MELO3C035128 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035128
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	L10-interacting MYB domain-containing protein-like
Location	chr11: 23105159 .. 23105476 (-)
RNA-Seq Expression	MELO3C035128
Synteny	MELO3C035128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTACCATCAATTTTGAAGATGAGCAATGGGACGAGCTTTTTAAGGTATAATAGTTGCATTTTATTTTTTCCATTTCTAATCATCTATAGGCGACTAAGAGAACAAAAAAATTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGAATTTTTGGAGGTACTACTGCAATAGGTATAAATGTTTGCCCGTCAACAAGACTTATTTCAGATTTTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATGATATAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGATGA

mRNA sequence

GGTACCATCAATTTTGAAGATGAGCAATGGGACGAGCTTTTTAAGGCGACTAAGAGAACAAAAAAATTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGAATTTTTGGAGGTACTACTGCAATAGGTATAAATGTTTGCCCGTCAACAAGACTTATTTCAGATTTTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATGATATAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGATGA

Coding sequence (CDS)

GGTACCATCAATTTTGAAGATGAGCAATGGGACGAGCTTTTTAAGGCGACTAAGAGAACAAAAAAATTTAGAAAAAGTGGTTGCCCACATTATGAAAAGCTCGTAAGAATTTTTGGAGGTACTACTGCAATAGGTATAAATGTTTGCCCGTCAACAAGACTTATTTCAGATTTTGAAGATGAAAATGAAAATGATGTTGCAAGCAACACAAACGTTGGTGTTGAAGAGAATGATATAGGAAAAAGCAAAAAACGAGTTCGAAGAAATAGATGA

Protein sequence

GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFEDENENDVASNTNVGVEENDIGKSKKRVRRNR

Homology

[Close]

BLAST of MELO3C035128 vs. NCBI nr
Match: TYK04836.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-35
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTAIG+N CPSTRLIS+ ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTAIGVNACPSTRLISNSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           +NENDVASNTNVGVEEND GKSKKRVRRNR
Sbjct: 71  QNENDVASNTNVGVEENDKGKSKKRVRRNR 100

[Close]

BLAST of MELO3C035128 vs. NCBI nr
Match: KAA0062192.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 2.0e-34
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTAIG+N CPSTRLIS+ ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTAIGVNACPSTRLISNSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           +NENDVASNTNVGVEEND GKSKKRV RN+
Sbjct: 71  QNENDVASNTNVGVEENDKGKSKKRVGRNK 100

[Close]

BLAST of MELO3C035128 vs. NCBI nr
Match: KAA0053615.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-33
Identity = 74/90 (82.22%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTA G+N CPSTRLISD ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           ENENDVASNTNVGVEEN+ GKSKKR RR +
Sbjct: 71  ENENDVASNTNVGVEENNKGKSKKRFRRKK 100

[Close]

BLAST of MELO3C035128 vs. NCBI nr
Match: TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-33
Identity = 74/90 (82.22%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTA G+N CPSTRLISD ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           ENENDVASNTNVGVEEN+ GKSKKR RR +
Sbjct: 71  ENENDVASNTNVGVEENNKGKSKKRFRRKK 100

[Close]

BLAST of MELO3C035128 vs. NCBI nr
Match: KAA0061221.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-33
Identity = 74/90 (82.22%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTA G+N CPSTRLISD ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           ENENDVASNTNVGVEEN+ GKSKKR RR +
Sbjct: 71  ENENDVASNTNVGVEENNKGKSKKRFRRKK 100

[Close]

BLAST of MELO3C035128 vs. ExPASy TrEMBL
Match: A0A5D3C321 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00140 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.7e-36
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTAIG+N CPSTRLIS+ ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTAIGVNACPSTRLISNSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           +NENDVASNTNVGVEEND GKSKKRVRRNR
Sbjct: 71  QNENDVASNTNVGVEENDKGKSKKRVRRNR 100

[Close]

BLAST of MELO3C035128 vs. ExPASy TrEMBL
Match: A0A5A7V1U9 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005860 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 9.7e-35
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTAIG+N CPSTRLIS+ ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTAIGVNACPSTRLISNSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           +NENDVASNTNVGVEEND GKSKKRV RN+
Sbjct: 71  QNENDVASNTNVGVEENDKGKSKKRVGRNK 100

[Close]

BLAST of MELO3C035128 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.8e-34
Identity = 74/90 (82.22%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTA G+N CPSTRLISD ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           ENENDVASNTNVGVEEN+ GKSKKR RR +
Sbjct: 71  ENENDVASNTNVGVEENNKGKSKKRFRRKK 100

[Close]

BLAST of MELO3C035128 vs. ExPASy TrEMBL
Match: A0A5D3DBS2 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00630 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.8e-34
Identity = 74/90 (82.22%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTA G+N CPSTRLISD ED
Sbjct: 83  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSED 142

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           ENENDVASNTNVGVEEN+ GKSKKR RR +
Sbjct: 143 ENENDVASNTNVGVEENNKGKSKKRFRRKK 172

[Close]

BLAST of MELO3C035128 vs. ExPASy TrEMBL
Match: A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.8e-34
Identity = 74/90 (82.22%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 1   GTINFEDEQWDELFKATKRTKKFRKSGCPHYEKLVRIFGGTTAIGINVCPSTRLISDFED 60
           GTIN E+EQW+ELFK  KR KKFRKSGCPHYEKLVRIFG TTA G+N CPSTRLISD ED
Sbjct: 11  GTINLEEEQWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSED 70

Query: 61  ENENDVASNTNVGVEENDIGKSKKRVRRNR 91
           ENENDVASNTNVGVEEN+ GKSKKR RR +
Sbjct: 71  ENENDVASNTNVGVEENNKGKSKKRFRRKK 100

The following BLAST results are available for this feature:

BLAST of MELO3C035128 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035128 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04836.1	1.4e-35	85.56	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
KAA0062192.1	2.0e-34	83.33	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
KAA0053615.1	1.0e-33	82.22	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYJ96795.1	1.0e-33	82.22	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T...	[more]
KAA0061221.1	1.0e-33	82.22	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C035128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C321	6.7e-36	85.56	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7V1U9	9.7e-35	83.33	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3BNQ5	4.8e-34	82.22	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3DBS2	4.8e-34	82.22	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C535	4.8e-34	82.22	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of MELO3C035128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035128.1	MELO3C035128.1	mRNA