MELO3C035103 (gene) Melon (DHL92) v4

Overview
NameMELO3C035103
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 20464213 .. 20464596 (-)
RNA-Seq ExpressionMELO3C035103
SyntenyMELO3C035103
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGCAGGGGAGCACAGCCCTGGGATTAAAAACCAAAAGCTCTTCTTCATCCAACGTGGACTGGGCCCCACTCCCACTCCTTCCGACCACGGAATCAAACCCTCCGCCGTCTTTTTCCGGCTCATCGGCATCGCACCCAACCCGACCCGCCACAACCCGACAGACCAAAATCGCCCGTTTCACGTTGAGAAACTTGAATTCCTCCTCGATGTCCTCTGGGATCGCCACGTGTGCCCTCCAGCTACTCGCCACCGTCGAAATTCCGTCCAACTTGTGTGAAAATCCCGATTTAATTATCCCACAAATACTACAAAATTGCTGCCCGCAAATACTTGAGTTTCCATTTTGTCCCAAATCGCATAAAAACGTCGAACAGTGA

mRNA sequence

ATGGCGAAGCAGGGGAGCACAGCCCTGGGATTAAAAACCAAAAGCTCTTCTTCATCCAACGTGGACTGGGCCCCACTCCCACTCCTTCCGACCACGGAATCAAACCCTCCGCCGTCTTTTTCCGGCTCATCGGCATCGCACCCAACCCGACCCGCCACAACCCGACAGACCAAAATCGCCCGTTTCACGTTGAGAAACTTGAATTCCTCCTCGATGTCCTCTGGGATCGCCACGTGTGCCCTCCAGCTACTCGCCACCGTCGAAATTCCGTCCAACTTGTGTGAAAATCCCGATTTAATTATCCCACAAATACTACAAAATTGCTGCCCGCAAATACTTGAGTTTCCATTTTGTCCCAAATCGCATAAAAACGTCGAACAGTGA

Coding sequence (CDS)

ATGGCGAAGCAGGGGAGCACAGCCCTGGGATTAAAAACCAAAAGCTCTTCTTCATCCAACGTGGACTGGGCCCCACTCCCACTCCTTCCGACCACGGAATCAAACCCTCCGCCGTCTTTTTCCGGCTCATCGGCATCGCACCCAACCCGACCCGCCACAACCCGACAGACCAAAATCGCCCGTTTCACGTTGAGAAACTTGAATTCCTCCTCGATGTCCTCTGGGATCGCCACGTGTGCCCTCCAGCTACTCGCCACCGTCGAAATTCCGTCCAACTTGTGTGAAAATCCCGATTTAATTATCCCACAAATACTACAAAATTGCTGCCCGCAAATACTTGAGTTTCCATTTTGTCCCAAATCGCATAAAAACGTCGAACAGTGA

Protein sequence

MAKQGSTALGLKTKSSSSSNVDWAPLPLLPTTESNPPPSFSGSSASHPTRPATTRQTKIARFTLRNLNSSSMSSGIATCALQLLATVEIPSNLCENPDLIIPQILQNCCPQILEFPFCPKSHKNVEQ
Homology
BLAST of MELO3C035103 vs. NCBI nr
Match: XP_019054995.1 (PREDICTED: uncharacterized protein LOC109115428 [Nelumbo nucifera])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0

Query: 39  SFSGSSASHPTRPATTRQTKIARFTLRNLNSSSMSSGIATCALQLLATVEIPSNLCENPD 98
           S S S    P RPATTR T +ARFT   +NSSS+SSG A CALQLL +V +PS L ENPD
Sbjct: 48  STSSSHPMIPMRPATTRHTSMARFTFVKVNSSSISSGSAMCALQLLDSVNMPSILAENPD 107

Query: 99  LIIPQIL 106
           L+IPQIL
Sbjct: 108 LMIPQIL 114

BLAST of MELO3C035103 vs. ExPASy TrEMBL
Match: A0A0A0KH58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G187400 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0

Query: 1   MAKQGSTALGLKTKSSSSSNVDWAPLPLLPTTESNPPPSFSGSSASHPTRPATTRQTKIA 60
           MAKQGSTALGLKTKSSSSSNV WAPLP+LPTTESNPPPSFSGSSAS PTRPATTRQTKIA
Sbjct: 1   MAKQGSTALGLKTKSSSSSNVVWAPLPVLPTTESNPPPSFSGSSASDPTRPATTRQTKIA 60

Query: 61  RFTLRNLNSSSMSSGIATCALQLLATVEIPSNLCENPDLIIPQILQNCCPQILEFPFCPK 120
           RFTLRNLNSSSMSSGIATCALQL ATVEIPSNLCENPDLIIPQILQNCCPQILE PFCPK
Sbjct: 61  RFTLRNLNSSSMSSGIATCALQLFATVEIPSNLCENPDLIIPQILQNCCPQILELPFCPK 120

Query: 121 SHKNVEQ 128
           SHKNVEQ
Sbjct: 121 SHKNVEQ 127

BLAST of MELO3C035103 vs. ExPASy TrEMBL
Match: A0A1U8QA87 (uncharacterized protein LOC109115428 OS=Nelumbo nucifera OX=4432 GN=LOC109115428 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0

Query: 39  SFSGSSASHPTRPATTRQTKIARFTLRNLNSSSMSSGIATCALQLLATVEIPSNLCENPD 98
           S S S    P RPATTR T +ARFT   +NSSS+SSG A CALQLL +V +PS L ENPD
Sbjct: 48  STSSSHPMIPMRPATTRHTSMARFTFVKVNSSSISSGSAMCALQLLDSVNMPSILAENPD 107

Query: 99  LIIPQIL 106
           L+IPQIL
Sbjct: 108 LMIPQIL 114

BLAST of MELO3C035103 vs. ExPASy TrEMBL
Match: A0A2P2J653 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08
Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query: 59  IARFTLRNLNSSSMSSGIATCALQLLATVEIPSNLCENPDLIIPQILQNC 109
           +ARFT  NLNSSS+SSGIA CALQL   VEIPS+  E PDLIIPQ LQ C
Sbjct: 1   MARFTFMNLNSSSISSGIAACALQLADRVEIPSSFGEKPDLIIPQTLQYC 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_019054995.12.2e-1064.18PREDICTED: uncharacterized protein LOC109115428 [Nelumbo nucifera][more]
Match NameE-valueIdentityDescription
A0A0A0KH581.6e-5996.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G187400 PE=4 SV=1[more]
A0A1U8QA871.1e-1064.18uncharacterized protein LOC109115428 OS=Nelumbo nucifera OX=4432 GN=LOC109115428... [more]
A0A2P2J6532.2e-0872.00Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035103.1MELO3C035103.1mRNA