+F KKIRY+VRKLNA++RPR+KGRFV
Sbjct: 340 HHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 398

[Close]

BLAST of MELO3C035273 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 67  SNLNLNLNYEEVLEAWSDRGS---LWASASDPTHVPYMGEVPIMRMEEERRRRVKRYKEK 126
           +N    LNYE V+ AW  + S   +  + S    VP    +   R+  ER  RV RY++K
Sbjct: 224 NNARHRLNYENVIAAWDKQESPRDVKNNTSSFQLVP--PGIEEKRVRSEREARVWRYRDK 283

Query: 127 RHTRMFCKKIRYQVRKLNADRRPRIKGRFVK 155
           R  R+F KKIRY+VRK+NAD+RPR+KGRFV+
Sbjct: 284 RKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 312

[Close]

BLAST of MELO3C035273 vs. NCBI nr
Match: KGN65847.1 (hypothetical protein Csa_023240 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 138/170 (81.18%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MEEREMCYSWLVKSPKKEV---QQLVPTP-SIWEDDFRAFFDLADEEN-PPLLHQPD-CH 60
           MEERE+C+SWLVKSPKKE+   QQ+VPTP SIWEDDFRAFFDL  EE  PP LH PD  H
Sbjct: 1   MEEREVCFSWLVKSPKKELLHEQQVVPTPSSIWEDDFRAFFDLTHEETPPPPLHHPDYYH 60

Query: 61  FQD-VN-VME-NNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----DPTHVPYMGEVPI 120
           FQ+ VN VME NNKVSNLNLNLNYEEVLEAWSDRGSLWA+AS     D TH PYMGEVPI
Sbjct: 61  FQNHVNDVMENNNKVSNLNLNLNYEEVLEAWSDRGSLWAAASSSHSNDSTHTPYMGEVPI 120

Query: 121 MRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD 157
           +RMEEERRRRVKRYKEKR  R+FCKKIRYQVRKLNADRRPRIKGRFVKTD
Sbjct: 121 IRMEEERRRRVKRYKEKRQARIFCKKIRYQVRKLNADRRPRIKGRFVKTD 170

[Close]

BLAST of MELO3C035273 vs. NCBI nr
Match: XP_038893946.1 (zinc finger protein CONSTANS-LIKE 7 isoform X3 [Benincasa hispida])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 121/162 (74.69%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDV 60
           MEEREM +SWLVKSPKKE +Q VP  SIWEDDF+AFF+L DEENPP   L QPD HF D 
Sbjct: 1   MEEREMGFSWLVKSPKKEDEQQVPN-SIWEDDFKAFFELTDEENPPRPPLQQPDYHFHDG 60

Query: 61  NVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----DPTHVPYMGEVPIMRMEEER 120
             MEN    +LNLNLNYEEVLEAWSDRGSLWA+A+     D TH PYMGEVP  RMEEER
Sbjct: 61  AFMENKNKISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVP--RMEEER 120

Query: 121 RRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKT 156
            RRV RYKEKRHTR+F KKIRYQVRKLNA++RPRIKGRFVKT
Sbjct: 121 TRRVLRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIKGRFVKT 159

[Close]

BLAST of MELO3C035273 vs. NCBI nr
Match: XP_038893945.1 (zinc finger protein CONSTANS-LIKE 7 isoform X2 [Benincasa hispida])

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-51
Identity = 116/159 (72.96%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDV 60
           MEEREM +SWLVKSPKKE +Q VP  SIWEDDF+AFF+L DEENPP   L QPD HF D 
Sbjct: 1   MEEREMGFSWLVKSPKKEDEQQVPN-SIWEDDFKAFFELTDEENPPRPPLQQPDYHFHDG 60

Query: 61  NVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----DPTHVPYMGEVPIMRMEEER 120
             MEN    +LNLNLNYEEVLEAWSDRGSLWA+A+     D TH PYMGEVP  RMEEER
Sbjct: 61  AFMENKNKISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVP--RMEEER 120

Query: 121 RRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRF 153
            RRV RYKEKRHTR+F KKIRYQVRKLNA++RPRIK  F
Sbjct: 121 TRRVLRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIKNFF 156

[Close]

BLAST of MELO3C035273 vs. NCBI nr
Match: XP_038893944.1 (zinc finger protein CONSTANS-LIKE 16 isoform X1 [Benincasa hispida])

HSP 1 Score: 211.5 bits (537), Expect = 5.4e-51
Identity = 115/156 (73.72%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 1   MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDV 60
           MEEREM +SWLVKSPKKE +Q VP  SIWEDDF+AFF+L DEENPP   L QPD HF D 
Sbjct: 1   MEEREMGFSWLVKSPKKEDEQQVPN-SIWEDDFKAFFELTDEENPPRPPLQQPDYHFHDG 60

Query: 61  NVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----DPTHVPYMGEVPIMRMEEER 120
             MEN    +LNLNLNYEEVLEAWSDRGSLWA+A+     D TH PYMGEVP  RMEEER
Sbjct: 61  AFMENKNKISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVP--RMEEER 120

Query: 121 RRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIK 150
            RRV RYKEKRHTR+F KKIRYQVRKLNA++RPRIK
Sbjct: 121 TRRVLRYKEKRHTRLFSKKIRYQVRKLNAEKRPRIK 153

[Close]

BLAST of MELO3C035273 vs. NCBI nr
Match: XP_023520167.1 (zinc finger protein CONSTANS-LIKE 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-33
Identity = 104/207 (50.24%), Postives = 118/207 (57.00%), Query Frame = 0


Query: 6   MCYSWLVKSPKK---EVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD---------- 65
           M YS L+KSPKK   E +Q VP  SIW DDF+AFF+L++EE  PL  Q +          
Sbjct: 1   MGYSSLLKSPKKEGAEEEQEVPN-SIW-DDFKAFFELSNEEKLPLQQQENFSIVNGGPLN 60

Query: 66  ----------------------------------------CHFQDVNVMENNKVSNLNLN 125
                                                   C F    VME+ K ++LNLN
Sbjct: 61  WDLMDHHSNHQFSLSETKTNHSGHGDGVEAEVFSRVVPKACSFDGDGVMESKKKASLNLN 120

Query: 126 LNYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRM 156
           LNYEEV EAWS RGSLWA    S S+PTH  YMGEVP  RMEEER RRV RY+EKR TR+
Sbjct: 121 LNYEEVSEAWSGRGSLWAAGGSSPSNPTHNVYMGEVP--RMEEERTRRVLRYREKRLTRL 180

[Close]

BLAST of MELO3C035273 vs. ExPASy TrEMBL
Match: A0A0A0LYC0 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G533540 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.4e-62
Identity = 138/170 (81.18%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MEEREMCYSWLVKSPKKEV---QQLVPTP-SIWEDDFRAFFDLADEEN-PPLLHQPD-CH 60
           MEERE+C+SWLVKSPKKE+   QQ+VPTP SIWEDDFRAFFDL  EE  PP LH PD  H
Sbjct: 1   MEEREVCFSWLVKSPKKELLHEQQVVPTPSSIWEDDFRAFFDLTHEETPPPPLHHPDYYH 60

Query: 61  FQD-VN-VME-NNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----DPTHVPYMGEVPI 120
           FQ+ VN VME NNKVSNLNLNLNYEEVLEAWSDRGSLWA+AS     D TH PYMGEVPI
Sbjct: 61  FQNHVNDVMENNNKVSNLNLNLNYEEVLEAWSDRGSLWAAASSSHSNDSTHTPYMGEVPI 120

Query: 121 MRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD 157
           +RMEEERRRRVKRYKEKR  R+FCKKIRYQVRKLNADRRPRIKGRFVKTD
Sbjct: 121 IRMEEERRRRVKRYKEKRQARIFCKKIRYQVRKLNADRRPRIKGRFVKTD 170

[Close]

BLAST of MELO3C035273 vs. ExPASy TrEMBL
Match: A0A6J1HJ00 (zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC111464884 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.5e-33
Identity = 103/209 (49.28%), Postives = 118/209 (56.46%), Query Frame = 0


Query: 6   MCYSWLVKSPKK---EVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD---------- 65
           M YS L+KSPKK   E +Q VP  SIW DDF+AFF+L++EE  PL  Q +          
Sbjct: 1   MGYSSLLKSPKKEGEEEEQEVPN-SIW-DDFKAFFELSNEEKLPLQQQENFSIVNGGPLN 60

Query: 66  ------------------------------------------CHFQDVNVMENNKVSNLN 125
                                                     C F    VM++ K ++LN
Sbjct: 61  WDLMDHHSNHQFSLSETKANHGGHGYGIEAEAEAFSRVVPKACSFDGDGVMKSKKKASLN 120

Query: 126 LNLNYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHT 156
           LNLNYEEV EAWS RGSLWA    S S+PTH  YMGEVP  RMEEER RRV RY+EKR T
Sbjct: 121 LNLNYEEVSEAWSGRGSLWAGGGSSPSNPTHNVYMGEVP--RMEEERTRRVLRYREKRLT 180

[Close]

BLAST of MELO3C035273 vs. ExPASy TrEMBL
Match: A0A6J1I4F9 (zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita maxima OX=3661 GN=LOC111469554 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32
Identity = 96/206 (46.60%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 6   MCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD------------- 65
           M YS L+K  KKE ++    P+   DDF+AFF+L++EE  PL  Q +             
Sbjct: 1   MGYSSLLKGLKKEEEEEQEVPNSIRDDFKAFFELSNEEKLPLQQQENFSIVNGGSLNWDL 60

Query: 66  ---------------------------------------CHFQDVNVMENNKVSNLNLNL 125
                                                  C F    VM++ K ++LNLNL
Sbjct: 61  MDHHSNHQFSLSETKTNHGGHGDGVEAEAEVFSRVVPKACSFDGDGVMKSKKKASLNLNL 120

Query: 126 NYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMF 156
           NYEEV EAWS RGSLWA    S S+PTH  YMGEVP  RMEEER RRV RY+EKR TR+F
Sbjct: 121 NYEEVSEAWSGRGSLWAAGGSSPSNPTHNVYMGEVP--RMEEERTRRVLRYREKRLTRLF 180

[Close]

BLAST of MELO3C035273 vs. ExPASy TrEMBL
Match: A0A6J1DMX8 (zinc finger protein CONSTANS-LIKE 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022043 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 5.9e-27
Identity = 94/197 (47.72%), Postives = 109/197 (55.33%), Query Frame = 0


Query: 6   MCYSWLVKSPKKEVQQ-----------------LVPTPSIWEDDFRAFFDLAD------- 65
           M YSW +KSPK+E Q+                 L P P   ED+F A+    D       
Sbjct: 1   MGYSWFLKSPKEEEQEVPNGAVKGDFEAFLEDKLPPPPPEAEDNFLAYGGPPDWGLNFDY 60

Query: 66  EENP-PLLHQPD-----------------CHFQDVNVMENNKVSNLNLNLNYEEVLEAWS 125
           E  P P+L Q +                     D    E  ++S L LNLNYEEVLEAWS
Sbjct: 61  EYFPVPVLSQTNIVGANEEAAAAAAFGRVSDDGDGRKKEEEEIS-LKLNLNYEEVLEAWS 120

Query: 126 DRGSLWASASDP-----THVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVR 156
            RGSLWA+A D      T+  YMGEVP  R+EEERRRRV RYKEKRH R+F  KIRYQVR
Sbjct: 121 GRGSLWAAADDSSLSNLTNAAYMGEVP--RIEEERRRRVLRYKEKRHNRLFSNKIRYQVR 180

[Close]

BLAST of MELO3C035273 vs. ExPASy TrEMBL
Match: A0A2N9FHK6 (CCT domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14555 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 4.2e-25
Identity = 74/134 (55.22%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 28  IWEDDFRAFFDLADEENPPLLHQPDCHFQDVNVMENNKV-SNLNLNLNYEEVLEAWSDRG 87
           ++E+  + FF+  +EE+    +  D   +++ V++++++ ++LNLNLNYEEVL+AWS+RG
Sbjct: 90  VFENTKQCFFE--EEES---YYSKDIKRENIGVLDDDEMRASLNLNLNYEEVLDAWSNRG 149

Query: 88  SLWASASDPTHVP---YMGEVPIMRMEEERRRR---VKRYKEKRHTRMFCKKIRYQVRKL 147
           SLWA  S P+      YMGEVP+  MEEER RR   V RYKEKR TR+F KKIRYQVRKL
Sbjct: 150 SLWADDSSPSMASNGNYMGEVPV--MEEERTRREASVLRYKEKRQTRLFSKKIRYQVRKL 209

Query: 148 NADRRPRIKGRFVK 155
           NAD+RPR+KGRFVK
Sbjct: 210 NADKRPRLKGRFVK 216

[Close]

BLAST of MELO3C035273 vs. TAIR 10
Match: AT1G07050.1 (CCT motif family protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 62/138 (44.93%), Postives = 81/138 (58.70%), Query Frame = 0


Query: 25  TPSIWEDDFRAFFDLADEENPPLLHQPDCHF---QDVNVMENNKVSNLNLNLNYEEVLEA 84
           T   WE+D     D+ +EE      Q    F   ++      +K   L LNLN++EV++A
Sbjct: 59  TWDFWEEDEDE--DVGEEEKRSSTDQEGSSFGFWENKPTDYEDKDLGLKLNLNHQEVIDA 118

Query: 85  WSD-RGSLWASASDPTHVPYMGEVPIMRMEEERRRR--VKRYKEKRHTRMFCKKIRYQVR 144
           WSD +  LW   S   +  Y GEVP++  +   RR   V RYKEKR +R+F KKIRYQVR
Sbjct: 119 WSDHQKPLWTDTSTLDNSVYRGEVPVIEEKRNMRREASVLRYKEKRQSRLFSKKIRYQVR 178

Query: 145 KLNADRRPRIKGRFVKTD 157
           KLNAD+RPR KGRFVK +
Sbjct: 179 KLNADKRPRFKGRFVKRE 194

[Close]

BLAST of MELO3C035273 vs. TAIR 10
Match: AT5G14370.1 (CCT motif family protein )

HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16
Identity = 51/115 (44.35%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 63  NNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYM----------GE------VPI 122
           N+   +L L L+YE+++EAWSD+G+L+     P  VP +          GE      VP 
Sbjct: 223 NDGRPSLALKLDYEQIMEAWSDKGTLYVDGEPPQTVPDLHASADGFNDGGEAGNLWAVPE 282

Query: 123 MRMEE-----ERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD 157
           M   E      R   + RYKEKR  R+F K+IRYQVRKLNA++RPR+KGRFVK +
Sbjct: 283 METTERLWRGHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKRE 337

[Close]

BLAST of MELO3C035273 vs. TAIR 10
Match: AT4G25990.1 (CCT motif family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14
Identity = 51/104 (49.04%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 57  DVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWAS---ASDPTHVPY---MGEVPIMRME 116
           D N     +VS L L L+Y+ VLEAWS + S ++     SD   V +   +GE+ +    
Sbjct: 280 DSNPKLEQRVSPL-LKLDYDGVLEAWSGKESPFSDEILGSDADGVDFHVRLGEIDLFGES 339

Query: 117 EERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK 155
             R   V RYKEKR  R+F KKIRYQVRKLNAD+RPR+KGRFV+
Sbjct: 340 GMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVR 382

[Close]

BLAST of MELO3C035273 vs. TAIR 10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14
Identity = 48/121 (39.67%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 58  VNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYMGEVPIMRMEEE----- 117
           V V E    + L L LNY+ V+  W  +G  W+S   P     +   P   M E      
Sbjct: 282 VKVKEEEHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGEST 341

Query: 118 -------------------RRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFV 155
                              R  RV RY+EKR TR+F KKIRY+VRKLNA++RPR+KGRFV
Sbjct: 342 HQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFV 401

[Close]

BLAST of MELO3C035273 vs. TAIR 10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 74.3 bits (181), Expect = 9.6e-14
Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 62  ENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDP-------THVPYM-----------GE 121
           + ++ ++L L L+Y  V+ AW + GS W +   P       T +P++           G 
Sbjct: 270 DKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGS 329

Query: 122 VPIMR------MEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK 155
           V   +       + ER  RV RYKEKR TR+F KKIRY+VRKLNA++RPRIKGRFVK
Sbjct: 330 VTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVK 386

The following BLAST results are available for this feature:

BLAST of MELO3C035273 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWD0	3.6e-13	39.67	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q9LU68	1.4e-12	51.14	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
Q9C9A9	1.4e-12	41.88	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q8LG76	2.6e-11	39.67	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9M9B3	2.8e-10	46.15	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]

BLAST of MELO3C035273 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65847.1	1.5e-61	81.18	hypothetical protein Csa_023240 [Cucumis sativus]	[more]
XP_038893946.1	1.1e-54	74.69	zinc finger protein CONSTANS-LIKE 7 isoform X3 [Benincasa hispida]	[more]
XP_038893945.1	2.4e-51	72.96	zinc finger protein CONSTANS-LIKE 7 isoform X2 [Benincasa hispida]	[more]
XP_038893944.1	5.4e-51	73.72	zinc finger protein CONSTANS-LIKE 16 isoform X1 [Benincasa hispida]	[more]
XP_023520167.1	1.0e-33	50.24	zinc finger protein CONSTANS-LIKE 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C035273 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYC0	7.4e-62	81.18	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G533540 PE=4 SV...	[more]
A0A6J1HJ00	2.5e-33	49.28	zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC11146488...	[more]
A0A6J1I4F9	3.6e-32	46.60	zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita maxima OX=3661 GN=LOC111469554 ...	[more]
A0A6J1DMX8	5.9e-27	47.72	zinc finger protein CONSTANS-LIKE 6 isoform X1 OS=Momordica charantia OX=3673 GN...	[more]
A0A2N9FHK6	4.2e-25	55.22	CCT domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14555 PE=4...	[more]

BLAST of MELO3C035273 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07050.1	1.4e-20	44.93	CCT motif family protein	[more]
AT5G14370.1	3.5e-16	44.35	CCT motif family protein	[more]
AT4G25990.1	1.5e-14	49.04	CCT motif family protein	[more]
AT1G25440.1	2.5e-14	39.67	B-box type zinc finger protein with CCT domain	[more]
AT1G73870.1	9.6e-14	41.88	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 113..155 e-value: 2.9E-17 score: 62.5
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 113..155 score: 15.249157
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 60..155
None	No IPR available	PANTHER	PTHR31874:SF41	CCT MOTIF FAMILY PROTEIN	coord: 60..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035273.1	MELO3C035273.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding