MELO3C035121 (gene) Melon (DHL92) v4

Overview
NameMELO3C035121
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRibonuclease H
Locationchr11: 22315599 .. 22324040 (+)
RNA-Seq ExpressionMELO3C035121
SyntenyMELO3C035121
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTCGTCAGCCCCTTTTCTTCGACGACCACCCACCGCAGCCAACCGTGCGTTCTAGTCGTTCGCCGCGTTTGAAGCTGTTGCATTCCTTCCGTAAACCTCAGTCCCGTTTGCCTAAGCCGAGCGTCAAGCATCGCGTCATTCTTCTCCCCGTGTGTCATCTGACGAAGCCCAGCCACTGCCACAGCAGTTCTTCAAGCCACTTCAGTTCTTTGTCTTCATTCCAATCACATCTCCGACCTCATCCATCTTCTCTGTTCTCTTCATTCATGCCACATCTTTGATCGACCCCATCTTCTTAGTAACCTTCACGATCGACATCGCCATTCAACTAACGACGACGACGTCTCTCTGCTGCTAACTCTATTGTCGTCACTTTTGGTATGTAACTTTCTCTTTTTCTTGGCTTTGTTTACATTTTTTTGGTTACTTATAGATGCTTGCAAGTATATCGATCCTTGTTCACTGGAAAATGATGGTGTTACGTTTCAAGTACATGAAATGCTTCATTGTAGTTTTTTGGCTCTATAGGAAAAGAATGCTGAGAAAAGTGTTATGATTTTGTTGTTGTCTTGACTTTGATCTAGTAACCATAGAGTGATTGTTTTCTGTTGGCTTTGCTTGTTGTTGGGATTGATTATTATGCATCTATATATTTGTTGTAGGGCAAGAAAGATCAATGAACAATTGTTCATTGATATTAGGTAAACTTTCAAGTAAAACTTTAGAGATACTCGTCGGGTGAGATGTTCTAAACTTTGGAGTTTGTTACTTAGAAGTTCCTTTCCTGGTGGAGGTTGTATTTGAGATTGTTTCTCCAAGATGATCTTTGGTTGATCTCTTTCATGATGCCTTTGAGATGGATTTACTTGTAAATTTGTATTTAATAGATCTTGATTTTTGCTTTGATTACCTTGTTTGTAGTGTGGGACTTTGTTTTCTTTCTATTTCTTGAGTAGTTGATACATCTTCTTAGTTAATGGGTGTTGGATCAAATTGGATGCCTTTAGGTTGAATTATATCTTCATTTCTCTCTTCCACAAGTGGTTGTTTGTTAAGATTATCCTTTGAGTGAGGCATTTTACATTCCATGTCATAGCAATTATTATTTTTCTTGTGAGTTGCAACACTTTCAGTTTCTTGTGGTTTTATCTCTAATCCATTTGTAGGATTATACCAATTTGCTACATATAAAAAACTTGTTATATCTAGAGATTCACAACTCAAGGGATGGTTAGTGGATTTGTTATCAAAAGTAAGGTAGTTTTCATCAAATATAACATAGATATGTAAACTTTATTTTTCTTTGGATTTAAACACCTAGCTATATCCCTTGTAAGACATCTTTATTAGCGAGTTATCGTAGACCTTTTTTCCTATGTAGTGTTGTTTAAGTTTGTGAATTTTAATGTGTAGGAGTTAGGTCCGAACAAAGCTTACCTCAGTTTAAATTTGACTCGTCTATTTTCTTTCTGTTTGTGGTTGTTTGATGTTTATAATGAACATATTAGTAGTTTATTTTGTCTTTGGTTGTTTGATGTTTGTGGAAATCCTTTCAGTCGATTTTGATTTTATCTTTGGTTGTTTGATGTTTGTGAAACCCAGAGTTTTCGAGGTAGTGAAAAGAGAATGGGAGAAGCATCTGTTGAGGTAGTGGCCTTTTGCTTTGGTGATTGGCTGTTCTATTATACAACTATTCATTTTGCAAGAAAAGATTAATAGTTTCATGGGTATCTGCAAGAGATTCTAGGCAACAATATTCTTCTCTTTTGTCGAGGTGATAGTTACAAGTTCCATGTTGCTGGTAGAGAGGATGTTGATGTAATATTCTTTCCTTATTACAATTAGGAAGCTCTTTACTTTTTGTAATATTAAATTTTCTTACCAGGTTCAAATGTTGGGTTCAGGTAGACTTTTCTTAGTTGAGATACAAAACGCATGTCTTCTCGCATTTGAGGTGATAATAAATGAATTACAGTCAAAGATAAATAGCTCGGAGAATAAATTGGTAAGTTGTTCATATTGTATTGCTTCTTCCATAGATTAAAATTACTGCAAACTTCATATGAATCACATTATTACTTCAGGTTGGCGTAAGAAATCTGAAAGTTGTAGGTAGCGAGGGTTGGGCCCTGGTTCAAGAAGGAGAAGCAGAGAAGCAGGTTTTCTCTATGAGCAATCTTTTTGTCAATTACAAATACAAGGTTCTATTTAATTCTGCATCTGTGACTCTTTAAATCATGCAAAAACAATATGCTTCACTTGTATGGACATCTCACCCACTTGAGGATGATGAATTTTTATCAATATCATCACTCCAAAACTTGGTGAGAAGTTCAACAAGCTTGATGCTTTGATTTCATAGCTTATTAGTTAGAGCCATTTTCCAATTTTACAGTGATGCTACAAAGTACAATCCACTCACGCTTCCACTTAGGGTCACTGACGATGTTCTCTTATTTCATTTTAGGATGAAGATTGAGAAGGTTGCTGAAAGTTCTCAGTATTATCTCTTACATTTGTGTACCTAGGTACAGTCTTTTAAAATTGAATTAAGGCCACGCTTTTTAGGAGAATTTTGGTAACAGAATCATATCATGAAAGTTTAGTTGTATTGTCTTTGAGTGGCTTTGTTTAAATCATTATTTTTTTGTCTAGGTTCCTTTTTAGGTTGCCTTCATATATTTATGTTGCTTGAGTATGGTCTTTGTGTTAGTTTTAGTCTGTATTTTCTCTTATTTTCTTTTACTCTTAGTATAATACTCTTGTATTTTCAGCTTTATATTGCATAAGCTTACTGGGTTTTGTTTTTCTGTTCTACTTCTCTGTTACTTACCACTTTCGTTACTTCATTTTACATTGCCGCTATATCCACTAAATCTAAGTATGTTTTTCTACAGGGATGGGTTTTGTTTCTTTTTCTAGTTTTTAAGTGATCGATCTGTTCTGCTAAGTGTAATTTTAATTCCAATTCCCAATTTTCTTGGATCTTTTATTTTGTTAACGACTGTTGCTTTGTTTATTTAGTGTTATTTTATAAACTTGGAGTTTCTAATGCGGATTAAATGGATATGTCTAATAGCATTTTAAGTGATTATACTACTTTAACTTCTAATATTCTTTTGCCTCTGTCATTGATTGTTAGTATATTTTGCTGTAATCTTTATTCTTTCCTAAGTTAAGCTTGGTGTAGGAGGGTTTAGTATGGGAGCGGCTACAACGCTTTACTTCTTTGTGCTTCTTTTCTGTTTACATGAAAATCTAAAGAAGCATTAATATATTCACTACCTATGCATTTCTTTTGCTTCTGGTTATGCGATTCTATTTTGGTATTCGATTGAGTTGAAGAATTGTGATTGATCTAGTTGATTTTATTCTTTAGATAGTTTAGTTTTGATCTAATATTGGTTGGTTGAATTCAAATAGAAAGTGTAATTAAAAAACACTATACGTGTTGCATAGAACAATATACATGTAATTCAAATAGAAAGTTATTGTGGTCTGCTAGTATGTTATTAGAAAGGTGTGCCACTTGTTTTTCTTTCTATTTCCTAGTGCAGCTAGCCAATCTTGTTATCAATATGTGATACCAATCCTTTAAAGTGTTTCCTCAGAGGGGGCTTGATTGTAAGTGTGTGGAGCAATATAGGTTGTTTTGAGATTCAATACTTCTCTTACGCACTTTTCATTCGTTTCACACTTTTTGAAAACTTTTGGTTGGTTGAGAATCAAAGTAAGTATAGGATCTTCTTGGGATTGTTACGAGACTCGAAGTGACATTTAAACTTTTTTTTTTTTTTTTGCTGTTTCAAGTGTTAAAGTGTTGCTTTGAAACTTTTTAGAAACTTTTTACGTTTGTTTTAAGAGCTTTATATTGATATTGTCATCACTGCTTTATATTCTAAGTGGTTTGATCATGCTGTGGTTGCTTAATGTGTTGATACTTTAAATAGCTAGGTTGTTGGATGGATTTGGGATAGGTCTTGTTGTCACTCTTGTTCATATTTATATTTCAGAAACTGCCACATCAGAAATAAGAGGCTTCAGGCCAAAAAGGTTTTCCAGAGACTCCGTGACATAAAGGATGTTTTAGGTTCATATTTTATTCTTTATTTAATTTCAGTTCTGATTTTCAATGGTCTTTTAGTTGTGCGCCTTCTAATAGTGACGATGAGATTGATGCAATCAATGATAGATTTTGCCATAATTATCTTAATCTTTAGCGTTTTAATTTGTCTTCGTTTTTACTCTGGTCATGTGATTTTAGTTTGGTATTCGATTGAGTTAAAGAATTGGGATTGATCTAGTTTATTTTGTTCTTTAGATAGTTTACTTTTGATCCAATATTGTGGGTATAATAATTTTCATAAATACTAATTCATTTATTTTGCATGTCTACAGATTGATACAAGAAAACCATACTCACAGGCCGAGTTAGATGAGGTGCGGGTTGAGTTGGTTGAGTTTTTGGGTTCGTACATATGATCTAGGATTTATTTGTCATCTCTGAAACATGAAACTTTATTTTTTATGGTTGATTTTTTGAAATGTTCATATGGAGGGGGACGGGGAGAGGTGGGGATTGATTGATATACTTTTGGGACTTTGTTGAGGTTTAGAGTTTAGGTGAATTGTTGGTAGGTGAACTGTTCATATGTATTGGTTTTGTAAATGATATATGAATATGATGCAAAGTTTTGGAAATGATATGAATGGATGATGTTTAGTTGCCATTTGATGTATATTTGTCGTTTATATGTAGTTGAATTCTTGGACCAATGAGAATATAATACAGGAACAATAATATAAATAAATTATAATTAAAAAAATGAAAAATTCTTGACGATTTTGAAACGTCATGAACAATAAATTTCTTGACGGTTCTAAAATGTCATTAAAAATCACTCTTGACAGTTCCTAAATGTCATGAAAAATGCACTCTTGACGGTTTTAAAATGTCATGAATATTCGTATTCTTGACGGTTTTTGCCATTCATAGTCACATTCTTAACGGTTCTAAACTGTCATTAAAACCTATATGCTCGACGGTTCTAAATTGTCATTAAAACCTATATGCTTGACGGTTCTAAACTGTCATGAAAAATGGAATACTTGACGGTTCTAAACTGTCAACGTTAACAATTCTTGACGTTTTTTTACAACTGTCAAGAAAAATACCTTTCTTGACACTGGATTCAATGACGGTTTTAAAACCATCAAGAATAATCACTCTTGACAGTTTAAAACCGTCAAGAAATCCTGTTTTTGTAGTAGCAGCAACAATTTCGACTTGAACTCATTTCTCAAATTGAGGAAGAGTTAAATAAGCTTCTTGAAGCTTGATTTATTTACAAAATCAAGTACACAACATGGATTGCTAATATCGTTCTCATAAGGAAGAAGAATGACCAACTACATGTTTGTATCAATCATCGCAACCTAAATACCGCATGTCACACAAGATGACTTTCTCTTTCCTATCATGGAAATCTTGGTAGATGCAACTGCGAGGCATGAAGCTTTATCTTTCATGGATGGGTTATCAAGATATAATCAAATTTGAATCGCTCTAGATGATGAAGAGAAAACAGTATTTCGAACTCCAAAAGGTATATATTGTTATAAGGTAATCCCTTTTGGATTAAAAAATGTAGGTGCCACATACCAGCGTATTATGCAAAGGATCTTTGATGATATACTACATAAACATGTTGAATGTTATGTTGATGATCTTGTAGTGAAATCCAAGAAGAAATGTGACCACCTGAAAGACCTGAAGCTTGTCCTTAATCGCCTATGGAAATATCAACTTAGAATGAACCCCCTTAAGCATTTATCTGGCTTGACCTCAGGAAAGTTTCTGGTATTTATTGTGAGGCATCGTGGAATTGAAGTTGATCGATCACTCTAAAATTGATGTCATCCAAAAGATGCAAGTTTGAAAAACATGCACAAGTTGAGACGATTGCAAGGTCGTTTGGCTTGATGAAAAATGAACTAGGATTAGATGCAATAGAATTAATGTAAGCCATCGTTCCGTTCTCTTTTATTTTATCTATTTATTTAATATTTCCTAAATGGTGAAAAAAAAGTTAGAATATTTTCTTTTATACTCTTTAAGGTTGATTTTCCTTTTAAGGAAAATTTAGAAACATGTTAGTTGGGTTTAAGACTTAAATTTTGTTAGTATTTGAAAAGATTATCTAAGGGGAAAAAGCGAAAATTAAATTTGAAATGTGGGGCATCATGGTAATTTCTTCCATGTTTTAATAAAAAAAAAAGTGAGTAAACAAAAAAGAATATCCTAATTTTTTTTCTTCTTCTTCTTCCCTTTGGTTGAACGCACGCCCGCCCCCTATTGATATTTTTTTTCTTCTCCCCGAGATCCGACCAACGTTGCGCCCCTCTCGTTCCTGACCTTCTCTTTCCAAAGTCGTTGTCGTCAGGGCTTCGCTCGACTGTTTCCACCCAAACCCCGCGATAGACACCGACGTACCCTCGCAGTTCAGTTGCTCGTCGTCGTTCCTTTGTTCGCACCATCGCCTCTCCTTCCTCGTGTACCGTCCAACGAAACCAGCTGCTACACCGCGTTTCTCCTTCAGCCACTGTGCGTGTTAACCCATCGGAGATCGGTTTAGCCGTTGGCGTCCATTCTTCTTTCAGATCTACCTTTTAGAATTTAAATGTTGGAAGAGTTTAAACTACAGTCGACTGTTCAGAAGCTCAAAATCGGACGTTTTGGCACATTTTGAATAAGATTCTAAGCTTTATTGAAGGGGTCTTTAGAACCCATTGATTTTTTGTGCCAATATTAAGCAAACCATGGTTTATGGATGCTAGAATTCGATAGTTGAATGCCATTAGAGCATTTTTCATTGAAGTTAAGGTTACTTTGCTAAGTGCTTGGTAAGGGTTGGAGTAACTTAAGTGAATTTTCTACGAGTTCTTACATGCTCAATAAGTCTAAGCATTGAGATTAAATTATTTATATTACTCGGGTCCTAAGTTGAATGTTAGAGGTTAAGAAGGGACATTCTTCTAGCTTAGAGGTCGTTGGATCCTGTTTTTACATTTGGAATGTAAATGGGCTAGGGAATCTTATGAAGTATTTAAAGTTAACTAACTCGCGTTGATATATAACGAATCTAACTCTCAAATATCATCAATAGTAGAAATTAAAGTGTATGGGATTAAAAGATTTGCTAAGATTGACTTGAGAGTATGCTTAAGGTGCTAAGAGTTAAGTTTGAACTTAAGGGTCCAAAAGTAGATTTTTAGCCTAAACTAAAGCATGTGGTGAATGATACAATTTAATAAGAAAAATATAGTTTTCGACACATCGAATCATAAATAGTTTGAGTGGTCACAATGAAATATTTTAGAGATAATTGTAGTATCTTGATATGCAAAGATAACTAAGGGTCATTAATCGTTGTTTCAGGCCAAATTGAAGTGGGGAAAGCGTATAACCCCGAGAGATAGAGTTACTGATTATGAGTGGCTTATTTTCGAGCATTATTTATAATTGTACATGTTATCTCATGATACTGCTTGGAAAACCACTACGACCTAAGCTTTCATGACATGTTCTCGTTTATGTTTAAATAGACATATGCATCACATTTTTTTAAAAAAGTTTATGACTTGGATTTGATAAAGAAAGGTTTCAGGTTCTTGTTTCCATTGATACTTAAACGATATGTTTACTCATCATGATTTTGAGAATACGTATGGCTTGATTCTTATAAAATTGTATTTTAAGTTTTTGATTATACTTGGTTTAAAATACGATTAACTGATGCTTATGATGAACAAGAAGGTGATTTCTCTAAGGCTACGTGAACGTGTTTCTGTAGCACCACCATTGGTTGTCGGGAGATTTTAGGGCTGAAAGAGGCCGTGATCAGAGATCCGAGAACTTGAACCTAGGTGAGGATGTGGATGGAGAATTGTGATATGACTTTGGGCCTAGCTAAACCTACGGTAGGTGGCTCTATGTGCACATAGGAGTGGTATGTGGTTACTATGGTAGGTGCTAAGTATGTGTGAGCTCCGTTTGGCTGTGTGTTTCTTTGTAGATATGAAGCACATGTGAGCTATTCCCGGGCCGTATACTTAGTATGCTATCGTGATTGGATTGGATTGGATGGATGTTGTTACTGTGGTAGGTATTAAGTATGCGCGAGTTCCGTTTGGCCGTGTGTTTCCTTGTGGATATGAAGCACGTGTGAGCTATTCTCAGGTCGTATACTTAGTATGCTATCATGGTTGGTTTGGATTAATTGGAGGTTGCTTTCGTGGTGGGTACTAAAGATGTGCGAGCTAGGTTTGGGGGTGCATGATTCTTTGTCATGTATGAGCTATCTTTGGCCGTATTTTTAGATGCCTCGCCATGGTTGGATTGGCTACAGGTTATTGGTGGACTAATGGCCATGAGTAA

mRNA sequence

ATGTTGTCGTCAGCCCCTTTTCTTCGACGACCACCCACCGCAGCCAACCATGCTTGCAAGTATATCGATCCTTGTTCACTGGAAAATGATGGTGTTACGTTTCAAGTTCAAATGTTGGGTTCAGGTAGACTTTTCTTAGTTGAGATACAAAACGCATGTCTTCTCGCATTTGAGGTGATAATAAATGAATTACAGTCAAAGATAAATAGCTCGGAGAATAAATTGGTTGGCGTAAGAAATCTGAAAGTTGTAGGTAGCGAGGGTTGGGCCCTGGTTCAAGAAGGAGAAGCAGAGAAGCAGATTGATACAAGAAAACCATACTCACAGGCCGAGTTAGATGAGGTGCGGGTTGAGTTGGTTGAGTTTTTGGGTGCCACATACCAGCGTATTATGCAAAGGATCTTTGATGATATACTACATAAACATGTTGAATGTTATGTTGATGATCTTGTAGTGAAATCCAAGAAGAAATGTGACCACCTGAAAGACCTGAAGCTTGTCCTTAATCGCCTATGGAAATATCAACTTAGAATGAACCCCCTTAAGCATTTATCTGGCTTGACCTCAGGAAAGTTTCTGGGCTTCGCTCGACTGTTTCCACCCAAACCCCGCGATAGACACCGACGTACCCTCGCAGTTCAGTTGCTCGTCGTCGTTCCTTTGTTCGCACCATCGCCTCTCCTTCCTCGTGTACCGTCCAACGAAACCAGCTGCTACACCGCGTTTCTCCTTCAGCCACTGTGCGTGTTAACCCATCGGAGATCGCACCACCATTGGTTGTCGGGAGATTTTAGGGCTGAAAGAGGCCGTGATCAGAGATCCGAGAACTTGAACCTAGGTGAGGATGTGGATGGAGAATTATATGAAGCACATGTGAGCTATTCCCGGGCCGTATACTTAGTATGCTATCGTGATTGGATTGGATTGGATGGATGTTGTTACTGTGGTAGATGCCTCGCCATGGTTGGATTGGCTACAGGTTATTGGTGGACTAATGGCCATGAGTAA

Coding sequence (CDS)

ATGTTGTCGTCAGCCCCTTTTCTTCGACGACCACCCACCGCAGCCAACCATGCTTGCAAGTATATCGATCCTTGTTCACTGGAAAATGATGGTGTTACGTTTCAAGTTCAAATGTTGGGTTCAGGTAGACTTTTCTTAGTTGAGATACAAAACGCATGTCTTCTCGCATTTGAGGTGATAATAAATGAATTACAGTCAAAGATAAATAGCTCGGAGAATAAATTGGTTGGCGTAAGAAATCTGAAAGTTGTAGGTAGCGAGGGTTGGGCCCTGGTTCAAGAAGGAGAAGCAGAGAAGCAGATTGATACAAGAAAACCATACTCACAGGCCGAGTTAGATGAGGTGCGGGTTGAGTTGGTTGAGTTTTTGGGTGCCACATACCAGCGTATTATGCAAAGGATCTTTGATGATATACTACATAAACATGTTGAATGTTATGTTGATGATCTTGTAGTGAAATCCAAGAAGAAATGTGACCACCTGAAAGACCTGAAGCTTGTCCTTAATCGCCTATGGAAATATCAACTTAGAATGAACCCCCTTAAGCATTTATCTGGCTTGACCTCAGGAAAGTTTCTGGGCTTCGCTCGACTGTTTCCACCCAAACCCCGCGATAGACACCGACGTACCCTCGCAGTTCAGTTGCTCGTCGTCGTTCCTTTGTTCGCACCATCGCCTCTCCTTCCTCGTGTACCGTCCAACGAAACCAGCTGCTACACCGCGTTTCTCCTTCAGCCACTGTGCGTGTTAACCCATCGGAGATCGCACCACCATTGGTTGTCGGGAGATTTTAGGGCTGAAAGAGGCCGTGATCAGAGATCCGAGAACTTGAACCTAGGTGAGGATGTGGATGGAGAATTATATGAAGCACATGTGAGCTATTCCCGGGCCGTATACTTAGTATGCTATCGTGATTGGATTGGATTGGATGGATGTTGTTACTGTGGTAGATGCCTCGCCATGGTTGGATTGGCTACAGGTTATTGGTGGACTAATGGCCATGAGTAA

Protein sequence

MLSSAPFLRRPPTAANHACKYIDPCSLENDGVTFQVQMLGSGRLFLVEIQNACLLAFEVIINELQSKINSSENKLVGVRNLKVVGSEGWALVQEGEAEKQIDTRKPYSQAELDEVRVELVEFLGATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKHLSGLTSGKFLGFARLFPPKPRDRHRRTLAVQLLVVVPLFAPSPLLPRVPSNETSCYTAFLLQPLCVLTHRRSHHHWLSGDFRAERGRDQRSENLNLGEDVDGELYEAHVSYSRAVYLVCYRDWIGLDGCCYCGRCLAMVGLATGYWWTNGHE
Homology
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BLAST of MELO3C035121 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 8.9e-27
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124  GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
            GATYQR MQRIFDD+LHKHVECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 1494 GATYQRAMQRIFDDMLHKHVECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 1553

Query: 184  LSGLTSGKFLGF 196
              G+TSGKFLGF
Sbjct: 1554 AFGVTSGKFLGF 1565

[Close]
BLAST of MELO3C035121 vs. NCBI nr
Match: TYK16275.1 (uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 8.9e-27
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124 GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
           GATYQR MQRIFDD+LHKHVECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 677 GATYQRAMQRIFDDMLHKHVECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 736

Query: 184 LSGLTSGKFLGF 196
             G+TSGKFLGF
Sbjct: 737 AFGVTSGKFLGF 748

[Close]
BLAST of MELO3C035121 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 8.9e-27
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124  GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
            GATYQR MQRIFDD+LHKHVECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 1424 GATYQRAMQRIFDDMLHKHVECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 1483

Query: 184  LSGLTSGKFLGF 196
              G+TSGKFLGF
Sbjct: 1484 AFGVTSGKFLGF 1495

[Close]
BLAST of MELO3C035121 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-26
Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124  GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
            GATYQR MQRIFDD+LHKH+ECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 1472 GATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 1531

Query: 184  LSGLTSGKFLGF 196
              G+TSGKFLGF
Sbjct: 1532 AFGVTSGKFLGF 1543

[Close]
BLAST of MELO3C035121 vs. NCBI nr
Match: KAA0057578.1 (uncharacterized protein E6C27_scaffold497G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-26
Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124 GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
           GATYQR MQRIFDD+LHKH+ECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 269 GATYQRTMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 328

Query: 184 LSGLTSGKFLGF 196
             G+TSGKFLGF
Sbjct: 329 AFGVTSGKFLGF 340

[Close]
BLAST of MELO3C035121 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.3e-27
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124  GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
            GATYQR MQRIFDD+LHKHVECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 1494 GATYQRAMQRIFDDMLHKHVECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 1553

Query: 184  LSGLTSGKFLGF 196
              G+TSGKFLGF
Sbjct: 1554 AFGVTSGKFLGF 1565

[Close]
BLAST of MELO3C035121 vs. ExPASy TrEMBL
Match: A0A5D3CXS1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00440 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.3e-27
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124 GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
           GATYQR MQRIFDD+LHKHVECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 677 GATYQRAMQRIFDDMLHKHVECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 736

Query: 184 LSGLTSGKFLGF 196
             G+TSGKFLGF
Sbjct: 737 AFGVTSGKFLGF 748

[Close]
BLAST of MELO3C035121 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.3e-27
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124  GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
            GATYQR MQRIFDD+LHKHVECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 1424 GATYQRAMQRIFDDMLHKHVECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 1483

Query: 184  LSGLTSGKFLGF 196
              G+TSGKFLGF
Sbjct: 1484 AFGVTSGKFLGF 1495

[Close]
BLAST of MELO3C035121 vs. ExPASy TrEMBL
Match: A0A5A7VKJ9 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00600 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.6e-27
Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 0 

Query: 123 LGATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLK 182
           +GATYQR MQRIFDD+LHKH+ECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK
Sbjct: 346 VGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLK 405

Query: 183 HLSGLTSGKFLGF 196
              G+TSGKFLGF
Sbjct: 406 CAFGVTSGKFLGF 418

[Close]
BLAST of MELO3C035121 vs. ExPASy TrEMBL
Match: A0A5D3CUG5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001100 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.6e-27
Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 124  GATYQRIMQRIFDDILHKHVECYVDDLVVKSKKKCDHLKDLKLVLNRLWKYQLRMNPLKH 183
            GATYQR MQRIFDD+LHKH+ECYVDDLVVKSKKKCDHLKDLKLVL+RL KYQLRMNPLK 
Sbjct: 1188 GATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKC 1247

Query: 184  LSGLTSGKFLGF 196
              G+TSGKFLGF
Sbjct: 1248 AFGVTSGKFLGF 1259

[Close]
BLAST of MELO3C035121 vs. TAIR 10
Match: AT1G20410.1 (Pseudouridine synthase family protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 38/65 (58.46%), Postives = 52/65 (80.00%), Query Frame = 0 

Query: 36  VQMLGSGRLFLVEIQNACLLAFEVIINELQSKINSSENKLVGVRNLKVVGSEGWALVQEG 95
           V+MLGSGR FL+E+QN+  L  E  + E++ KIN SE KLVGV++LK +GS+ WA+++EG
Sbjct: 325 VRMLGSGRPFLIEVQNSRQLPSEQSLKEVEEKINKSEKKLVGVKDLKCIGSQCWAMMREG 384

Query: 96  EAEKQ 101
           EAEKQ
Sbjct: 385 EAEKQ 389

The following BLAST results are available for this feature:
BLAST of MELO3C035121 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035121 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047477.18.9e-2788.89uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa][more]
TYK16275.18.9e-2788.89uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa][more]
TYK18071.18.9e-2788.89uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa][more]
TYJ98225.11.2e-2687.50uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa][more]
KAA0057578.11.2e-2687.50uncharacterized protein E6C27_scaffold497G00500 [Cucumis melo var. makuwa][more]
BLAST of MELO3C035121 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TZU94.3e-2788.89Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]
A0A5D3CXS14.3e-2788.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D1E54.3e-2788.89Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402... [more]
A0A5A7VKJ95.6e-2786.30RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3CUG55.6e-2787.50Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of MELO3C035121 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G20410.11.1e-1458.46Pseudouridine synthase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableGENE3D3.30.70.2510coord: 33..95
e-value: 1.2E-7
score: 33.9
NoneNo IPR availablePANTHERPTHR21568:SF1BNAC07G15400D PROTEINcoord: 34..101
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 96..196
e-value: 1.1E-18
score: 69.3
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 125..195
e-value: 6.1E-8
score: 32.5
IPR039894tRNA pseudouridine synthase Pus10-likePANTHERPTHR21568UNCHARACTERIZEDcoord: 34..101
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 102..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035121.1MELO3C035121.1mRNA