MELO3C035134 (gene) Melon (DHL92) v4

Overview
NameMELO3C035134
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionNBS-LRR type resistance protein
Locationchr01: 16805162 .. 16806338 (-)
RNA-Seq ExpressionMELO3C035134
SyntenyMELO3C035134
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAATCATTCAAAGACCGGTTGTGCGTCATGTCACTGACGACTTAATCCACGATGTGGATGAACACTTGTCACATGCAAGCGATGACGAATTATAGTGACAAACCACGTACCCACATATTTATCTAGTTTATATATTTTGATTCTAGCTATGTGTTCGTATTTGCTTATTGAATGTTTGTTTTCTATGTCCACAGCCATTATGTCATATCGACGTAATAATTTTATGGAGATGGACGATATGTTCCTCAAGTTTTAGGATAATTTAGATAACATCGTGGGAGGGTCGTCATCTGTGAGTGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTAACTTACAATTATTTCATGTTCTTTTTTCTAACTTTATATGTTATTATCGATTTATTAAGTAGGGTCTTCTTCTCAACAAGCGACTCCGACTTCTAGGAGACATGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGTAATAAATGGACGCATTCCGATGACGATCGCCCTTGGAGCGGAGAAGCCTATTTTTCCACACACCGTTCGCTTCAGCCAGGCGATAGCCGTGTGCGTGCGAAAGACATTTTCCGTCCGCTGTCTTAAGTAGGCGGACGTTGGGAGAGAATACATTGTGGTCGTCAAGGGCGACCTCCAGGTAATTAAATGCACTACACACTTTAACTAATCTAATGTGTTATGTTTATAATGTATAGCAATTGTTTGTGCTTGATTTCAATGATTAAGCAATGAACAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCGGGTCGACTGTCACAGACATTTCAAAAAGTACAGCGACCTGGAGGAGGCTCTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGACACTTCCTCTGCGACCACTATATCAGTCGTGCATTTCAGGTATTTGTCATGATTAATTATGATAACAAGTTTGAATATGTATAAGAAATAAACAAATAAACAATATAATTTTTTAATGCAGGAGCAATCACGGACGAACAAGGCTACTAGACAGAAGTAGCCTTACAATCATAGTAGAGGGTCCAAGTCATTTCTACAATGACAGTACGAGCTCGCTGAGAGAAAAGAGGAGCCGGTCGATCGTGTGGAGTTGTTCCAAAAAACACATGTTCGAGCTGGGACGTTCAT

mRNA sequence

ACAATCATTCAAAGACCGGTTGTGCGTCATGTCACTGACGACTTAATCCACGATGTGGATGAACACTTGTCACATGCAAGCGATGACGAATTATAGTGACAAACCACCCATTATGTCATATCGACGTAATAATTTTATGGAGATGGACGATATGTTCCTCAAGTTTTAGGATAATTTAGATAACATCGTGGGAGGGTCGTCATCTGTGAGTGACAATACGGGGTCTTCTTCTCAACAAGCGACTCCGACTTCTAGGAGACATGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGTAATAAATGGACGCATTCCGATGACGATCGCCCTTGGAGCGGAGAAGCCTATTTTTCCACACACCGTTCGCTTCAGCCAGGCGATAGCCGTGTGCGTGCGAAAGACATTTTCCGTCCGCTGTCTTAAGTAGGCGGACGTTGGGAGAGAATACATTGTGGTCGTCAAGGGCGACCTCCAGGTCGACTGTCACAGACATTTCAAAAAGTACAGCGACCTGGAGGAGGCTCTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGACACTTCCTCTGCGACCACTATATCAGTCGTGCATTTCAGGAGCAATCACGGACGAACAAGGCTACTAGACAGAAGTAGCCTTACAATCATAGTAGAGGGTCCAAGTCATTTCTACAATGACAGTACGAGCTCGCTGAGAGAAAAGAGGAGCCGGTCGATCGTGTGGAGTTGTTCCAAAAAACACATGTTCGAGCTGGGACGTTCAT

Coding sequence (CDS)

ATGAGGATTGACACTTCCTCTGCGACCACTATATCAGTCGTGCATTTCAGGAGCAATCACGGACGAACAAGGCTACTAGACAGAAGTAGCCTTACAATCATAGTAGAGGGTCCAAGTCATTTCTACAATGACAGTACGAGCTCGCTGAGAGAAAAGAGGAGCCGGTCGATCGTGTGGAGTTGTTCCAAAAAACACATGTTCGAGCTGGGACGTTCA

Protein sequence

MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWSCSKKHMFELGRS
Homology
[Close]
BLAST of MELO3C035134 vs. NCBI nr
Match: ADN34241.1 (NBS-LRR type resistance protein [Cucumis melo subsp. melo])

HSP 1 Score: 118.2 bits (295), Expect = 2.8e-23
Identity = 59/72 (81.94%), Postives = 63/72 (87.50%), Query Frame = 0 

Query: 1  MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWS 60
          MRIDTSSAT IS VH RSNH RTRLLDRSSLTIIV GPSHFYNDS SSL+E+ SRSIVW+
Sbjct: 1  MRIDTSSATIISAVHSRSNHRRTRLLDRSSLTIIVAGPSHFYNDSMSSLKEEGSRSIVWN 60

Query: 61 CSKKHMFELGRS 73
          CS+KH FELG S
Sbjct: 61 CSEKHTFELGHS 72

[Close]
BLAST of MELO3C035134 vs. NCBI nr
Match: KAA0036833.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ95900.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 2.4e-22
Identity = 58/72 (80.56%), Postives = 61/72 (84.72%), Query Frame = 0 

Query: 1   MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWS 60
           MRI TSS T IS VH RSNHGRTRLLDRSSLTIIVEGPS FYNDS SSL+E+ SRSIVW+
Sbjct: 121 MRIGTSSTTIISAVHSRSNHGRTRLLDRSSLTIIVEGPSRFYNDSMSSLKEEGSRSIVWN 180

Query: 61  CSKKHMFELGRS 73
           CS KH FELG S
Sbjct: 181 CSGKHTFELGHS 192

[Close]
BLAST of MELO3C035134 vs. NCBI nr
Match: KAA0033763.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK22372.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 3.5e-21
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0 

Query: 1   MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI 58
           MRIDTSSATTIS VHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI
Sbjct: 192 MRIDTSSATTISAVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI 248

[Close]
BLAST of MELO3C035134 vs. NCBI nr
Match: TYK08760.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 1   MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWS 60
           MRI TSS T IS +H RSNHG+TRLLDRSSLTIIV GPS FYNDS SSL+E+ SRS+VW+
Sbjct: 128 MRIGTSSTTIISAMHSRSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEASRSVVWN 187

Query: 61  CSKKHMFELGRS 73
           CS KH FELG S
Sbjct: 188 CSGKHTFELGYS 199

[Close]
BLAST of MELO3C035134 vs. NCBI nr
Match: KAA0040675.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 1   MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWS 60
           MRI TSS T IS +H RSNHG+TRLLDRSSLTIIV GPS FYNDS SSL+E+ SRS+VW+
Sbjct: 128 MRIGTSSTTIISAMHSRSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEGSRSVVWN 187

Query: 61  CSKKHMFELGRS 73
           CS KH FELG S
Sbjct: 188 CSGKHTFELGYS 199

[Close]
BLAST of MELO3C035134 vs. ExPASy TrEMBL
Match: E5GCP2 (NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23
Identity = 59/72 (81.94%), Postives = 63/72 (87.50%), Query Frame = 0 

Query: 1  MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWS 60
          MRIDTSSAT IS VH RSNH RTRLLDRSSLTIIV GPSHFYNDS SSL+E+ SRSIVW+
Sbjct: 1  MRIDTSSATIISAVHSRSNHRRTRLLDRSSLTIIVAGPSHFYNDSMSSLKEEGSRSIVWN 60

Query: 61 CSKKHMFELGRS 73
          CS+KH FELG S
Sbjct: 61 CSEKHTFELGHS 72

[Close]
BLAST of MELO3C035134 vs. ExPASy TrEMBL
Match: A0A5A7T1N6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002030 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 58/72 (80.56%), Postives = 61/72 (84.72%), Query Frame = 0 

Query: 1   MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWS 60
           MRI TSS T IS VH RSNHGRTRLLDRSSLTIIVEGPS FYNDS SSL+E+ SRSIVW+
Sbjct: 121 MRIGTSSTTIISAVHSRSNHGRTRLLDRSSLTIIVEGPSRFYNDSMSSLKEEGSRSIVWN 180

Query: 61  CSKKHMFELGRS 73
           CS KH FELG S
Sbjct: 181 CSGKHTFELGHS 192

[Close]
BLAST of MELO3C035134 vs. ExPASy TrEMBL
Match: A0A5D3DFK0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00960 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-21
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0 

Query: 1   MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI 58
           MRIDTSSATTIS VHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI
Sbjct: 192 MRIDTSSATTISAVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSI 248

[Close]
BLAST of MELO3C035134 vs. ExPASy TrEMBL
Match: A0A5D3CBP1 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00090 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.4e-21
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 1   MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWS 60
           MRI TSS T IS +H RSNHG+TRLLDRSSLTIIV GPS FYNDS SSL+E+ SRS+VW+
Sbjct: 128 MRIGTSSTTIISAMHSRSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEASRSVVWN 187

Query: 61  CSKKHMFELGRS 73
           CS KH FELG S
Sbjct: 188 CSGKHTFELGYS 199

[Close]
BLAST of MELO3C035134 vs. ExPASy TrEMBL
Match: A0A5A7TGV8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold540G00120 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.4e-21
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = 0 

Query: 1   MRIDTSSATTISVVHFRSNHGRTRLLDRSSLTIIVEGPSHFYNDSTSSLREKRSRSIVWS 60
           MRI TSS T IS +H RSNHG+TRLLDRSSLTIIV GPS FYNDS SSL+E+ SRS+VW+
Sbjct: 128 MRIGTSSTTIISAMHSRSNHGQTRLLDRSSLTIIVAGPSRFYNDSMSSLKEEGSRSVVWN 187

Query: 61  CSKKHMFELGRS 73
           CS KH FELG S
Sbjct: 188 CSGKHTFELGYS 199

The following BLAST results are available for this feature:
BLAST of MELO3C035134 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN34241.12.8e-2381.94NBS-LRR type resistance protein [Cucumis melo subsp. melo][more]
KAA0036833.12.4e-2280.56NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ95900.1 NBS-LRR t... [more]
KAA0033763.13.5e-2198.25CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK22372.1 CACTA en-... [more]
TYK08760.11.3e-2075.00NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0040675.11.7e-2075.00NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C035134 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035134 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E5GCP21.4e-2381.94NBS-LRR type resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A5A7T1N61.2e-2280.56NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3DFK01.7e-2198.25CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3CBP16.4e-2175.00NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TGV88.4e-2175.00NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
BLAST of MELO3C035134 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035134.1MELO3C035134.1mRNA