MELO3C035091 (gene) Melon (DHL92) v4

Overview
NameMELO3C035091
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionVacuolar protein sorting-associated protein 32-like protein 2
Locationchr11: 19975416 .. 19977539 (-)
RNA-Seq ExpressionMELO3C035091
SyntenyMELO3C035091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCCAAGGCCACCCAAACGCACAACCATTCCTGATGCTGGCCACACAGATGCACGGCGACGCAAGGTACTCCGAAATTCCTATGAACACCGTTCTCTCCCCAAATCTTGTCTTCAACCTAAGCTCGAATCTTTACCTTCGCTGTAGTTTGTTTTATTCTCTGGGATTTCTCTTTTTTTTTTTTATGAATTTCGAGTTTCTTACATCAATGGACTATTTTAGTTTTTGTATTAAATACCTATCCCTTGATGCTTATCGTTCTATACAATCGTTGACCGCCGTCCTCCGCCTGCCTCGTCTCTTTCATTGATGTTGAATCAGCAAGTTGAAGCCAAGCGTTTAAATCCGATTTTGTTCGTTGTTGTAGAAGATCGAGAGAGGATTCTTGTTGCTCTGCATCAACAATGTTTAACAGGCTTTTTGGTAAACTTGAACAAGAAGCCAATGCTTTGGCTACGTTAGAGAAGCTAAGCGAGGTGCCATTTTGTGATTTTATTTTTTAGATTGATATTCTTTTTATAGAAACAATATTTTCTTGTGTGTGTCATTTGTTTTGAGCTTTAGCTCTATTTCAACAATTTTTTTTTTGTTCTACAAATGGCAATTGATGTGTTTTAGGTGAAATTACACTTATGTAAATTAATTGGTTGTTATTCTTCTAGCTACCATATTGAAAGAGTAGATAATTGAAATCATGTCCGGAACGATTGTAATTGTGATTGCATAGGCTTTTGTAGTCTGGCAAAGTTTTTTCGTAATTGATAATAATGTTTCTAGGTACTATTTTTATTGTTTGTAATTCTCTATTTAGACACTTGAAATGGTGGAGAAGAAAGAGAATGATCTTGTGAAGAAGGCCGTAGCTGCAGAGGTCGAAGAAGGCAGATCTTGTGAGTGTAGTAGCGGTATGAATTTTTGTTTCCTTTGTTAGCATTTCTTATATGTGTGACGTGTGAATAAGATTTCATTAATACCTATATTGTCCGCTCTTAGTTGTAAACTTGTTGGTAGCACCATACCTATTTTACACGGTTGGTCATTCTGCCTTATGCTCTTTTGGCTTTTGCTATTATCTTTATGGCTTCTAGTTGAAATGTAGCTTTCTATTTCTTTTATAGTAGGGTTGTGTATGGCAAGATTTTTAGCTACAACGAAGACGGTAGATTCTTTAAGAACAAAAGTATCCACAATGAAGGCAATGCAGAAAGCAACTTATCCCTGTTTTACTTGCTCTCATTTTGCCTTTGTGGTTTATAACCTTTCAGAATTTTGGTCATTGAATATTCCTAGTTTTATTGTTGTTTTATTACTTTGTCAGATTATAAAAAAAAAAAAAGAAGCTTTACAACATATCTAAACTTATTTAGTAACCTTATTCATCTAGTTATTGGGGAGGGATATGCAAGTCTGTTGTTGTAACATTGTAACTAAGTTTTGATTGGAAATTGCAGGTAAATGGGATCATACATACATTCATATGTCATGGCTGATTGTGTGCATCATCCAAAGAAATCTTCCTCTTAAGTGTTAAAAATTTTATACTGATGTGATACAGTGTATATAAAGTTGGCTGAATGATTGGAATTGTGATTTAAATCAATCTTTTTATTTATTTATTTTCTATTTTGCAGAGATTGGGAACAACCTGTCATCTTTTTTAAATTTTCATTCACGTTCACCCCTCGGCAAGTGTAGGTAAGGTAGGTATACTTTAACTCTCCCACAAGTATTTTTAATCAAGTTTCTCTAAATCTTCCTCATTTACATAATATTAGGCTTCTCTAGTATGTCTTGATTTTTCTCCTTAAATAATTGATGATCAATTTTTTTTCCTTTTATACTAAAACTTGACAAATTCTATTGTAGATTGTGGCTTCAAGAATTATTTCGTGAAACTTACTATGAAGCTTCATGAAGTATTTAACACTCAGAAAGATGTAATTATTAAGAGTCATAAGATAATTTAATGTTTTAGAGTCCTATAGGTAGTGATTTTATTTATCTTTGTAAATTGAGAGTAGTTTGTGGAGAGACATGAATAGTCATACTACTTTATAATATTGTTGTAAATTATGTACACATGACTTACCATTGAAGAATGAAATTATTGTTGCTTGACGA

mRNA sequence

ATGGACCCAAGGCCACCCAAACGCACAACCATTCCTGATGCTGGCCACACAGATGCACGGCGACGCAAGGTACTCCGAAATTCCTATGAACACCGTTCTCTCCCCAAATCTTGTCTTCAACCTAAGCTCGAATCTTTACCTTCGCTAAGATCGAGAGAGGATTCTTGTTGCTCTGCATCAACAATGTTTAACAGGCTTTTTGGTAAACTTGAACAAGAAGCCAATGCTTTGGCTACGTTAGAGAAGCTAAGCGAGACACTTGAAATGGTGGAGAAGAAAGAGAATGATCTTGTGAAGAAGGCCGTAGCTGCAGAGGTCGAAGAAGGCAGATCTTGTGAGTGTAGTAGCGGGTTGTGTATGGCAAGATTTTTAGCTACAACGAAGACGAGATTGGGAACAACCTGTCATCTTTTTTAAATTTTCATTCACGTTCACCCCTCGGCAAGTGTAGGTAAGATTGTGGCTTCAAGAATTATTTCGTGAAACTTACTATGAAGCTTCATGAAGTATTTAACACTCAGAAAGATGTAATTATTAAGAGTCATAAGATAATTTAATGTTTTAGAGTCCTATAGGTAGTGATTTTATTTATCTTTGTAAATTGAGAGTAGTTTGTGGAGAGACATGAATAGTCATACTACTTTATAATATTGTTGTAAATTATGTACACATGACTTACCATTGAAGAATGAAATTATTGTTGCTTGACGA

Coding sequence (CDS)

ATGGACCCAAGGCCACCCAAACGCACAACCATTCCTGATGCTGGCCACACAGATGCACGGCGACGCAAGGTACTCCGAAATTCCTATGAACACCGTTCTCTCCCCAAATCTTGTCTTCAACCTAAGCTCGAATCTTTACCTTCGCTAAGATCGAGAGAGGATTCTTGTTGCTCTGCATCAACAATGTTTAACAGGCTTTTTGGTAAACTTGAACAAGAAGCCAATGCTTTGGCTACGTTAGAGAAGCTAAGCGAGACACTTGAAATGGTGGAGAAGAAAGAGAATGATCTTGTGAAGAAGGCCGTAGCTGCAGAGGTCGAAGAAGGCAGATCTTGTGAGTGTAGTAGCGGGTTGTGTATGGCAAGATTTTTAGCTACAACGAAGACGAGATTGGGAACAACCTGTCATCTTTTTTAA

Protein sequence

MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSGLCMARFLATTKTRLGTTCHLF
Homology
BLAST of MELO3C035091 vs. ExPASy Swiss-Prot
Match: Q9SZE4 (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS32.2 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 62  MFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGR 111
           M NRLFGK +QEANAL TL+KL+ETLEM+EKKE  L+KKA  AEVE+ +
Sbjct: 1   MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKA-GAEVEKAK 48

BLAST of MELO3C035091 vs. ExPASy Swiss-Prot
Match: O82197 (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS32.1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.8e-06
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0

Query: 64  NRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGR 111
           NRLFGK +QE + L TL+KL+ETLEM+EKKEN L+KKA   EVE+ +
Sbjct: 4   NRLFGKPKQETSTLQTLDKLNETLEMLEKKENVLLKKA-TGEVEKAK 49

BLAST of MELO3C035091 vs. NCBI nr
Match: TYK24029.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS 60
           MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS
Sbjct: 1   MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS 60

Query: 61  TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG 118
           TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG
Sbjct: 61  TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG 117

BLAST of MELO3C035091 vs. NCBI nr
Match: KAA0061901.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS 60
           MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS
Sbjct: 1   MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS 60

Query: 61  TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG 118
           TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG
Sbjct: 61  TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG 117

BLAST of MELO3C035091 vs. NCBI nr
Match: XP_008464115.1 (PREDICTED: uncharacterized protein LOC103502077 isoform X1 [Cucumis melo] >XP_008464116.1 PREDICTED: uncharacterized protein LOC103502077 isoform X1 [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-26
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 50  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 109
           RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG
Sbjct: 33  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 92

Query: 110 RSCECSSG 118
           RSCECSSG
Sbjct: 93  RSCECSSG 100

BLAST of MELO3C035091 vs. NCBI nr
Match: XP_016903139.1 (PREDICTED: uncharacterized protein LOC103502077 isoform X5 [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-26
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 50  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 109
           RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG
Sbjct: 33  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 92

Query: 110 RSCECSSG 118
           RSCECSSG
Sbjct: 93  RSCECSSG 100

BLAST of MELO3C035091 vs. NCBI nr
Match: XP_016903138.1 (PREDICTED: uncharacterized protein LOC103502077 isoform X2 [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-26
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 50  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 109
           RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG
Sbjct: 32  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 91

Query: 110 RSCECSSG 118
           RSCECSSG
Sbjct: 92  RSCECSSG 99

BLAST of MELO3C035091 vs. ExPASy TrEMBL
Match: A0A5A7V832 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001530 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.1e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS 60
           MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS
Sbjct: 1   MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS 60

Query: 61  TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG 118
           TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG
Sbjct: 61  TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG 117

BLAST of MELO3C035091 vs. ExPASy TrEMBL
Match: A0A5D3DL74 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001290 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.1e-56
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS 60
           MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS
Sbjct: 1   MDPRPPKRTTIPDAGHTDARRRKVLRNSYEHRSLPKSCLQPKLESLPSLRSREDSCCSAS 60

Query: 61  TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG 118
           TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG
Sbjct: 61  TMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGRSCECSSG 117

BLAST of MELO3C035091 vs. ExPASy TrEMBL
Match: A0A1S3CL70 (uncharacterized protein LOC103502077 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502077 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.7e-27
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 50  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 109
           RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG
Sbjct: 33  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 92

Query: 110 RSCECSSG 118
           RSCECSSG
Sbjct: 93  RSCECSSG 100

BLAST of MELO3C035091 vs. ExPASy TrEMBL
Match: A0A1S4E4H8 (uncharacterized protein LOC103502077 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502077 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.7e-27
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 50  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 109
           RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG
Sbjct: 32  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 91

Query: 110 RSCECSSG 118
           RSCECSSG
Sbjct: 92  RSCECSSG 99

BLAST of MELO3C035091 vs. ExPASy TrEMBL
Match: A0A1S4E4I8 (uncharacterized protein LOC103502077 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103502077 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.7e-27
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 50  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 109
           RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG
Sbjct: 33  RSREDSCCSASTMFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEG 92

Query: 110 RSCECSSG 118
           RSCECSSG
Sbjct: 93  RSCECSSG 100

BLAST of MELO3C035091 vs. TAIR 10
Match: AT4G29160.1 (SNF7 family protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 62  MFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGR 111
           M NRLFGK +QEANAL TL+KL+ETLEM+EKKE  L+KKA  AEVE+ +
Sbjct: 1   MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKA-GAEVEKAK 48

BLAST of MELO3C035091 vs. TAIR 10
Match: AT4G29160.3 (SNF7 family protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 62  MFNRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGR 111
           M NRLFGK +QEANAL TL+KL+ETLEM+EKKE  L+KKA  AEVE+ +
Sbjct: 1   MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKA-GAEVEKAK 48

BLAST of MELO3C035091 vs. TAIR 10
Match: AT2G19830.1 (SNF7 family protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0

Query: 64  NRLFGKLEQEANALATLEKLSETLEMVEKKENDLVKKAVAAEVEEGR 111
           NRLFGK +QE + L TL+KL+ETLEM+EKKEN L+KKA   EVE+ +
Sbjct: 4   NRLFGKPKQETSTLQTLDKLNETLEMLEKKENVLLKKA-TGEVEKAK 49

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SZE43.0e-0869.39Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana... [more]
O821972.8e-0663.83Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana... [more]
Match NameE-valueIdentityDescription
TYK24029.16.4e-56100.00Ulp1-like peptidase [Cucumis melo var. makuwa][more]
KAA0061901.16.4e-56100.00Ulp1-like peptidase [Cucumis melo var. makuwa][more]
XP_008464115.11.4e-26100.00PREDICTED: uncharacterized protein LOC103502077 isoform X1 [Cucumis melo] >XP_00... [more]
XP_016903139.11.4e-26100.00PREDICTED: uncharacterized protein LOC103502077 isoform X5 [Cucumis melo][more]
XP_016903138.11.4e-26100.00PREDICTED: uncharacterized protein LOC103502077 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A5A7V8323.1e-56100.00Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G0... [more]
A0A5D3DL743.1e-56100.00Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G... [more]
A0A1S3CL706.7e-27100.00uncharacterized protein LOC103502077 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4E4H86.7e-27100.00uncharacterized protein LOC103502077 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4E4I86.7e-27100.00uncharacterized protein LOC103502077 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
AT4G29160.12.1e-0969.39SNF7 family protein [more]
AT4G29160.32.1e-0969.39SNF7 family protein [more]
AT2G19830.12.0e-0763.83SNF7 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035091.1MELO3C035091.1mRNA