MELO3C035061 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035061
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr11: 18106607 .. 18108848 (-)
RNA-Seq Expression	MELO3C035061
Synteny	MELO3C035061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTGGGCTGCATGGGAAGAGAGAGAGAGAGAGATTTGTTGCCTTATCATCGCCATCCGCCCTCTGCTGTCCCCTTGCCGTCGTTGCCGAGTTGTTCCACAGCCCACCGTCCTCCCTTCGTCGTCGTATTCTGCCACCGTCGCTGCTCTACATTCTGGTAAATAATTTATTCTTTTTTTTCTAAGTTAAATAAATGTATGTTCTTAATGTATATTGAATTTGTTTGCATGGATAGCGTTAAAATTGTTACAATGCATGTTTAAATATATATGAATTGTTTATTGAAATCGTTGGAAGTTTAGGAATAAAATTGTATGTATAAAATGTATATTGAAATTTGTTATAGGTTTAGGGTTGAAATTTTTTAAATTTATGTTTATATGTATTGAAATTGTTTGAAGTTTAGGAATGAAATTGTATGCATAAATTTTTAGATGTGTTGAAATTATATTGAAATGTATTGAAATTGTGATGATCAGAGAGGGGGTCGGTTGAAATTATATTAAAATGTATTGAAATTGTTGAATCGTTGAAATTGATAATTTTTAAATTGTTGAAATAGTTTAAATATATGAAATTGTTAAGAGGGGGCCTAGTTGAGTCACTTTCATTAATTTGTTGTAGCTATTATGCAGTTATGGTAGCCTTTAGTTTTTAATTGGTTATTATGTTTTGTTTATTGAAATTAAGTGTTAGTTATAATTATAGTAGCCTTTAGTAGTTTATAATTTGTTGAAGCCGTTAGGTAGCTTGTAAAGCTTGTTGATTGGAAGTGTTAGGTAGCTTGGAATGATTGAAGTAATATGAGGTTGTTCTGGTATGCTGCAGTTACGGTAGTTTTTTTAGTTTAAACTTAGTTGTAATGGAAGTTAGGATATTGGGTACTTCTAAGGTGTAGCTTATTCATTGAGTAAGCTTGAGCATTTGAGAGGAGGAATATAAGACTAATGAAACCTATTTATGTTCTAGGTCTTTAACAATGGACAACAGTTGGATGAAACTTAGGAATAAGTTCTCGATTGAGTATAGAGAATGAGTGTCCCAATTTTTAGAGGTTACAAAGTATCGCGTCGATGAGTATGGACGGACAAGGTATCCATGCAAAAGATGTATAACAAGGTGTCCCAATTTTTAGCGATTTACGAGTAAGTTTTTAAATTACCGTACATATATGTTACCTACACTATAGCAATGGCTCATGCTTGATTTTGCAAATCAAACATTTACTCGATTTGTTGAGCATCAAATGCTCAACACGTGGAAAGAGTTCAGGGGAGACAACCAAAGCCATTTTAAGAAGTCTAGTGATCCTAAACAAGCATGTGCCAACCCACCCCCAGATTTAAGTATCGTGTGGAAGATTGGCACTTCCCCTGCAATCACTACGTTAGTCGACAGTTTTAGGTGATTTACATTTTTTAATGTTCCTCGACATTATTTTATTTTTTGTTGTTTATATATAACATTTTATTGTTTGCATGTAGGAGCAGTCAAGGATTAACAGGGCTGCTAAAGCAAACCAGTCTTACAACTACAGTAGTGGATCCAAGTCATTTCTACAACGACAGCACGAGCTCGCTGAAAAACGAGGTCAACCAATCGATCGTGTGAAGTTGTTTAAAGAAACACACACATGGAATGGCCTGTTCATTTTGCAGGCGGCCACTGATGCGCATGTAAGTTTGTGAAAAACTTTTATCTTATTTTGTACTTTTATTTACAAGTTTGACTTAATTAAAAATTTTCTTGCAGACTCAAATGTTGGAACTTCAGTCCCAGCCCACCCTAAAAGGTTCTCAACCAATTTCTCGGGAGAGATATGCGAGGCCGTTTTGGGTAGACGACCGGGCTACTCAAAAGGTCTTTGGTTGGTGCCTTAGGCCAAAGTCCCGAAAGACTGCTGGCAATTCTTCATCTTCATCATATGAGCAAGATATGCACGCTAGGGAGGTTAGCAAAGTAAAAGCTCACCTTGATAATGCTCAACAATTAATTGAAGAACAACGAAGAACGTCGAAGTTGCATGTGCGACAAATGGAAGAAAGTACCGACAAACGGAAGAAATGAGGAAGATGATTGAGGAACTGAGTCAGGCATAGAGAGGACACTGATTCGATTGCAGTACGTATTTTTCAACTTTTAAGTTCTTTAATTTCTTATTGGGGATATATATCTAAATTTACTTTCATGTCATTGTAGGTTGGGAGCCTCGGGGAAACTAGTGTCTGTGGCGATTAG

mRNA sequence

ATGTCTTTGGGCTGCATGGGAAGAGAGAGAGAGAGAGATTTGTTGCCTTATCATCGCCATCCGCCCTCTGCTGTCCCCTTGCCGTCGTTGCCGAGTTGTTCCACAGCCCACCGTCCTCCCTTCGTCGTCGTATTCTGCCACCGTCGCTGCTCTACATTCTGGTAGGAGCAGTCAAGGATTAACAGGGCTGCTAAAGCAAACCAGTCTTACAACTACAGTAGTGGATCCAAGTCATTTCTACAACGACAGCACGAGCTCGCTGAAAAACGAGGTCAACCAATCGATCGTGTGAAGTTGTTTAAAGAAACACACACATGGAATGGCCTGTTCATTTTGCAGGCGGCCACTGATGCGCATACTCAAATGTTGGAACTTCAGTCCCAGCCCACCCTAAAAGGTTCTCAACCAATTTCTCGGGAGAGATATGCGAGGCCGTTTTGGGTAGACGACCGGGCTACTCAAAAGGTCTTTGGTTGGTGCCTTAGGCCAAAGTCCCGAAAGACTGCTGGCAATTCTTCATCTTCATCATATGAGCAAGATATGCACGCTAGGGAGGTTAGCAAAGTAAAAGCTCACCTTGATAATGCTCAACAATTAATTGAAGAACAACGAAGAACGTCGAAGTTGCATGTTGGGAGCCTCGGGGAAACTAGTGTCTGTGGCGATTAG

Coding sequence (CDS)

ATGTTGGAACTTCAGTCCCAGCCCACCCTAAAAGGTTCTCAACCAATTTCTCGGGAGAGATATGCGAGGCCGTTTTGGGTAGACGACCGGGCTACTCAAAAGGTCTTTGGTTGGTGCCTTAGGCCAAAGTCCCGAAAGACTGCTGGCAATTCTTCATCTTCATCATATGAGCAAGATATGCACGCTAGGGAGGTTAGCAAAGTAAAAGCTCACCTTGATAATGCTCAACAATTAATTGAAGAACAACGAAGAACGTCGAAGTTGCATGTTGGGAGCCTCGGGGAAACTAGTGTCTGTGGCGATTAG

Protein sequence

MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDMHAREVSKVKAHLDNAQQLIEEQRRTSKLHVGSLGETSVCGD

Homology

[Close]

BLAST of MELO3C035061 vs. NCBI nr
Match: KAA0062065.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1   MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
           MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM
Sbjct: 113 MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 172

Query: 61  HAREVSKVKAHLDNAQQLIEEQRRTSKLHVGSLGETS 98
           HAREVSKVKAHLDNAQQLIEEQRRTSKLH+  + E++
Sbjct: 173 HAREVSKVKAHLDNAQQLIEEQRRTSKLHMRQMEEST 209

[Close]

BLAST of MELO3C035061 vs. NCBI nr
Match: TYK04955.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 3.1e-31
Identity = 76/101 (75.25%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
           MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM
Sbjct: 113 MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 172

Query: 61  HAREVSKVKAHLDNAQQLIEEQRRTSKLHVGSLGETSVCGD 102
           HARE                         VGSLGETSVCGD
Sbjct: 173 HARE-------------------------VGSLGETSVCGD 188

[Close]

BLAST of MELO3C035061 vs. NCBI nr
Match: KAA0067874.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK14900.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-15
Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
           MLELQSQPTL+GSQP +R               K  GW  RPKS K AG+S SSSYEQ+M
Sbjct: 73  MLELQSQPTLEGSQPPTRNEICEAVSGRRPGYSKGLGWSPRPKSLKAAGSSLSSSYEQEM 132

Query: 61  HAREVSKVKAHLDNAQQLIEEQ 83
           H REV+K+KAHLDNAQ+L +EQ
Sbjct: 133 HVREVTKLKAHLDNAQELTKEQ 154

[Close]

BLAST of MELO3C035061 vs. NCBI nr
Match: KAA0046537.1 (hypothetical protein E6C27_scaffold114G00550 [Cucumis melo var. makuwa] >TYK28721.1 hypothetical protein E5676_scaffold403G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-09
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 1  MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
          MLELQ Q T KGSQP+SR+              K FGW  +PKS+K AG+SS SSYEQ+M
Sbjct: 1  MLELQFQTTSKGSQPLSRDEICETILGRQLGYSKGFGWGPKPKSQK-AGSSSLSSYEQEM 60

Query: 61 HAREVSKVKAHLDNAQQ 78
          H+REV +++A  +NAQ+
Sbjct: 61 HSREVRELRASFENAQR 76

[Close]

BLAST of MELO3C035061 vs. NCBI nr
Match: KAA0025728.1 (cytochrome P450 CYP82D47-like [Cucumis melo var. makuwa] >TYK06158.1 cytochrome P450 CYP82D47-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-09
Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 1   MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
           MLELQSQP L+ SQP+SR+              K  GW  +PKSRK+  N+SS+S+   +
Sbjct: 73  MLELQSQPILEDSQPLSRDEICEKVLSRQPGYSKGLGWGPKPKSRKSCVNNSSTSF---L 132

Query: 61  HAREVSKVKA-------HLDNAQQLIEEQRRTSKLH 90
            AREV + KA        L+ A+ +IEEQRRTS+LH
Sbjct: 133 QAREVKEAKALIKPQRVELEEAKSMIEEQRRTSELH 165

[Close]

BLAST of MELO3C035061 vs. ExPASy TrEMBL
Match: A0A5A7V844 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004090 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 6.4e-43
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1   MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
           MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM
Sbjct: 113 MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 172

Query: 61  HAREVSKVKAHLDNAQQLIEEQRRTSKLHVGSLGETS 98
           HAREVSKVKAHLDNAQQLIEEQRRTSKLH+  + E++
Sbjct: 173 HAREVSKVKAHLDNAQQLIEEQRRTSKLHMRQMEEST 209

[Close]

BLAST of MELO3C035061 vs. ExPASy TrEMBL
Match: A0A5D3C0S3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001720 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 76/101 (75.25%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
           MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM
Sbjct: 113 MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 172

Query: 61  HAREVSKVKAHLDNAQQLIEEQRRTSKLHVGSLGETSVCGD 102
           HARE                         VGSLGETSVCGD
Sbjct: 173 HARE-------------------------VGSLGETSVCGD 188

[Close]

BLAST of MELO3C035061 vs. ExPASy TrEMBL
Match: A0A5A7VKD4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1779G00150 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15
Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
           MLELQSQPTL+GSQP +R               K  GW  RPKS K AG+S SSSYEQ+M
Sbjct: 73  MLELQSQPTLEGSQPPTRNEICEAVSGRRPGYSKGLGWSPRPKSLKAAGSSLSSSYEQEM 132

Query: 61  HAREVSKVKAHLDNAQQLIEEQ 83
           H REV+K+KAHLDNAQ+L +EQ
Sbjct: 133 HVREVTKLKAHLDNAQELTKEQ 154

[Close]

BLAST of MELO3C035061 vs. ExPASy TrEMBL
Match: A0A5A7SHT5 (Cytochrome P450 CYP82D47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00070 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.3e-10
Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 1   MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
           MLELQSQP L+ SQP+SR+              K  GW  +PKSRK+  N+SS+S+   +
Sbjct: 73  MLELQSQPILEDSQPLSRDEICEKVLSRQPGYSKGLGWGPKPKSRKSCVNNSSTSF---L 132

Query: 61  HAREVSKVKA-------HLDNAQQLIEEQRRTSKLH 90
            AREV + KA        L+ A+ +IEEQRRTS+LH
Sbjct: 133 QAREVKEAKALIKPQRVELEEAKSMIEEQRRTSELH 165

[Close]

BLAST of MELO3C035061 vs. ExPASy TrEMBL
Match: A0A5D3DYR4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00410 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.3e-10
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 1  MLELQSQPTLKGSQPISRERYARPFWVDDRATQKVFGWCLRPKSRKTAGNSSSSSYEQDM 60
          MLELQ Q T KGSQP+SR+              K FGW  +PKS+K AG+SS SSYEQ+M
Sbjct: 1  MLELQFQTTSKGSQPLSRDEICETILGRQLGYSKGFGWGPKPKSQK-AGSSSLSSYEQEM 60

Query: 61 HAREVSKVKAHLDNAQQ 78
          H+REV +++A  +NAQ+
Sbjct: 61 HSREVRELRASFENAQR 76

The following BLAST results are available for this feature:

BLAST of MELO3C035061 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035061 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062065.1	1.3e-42	92.78	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK04955.1	3.1e-31	75.25	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0067874.1	4.0e-15	59.76	NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK14900.1 NBS-LRR t...	[more]
KAA0046537.1	1.9e-09	51.95	hypothetical protein E6C27_scaffold114G00550 [Cucumis melo var. makuwa] >TYK2872...	[more]
KAA0025728.1	1.9e-09	45.83	cytochrome P450 CYP82D47-like [Cucumis melo var. makuwa] >TYK06158.1 cytochrome ...	[more]

BLAST of MELO3C035061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V844	6.4e-43	92.78	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3C0S3	1.5e-31	75.25	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7VKD4	1.9e-15	59.76	NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SHT5	9.3e-10	45.83	Cytochrome P450 CYP82D47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5D3DYR4	9.3e-10	51.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C035061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035061.1	MELO3C035061.1	mRNA