MELO3C035149 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035149
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr11: 24356017 .. 24356348 (+)
RNA-Seq Expression	MELO3C035149
Synteny	MELO3C035149

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTCAGGAATGCCCCTTTTCCCGACGCTTTTAGGGGGATTTCCCGACGCCGCGACACTGCGTCGGGAAATCCCCTTTTTAATCGTTTCAGTTCTGTAATTTACAAAACCGAAACCGAGAGGGAAAACGAGAGGAGAAGCCGAGAGGGGAGAAGAGAGAATCGTCGTTGCCGTTCCGTGTTCTGCCGCCGTCGCTCGCCGTCGTCCCTTGTCGCCGTTCAGCCGCCGTCTGCCACTTTAGGTAAGTGGAAGTTTAAATTTTATTTAGTTTAAATTTAGATTTTTGTTTGTTAAAAGAAAAGGAAAATGAAGATAAATTAGGAAACTGA

mRNA sequence

ATGAGCGTCAGGAATGCCCCTTTTCCCGACGCTTTTAGGGGGATTTCCCGACGCCGCGACACTGCGTCGGGAAATCCCCTTTTTAATCGTTTCAGTTCTGTAATTTACAAAACCGAAACCGAGAGGGAAAACGAGAGGAGAAGCCGAGAGGGGAGAAGAGAGAATCGTCGTTGCCGTTCCGTGTTCTGCCGCCGTCGCTCGCCGTCGTCCCTTGTCGCCGTTCAGCCGCCGTCTGCCACTTTAGATTTTTGTTTGTTAAAAGAAAAGGAAAATGAAGATAAATTAGGAAACTGA

Coding sequence (CDS)

ATGAGCGTCAGGAATGCCCCTTTTCCCGACGCTTTTAGGGGGATTTCCCGACGCCGCGACACTGCGTCGGGAAATCCCCTTTTTAATCGTTTCAGTTCTGTAATTTACAAAACCGAAACCGAGAGGGAAAACGAGAGGAGAAGCCGAGAGGGGAGAAGAGAGAATCGTCGTTGCCGTTCCGTGTTCTGCCGCCGTCGCTCGCCGTCGTCCCTTGTCGCCGTTCAGCCGCCGTCTGCCACTTTAGATTTTTGTTTGTTAAAAGAAAAGGAAAATGAAGATAAATTAGGAAACTGA

Protein sequence

MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRSVFCRRRSPSSLVAVQPPSATLDFCLLKEKENEDKLGN

Homology

[Close]

BLAST of MELO3C035149 vs. NCBI nr
Match: KAA0054714.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 163.3 bits (412), Expect = 1.0e-36
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60
          MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS
Sbjct: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60

Query: 61 VFCRRRSPSSLVAVQPPSATLDFCLLKEKENED 94
          VFCRRRSPSSLVAVQPPSATLD   L+ +++ D
Sbjct: 61 VFCRRRSPSSLVAVQPPSATLDDMFLQFEDDLD 93

[Close]

BLAST of MELO3C035149 vs. NCBI nr
Match: KAA0057011.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 3.4e-27
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 2   SVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRSV 61
           S+ NAP+PDAFRGISRRR TASGN LFNRFSSVIY+TETER  +RRSREGRRENRR RSV
Sbjct: 75  SIGNAPYPDAFRGISRRRGTASGNLLFNRFSSVIYRTETERGIKRRSREGRRENRRSRSV 134

Query: 62  FCRRRSPSSLVAVQPPSATL 82
           FCRRRSPSSL AVQPPSATL
Sbjct: 135 FCRRRSPSSLAAVQPPSATL 154

[Close]

BLAST of MELO3C035149 vs. NCBI nr
Match: KAA0040895.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 119.4 bits (298), Expect = 1.7e-23
Identity = 69/97 (71.13%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60
          MS+ NAPF DAFRGISRRRDTASGN LFN FSSVIY+T+TERE    SREGRRENRR RS
Sbjct: 1  MSIGNAPFYDAFRGISRRRDTASGNLLFNHFSSVIYRTKTERE----SREGRRENRRRRS 60

Query: 61 VFCRRRSPSS----LVAVQPPSATLDFCLLKEKENED 94
          VFCRRRSP S    L AVQPPSATL    L+ +++ D
Sbjct: 61 VFCRRRSPPSLAAVLAAVQPPSATLGDMFLQFEDDLD 93

[Close]

BLAST of MELO3C035149 vs. NCBI nr
Match: TYK10637.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 6.5e-23
Identity = 67/85 (78.82%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60
          MS+ NAPF DAFRGISRRRDTASGN LFN FSSVIY+T+TERE    SREGRRENRR RS
Sbjct: 1  MSIGNAPFYDAFRGISRRRDTASGNLLFNHFSSVIYRTKTERE----SREGRRENRRRRS 60

Query: 61 VFCRRRSPSS----LVAVQPPSATL 82
          VFCRRRSP S    L AVQPPSATL
Sbjct: 61 VFCRRRSPPSLAAVLAAVQPPSATL 81

[Close]

BLAST of MELO3C035149 vs. NCBI nr
Match: TYK26661.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 7.5e-19
Identity = 56/71 (78.87%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60
          MSV N PFPDAFRGISRRR TASGNPLFN FSSVIY+TETERENERR+REGRRENR CR 
Sbjct: 1  MSVGNDPFPDAFRGISRRRGTASGNPLFNHFSSVIYRTETERENERRNREGRRENRHCRP 60

Query: 61 VFCRRRSPSSL 72
          +      PSSL
Sbjct: 61 L------PSSL 65

[Close]

BLAST of MELO3C035149 vs. ExPASy TrEMBL
Match: A0A5A7UHT7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005410 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.0e-37
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60
          MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS
Sbjct: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60

Query: 61 VFCRRRSPSSLVAVQPPSATLDFCLLKEKENED 94
          VFCRRRSPSSLVAVQPPSATLD   L+ +++ D
Sbjct: 61 VFCRRRSPSSLVAVQPPSATLDDMFLQFEDDLD 93

[Close]

BLAST of MELO3C035149 vs. ExPASy TrEMBL
Match: A0A5A7UU28 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001930 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.6e-27
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 2   SVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRSV 61
           S+ NAP+PDAFRGISRRR TASGN LFNRFSSVIY+TETER  +RRSREGRRENRR RSV
Sbjct: 75  SIGNAPYPDAFRGISRRRGTASGNLLFNRFSSVIYRTETERGIKRRSREGRRENRRSRSV 134

Query: 62  FCRRRSPSSLVAVQPPSATL 82
           FCRRRSPSSL AVQPPSATL
Sbjct: 135 FCRRRSPSSLAAVQPPSATL 154

[Close]

BLAST of MELO3C035149 vs. ExPASy TrEMBL
Match: A0A5A7THM5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00040 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.3e-24
Identity = 69/97 (71.13%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60
          MS+ NAPF DAFRGISRRRDTASGN LFN FSSVIY+T+TERE    SREGRRENRR RS
Sbjct: 1  MSIGNAPFYDAFRGISRRRDTASGNLLFNHFSSVIYRTKTERE----SREGRRENRRRRS 60

Query: 61 VFCRRRSPSS----LVAVQPPSATLDFCLLKEKENED 94
          VFCRRRSP S    L AVQPPSATL    L+ +++ D
Sbjct: 61 VFCRRRSPPSLAAVLAAVQPPSATLGDMFLQFEDDLD 93

[Close]

BLAST of MELO3C035149 vs. ExPASy TrEMBL
Match: A0A5D3CF83 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001200 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.2e-23
Identity = 67/85 (78.82%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60
          MS+ NAPF DAFRGISRRRDTASGN LFN FSSVIY+T+TERE    SREGRRENRR RS
Sbjct: 1  MSIGNAPFYDAFRGISRRRDTASGNLLFNHFSSVIYRTKTERE----SREGRRENRRRRS 60

Query: 61 VFCRRRSPSS----LVAVQPPSATL 82
          VFCRRRSP S    L AVQPPSATL
Sbjct: 61 VFCRRRSPPSLAAVLAAVQPPSATL 81

[Close]

BLAST of MELO3C035149 vs. ExPASy TrEMBL
Match: A0A5D3DSC7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003160 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.6e-19
Identity = 56/71 (78.87%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MSVRNAPFPDAFRGISRRRDTASGNPLFNRFSSVIYKTETERENERRSREGRRENRRCRS 60
          MSV N PFPDAFRGISRRR TASGNPLFN FSSVIY+TETERENERR+REGRRENR CR 
Sbjct: 1  MSVGNDPFPDAFRGISRRRGTASGNPLFNHFSSVIYRTETERENERRNREGRRENRHCRP 60

Query: 61 VFCRRRSPSSL 72
          +      PSSL
Sbjct: 61 L------PSSL 65

The following BLAST results are available for this feature:

BLAST of MELO3C035149 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035149 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054714.1	1.0e-36	90.32	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0057011.1	3.4e-27	86.25	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0040895.1	1.7e-23	71.13	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK10637.1	6.5e-23	78.82	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK26661.1	7.5e-19	78.87	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C035149 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHT7	5.0e-37	90.32	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7UU28	1.6e-27	86.25	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7THM5	8.3e-24	71.13	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3CF83	3.2e-23	78.82	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DSC7	3.6e-19	78.87	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C035149 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035149.1	MELO3C035149.1	mRNA