
MELO3C035136 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCTTCCAACTTCTTCCTCATCGCTCCCTACTTTTCCTTTCTCTTTTCTTCTACTTCTAAAATAAACCTCCAGACTCTTATTTCCAAACCCAAATTTACCACAAAATTTGATACTTACGTTATTAAAACTATCACAATTTGCATTCTCTTAAAGAGAAATGAAGGAGATTAGTGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGCAAGCTTCTCCGCCGTAGATGTGCTCAAGATTGCGTTTTCGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGCGTTCATAAGGTCTTTGGAGCTAGTAATGTTAACAAGATGTTACAGGTTAGTAACTCAAATTATGATTCCTTAGATACACATTGGTTTAGTTTCTCTCTTCTTTTGAATGATTCATTTTCTTTCTCCCTTATGTTTAATTTGGTAATGTAATTAAACTAGTTTCTTTTTGATTGAAGGAAGTTTGGATTATTATAGAAGTGAGAGAGACTTGAATTTTGGCTTAACCTACTGCAGTAAACTCAAATTAGCGGTTAATTAAAATAATTAGTTAGATCATTTGTAGCCAATGAGGAGCCAACCATTCTATATTATCATATTATCCCTACTAACCACACACAAATTGACAAAACAGCCCACAATAACTTAAAAGAGAGAGAGAGA CATCTTCCAACTTCTTCCTCATCGCTCCCTACTTTTCCTTTCTCTTTTCTTCTACTTCTAAAATAAACCTCCAGACTCTTATTTCCAAACCCAAATTTACCACAAAATTTGATACTTACGTTATTAAAACTATCACAATTTGCATTCTCTTAAAGAGAAATGAAGGAGATTAGTGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGCAAGCTTCTCCGCCGTAGATGTGCTCAAGATTGCGTTTTCGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGCGTTCATAAGGTCTTTGGAGCTAGTAATGTTAACAAGATGTTACAGGAAGTTTGGATTATTATAGAAGTGAGAGAGACTTGAATTTTGGCTTAACCTACTGCAGTAAACTCAAATTAGCGGTTAATTAAAATAATTAGTTAGATCATTTGTAGCCAATGAGGAGCCAACCATTCTATATTATCATATTATCCCTACTAACCACACACAAATTGACAAAACAGCCCACAATAACTTAAAAGAGAGAGAGAGA ATGAAGGAGATTAGTGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGCAAGCTTCTCCGCCGTAGATGTGCTCAAGATTGCGTTTTCGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGCGTTCATAAGGTCTTTGGAGCTAGTAATGTTAACAAGATGTTACAGGAAGTTTGGATTATTATAGAAGTGAGAGAGACTTGA MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQEVWIIIEVRET Homology
BLAST of MELO3C035136 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.0e-23 Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 1.8e-20 Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.5e-19 Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 1.3e-18 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy Swiss-Prot
Match: Q9AT61 (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2) HSP 1 Score: 89.7 bits (221), Expect = 1.4e-17 Identity = 39/52 (75.00%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C035136 vs. NCBI nr
Match: XP_004150042.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN46813.1 hypothetical protein Csa_020952 [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MELO3C035136 vs. NCBI nr
Match: KAA0054642.1 (LOB domain-containing protein 4-like [Cucumis melo var. makuwa] >TYK08620.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MELO3C035136 vs. NCBI nr
Match: XP_038902133.1 (LOB domain-containing protein 4-like [Benincasa hispida]) HSP 1 Score: 131.7 bits (330), Expect = 2.5e-27 Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MELO3C035136 vs. NCBI nr
Match: XP_004294159.1 (PREDICTED: LOB domain-containing protein 4 [Fragaria vesca subsp. vesca]) HSP 1 Score: 124.0 bits (310), Expect = 5.2e-25 Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of MELO3C035136 vs. NCBI nr
Match: XP_024159586.1 (LOB domain-containing protein 4 [Rosa chinensis] >PRQ30578.1 putative transcription factor AS2-LOB family [Rosa chinensis]) HSP 1 Score: 124.0 bits (310), Expect = 5.2e-25 Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy TrEMBL
Match: A0A5D3CBA3 (LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00510 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.4e-28 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy TrEMBL
Match: A0A0A0KBA8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139130 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.4e-28 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy TrEMBL
Match: A0A2P6Q8S7 (Putative transcription factor AS2-LOB family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0026191 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.5e-25 Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy TrEMBL
Match: A0A6J1D8X3 (LOB domain-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111017996 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 7.3e-25 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of MELO3C035136 vs. ExPASy TrEMBL
Match: A0A5J5A203 (LOB domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_009874 PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.6e-24 Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of MELO3C035136 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 ) HSP 1 Score: 108.6 bits (270), Expect = 2.1e-24 Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 0
BLAST of MELO3C035136 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21 Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of MELO3C035136 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 ) HSP 1 Score: 96.3 bits (238), Expect = 1.1e-20 Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of MELO3C035136 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 ) HSP 1 Score: 93.2 bits (230), Expect = 9.1e-20 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C035136 vs. TAIR 10
Match: AT2G30340.1 (LOB domain-containing protein 13 ) HSP 1 Score: 89.7 bits (221), Expect = 1.0e-18 Identity = 39/52 (75.00%), Postives = 47/52 (90.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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