MELO3C035026.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C035026.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTranspos_assoc domain-containing protein
Locationchr11: 16903154 .. 16904638 (-)
RNA-Seq ExpressionMELO3C035026.jh1
SyntenyMELO3C035026.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACAACAAAAAAATCTTGTAAGTGAGATATTTGACATGTTTCATGACCATTTCACTAGAGACAACCTCAAAGCAATCTTAATGGTTTCTTTTCTTGATCTCTCTAATATTCTTCTAATACTTGTTTTGGACAACATCGGTTTTTCTTTAAGACAAGAAGTTTGAACCATTTTGAGTTATTCCATAAAATCAATTGACCGAATTTGGTTAAATCAACTTTGCCTTTTTCTTCTTCTTTACTCATATTGCTCACACTAATATCAACAATAATATAGCGATAAGGATATGGAAAGGGCATATGTATGTTGACTCTATGGCACTTAATTATCACTTTTTCTTTTCTTTCGTAGCTTTCTTCATACTTAGTTCTTTCCATTGTCTTCTATTCTTTTATTACTCTTGGCCTATTTGTGAACATTATCTTTGAATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTCTAAGTATTGTCTTTGTTTCTATCCTTGTTGGGTTTTATTGAGTTTCAGGTGGACAATCCTAACATAGCCTTAGGTAAAGTGAGGCATTGAACTTAGATAAAGCCAGGCCTCCACCATAATGGGAATCACCTTATTTTGTTTTAATATATACATATCTATACACACATTTGAGAAGGAAATGCTTTACACACACACAAGAGACAATGAGTGCCTATGCAAGTTCTGCTCTCCTTGACTATTCTTGTGACTATTTCATGATCAAGTCAATTCCATCATGTTCTAAAGAGATATTGATACATTTGAAGAGTTTTATATGTTTTAGAAGTGCATCTTTATAGGTTCCAAATGCAATTTGAGACAACTCTTACTGGCAAGTTATAAGAAGCCAAACCTTTATACATAATGTCTGGAGAAAAATTGTTCAATAAATAGCGGGTTTATTTGAACAGGTACAACCACGTAATAATTTATTAGACTACCAATAATAAGAAGTAATTTTCCATTTTTAAATGATGAACATCTGCATCTTTTTTTAGAGCCACAGACGAGTATATGAAAGGAGCATGGGAGTTCGTAGAGAAAGTAAAGAAGGATGCAACATATGTGGATTTGATTATGTGCCCTTGCAAGGATTGTAGAAACATGAATCATCAATCCTTTGAATTACTTATGAGCATTTAGTAATTAAGGGAATGGACCCAACATATATTTGGTACCATTATGGGAGGAAGTTTGTGTAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATCAATCTACATATAAAAGAGAATAAGTAAATGTTGAGCCTACTTTTTCAAGTACTGATAGTGAACTTCATCAAAAAAATGAAAAATGCAAAAGCTTCCTTATATCCCAGTTGTACAAAATTCACAAAGATGTCAGCTACGGTGGCCTTGTATAAACATAAAGCTTTGAGTGGTTGGTCTGATAAAAGTTGTAGTGACTTATTGGAATTA

mRNA sequence

ATGGCCGACAACAAAAAAATCTTGTAAGTGAGATATTTGACATGTTTCATGACCATTTCACTAGAGACAACCTCAAAGCAATCTTAATGGTTTCTTTTCTTGATCTCTCTAATATTCTTCTAATACTTGTTTTGGACAACATCGAAGTGCATCTTTATAGGTTCCAAATGCAATTTGAGACAACTCTTACTGGCAAAGCCACAGACGAGTATATGAAAGGAGCATGGGAGTTCGTAGAGAAAGTAAAGAAGGATGCAACATATGTGGATTTGATTATGTGCCCTTGCAAGGATTGTAGAAACATGAATCATCAATCCTTTGAATTACTTATGAGCATTTAGTAATTAAGGGAATGGACCCAACATATATTTGGTACCATTATGGGAGGAAGTTTGTGTAAGGGAAGAAATTGAGGATGTAGATATGTTTGATGTATTTAACATGTATCAATCTACATATAAAAGAGAATAAGTAAATGTTGAGCCTACTTTTTCAAGTACTGATAGTGAACTTCATCAAAAAAATGAAAAATGCAAAAGCTTCCTTATATCCCAGTTGTACAAAATTCACAAAGATGTCAGCTACGGTGGCCTTGTATAAACATAAAGCTTTGAGTGGTTGGTCTGATAAAAGTTGTAGTGACTTATTGGAATTA

Coding sequence (CDS)

ATGTTTCATGACCATTTCACTAGAGACAACCTCAAAGCAATCTTAATGGTTTCTTTTCTTGATCTCTCTAATATTCTTCTAATACTTGTTTTGGACAACATCGAAGTGCATCTTTATAGGTTCCAAATGCAATTTGAGACAACTCTTACTGGCAAAGCCACAGACGAGTATATGAAAGGAGCATGGGAGTTCGTAGAGAAAGTAAAGAAGGATGCAACATATGTGGATTTGATTATGTGCCCTTGCAAGGATTGTAGAAACATGAATCATCAATCCTTTGAATTACTTATGAGCATTTAG

Protein sequence

MFHDHFTRDNLKAILMVSFLDLSNILLILVLDNIEVHLYRFQMQFETTLTGKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELLMSI
Homology
[Close]
BLAST of MELO3C035026.jh1 vs. NCBI nr
Match: KAA0058325.1 (hypothetical protein E6C27_scaffold409G00020 [Cucumis melo var. makuwa] >TYK22477.1 hypothetical protein E5676_scaffold19523G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 2.84e-22
Identity = 39/46 (84.78%), Postives = 44/46 (95.65%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +ATDEYMKGAWEFVEKVKKDAT VDLIMCPCKDCRNM+HQSF+++
Sbjct: 10 NRATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVV 55

[Close]
BLAST of MELO3C035026.jh1 vs. NCBI nr
Match: KGN47253.1 (hypothetical protein Csa_017000 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 6.40e-22
Identity = 37/46 (80.43%), Postives = 44/46 (95.65%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +ATDEYMKGAWEF+EKVKKD TYVDLIMCPCKDCR+M+HQSF+++
Sbjct: 15 NRATDEYMKGAWEFIEKVKKDVTYVDLIMCPCKDCRDMSHQSFDIV 60

[Close]
BLAST of MELO3C035026.jh1 vs. NCBI nr
Match: KAA0055179.1 (uncharacterized protein E6C27_scaffold80G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 1.56e-17
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +ATDEYMKG WEFVEKVKKDAT VDLIMCP KDCRNM+HQSF+++
Sbjct: 10 NRATDEYMKGVWEFVEKVKKDATDVDLIMCPSKDCRNMSHQSFDVV 55

[Close]
BLAST of MELO3C035026.jh1 vs. NCBI nr
Match: KAA0025471.1 (uncharacterized protein E6C27_scaffold417G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 4.22e-17
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +A DEYMKGAWEF+EKVKKDAT VDLIMCPCKDCRNM+HQS +++
Sbjct: 10 NRAKDEYMKGAWEFMEKVKKDATDVDLIMCPCKDCRNMSHQSLDVV 55

[Close]
BLAST of MELO3C035026.jh1 vs. NCBI nr
Match: KAA0056266.1 (uncharacterized protein E6C27_scaffold226G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 3.93e-09
Identity = 23/46 (50.00%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +AT+EY++GAW+F+++V+     +D I CPCK CRNMNHQ+F+++
Sbjct: 10 NRATNEYLRGAWDFMKQVENMLGGIDKIPCPCKTCRNMNHQTFDVV 55

[Close]
BLAST of MELO3C035026.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DFK8 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19523G00030 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.38e-22
Identity = 39/46 (84.78%), Postives = 44/46 (95.65%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +ATDEYMKGAWEFVEKVKKDAT VDLIMCPCKDCRNM+HQSF+++
Sbjct: 10 NRATDEYMKGAWEFVEKVKKDATDVDLIMCPCKDCRNMSHQSFDVV 55

[Close]
BLAST of MELO3C035026.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KCH8 (Transpos_assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G237080 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.10e-22
Identity = 37/46 (80.43%), Postives = 44/46 (95.65%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +ATDEYMKGAWEF+EKVKKD TYVDLIMCPCKDCR+M+HQSF+++
Sbjct: 15 NRATDEYMKGAWEFIEKVKKDVTYVDLIMCPCKDCRDMSHQSFDIV 60

[Close]
BLAST of MELO3C035026.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UNZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00030 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 7.54e-18
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +ATDEYMKG WEFVEKVKKDAT VDLIMCP KDCRNM+HQSF+++
Sbjct: 10 NRATDEYMKGVWEFVEKVKKDATDVDLIMCPSKDCRNMSHQSFDVV 55

[Close]
BLAST of MELO3C035026.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SMK7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00730 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.04e-17
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +A DEYMKGAWEF+EKVKKDAT VDLIMCPCKDCRNM+HQS +++
Sbjct: 10 NRAKDEYMKGAWEFMEKVKKDATDVDLIMCPCKDCRNMSHQSLDVV 55

[Close]
BLAST of MELO3C035026.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UPM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00340 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.90e-09
Identity = 23/46 (50.00%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 51 GKATDEYMKGAWEFVEKVKKDATYVDLIMCPCKDCRNMNHQSFELL 96
           +AT+EY++GAW+F+++V+     +D I CPCK CRNMNHQ+F+++
Sbjct: 10 NRATNEYLRGAWDFMKQVENMLGGIDKIPCPCKTCRNMNHQTFDVV 55

The following BLAST results are available for this feature:
BLAST of MELO3C035026.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058325.12.84e-2284.78hypothetical protein E6C27_scaffold409G00020 [Cucumis melo var. makuwa] >TYK2247... [more]
KGN47253.16.40e-2280.43hypothetical protein Csa_017000 [Cucumis sativus][more]
KAA0055179.11.56e-1780.43uncharacterized protein E6C27_scaffold80G00030 [Cucumis melo var. makuwa][more]
KAA0025471.14.22e-1778.26uncharacterized protein E6C27_scaffold417G00730 [Cucumis melo var. makuwa][more]
KAA0056266.13.93e-0950.00uncharacterized protein E6C27_scaffold226G00340 [Cucumis melo var. makuwa][more]
BLAST of MELO3C035026.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035026.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DFK81.38e-2284.78Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0KCH83.10e-2280.43Transpos_assoc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G237... [more]
A0A5A7UNZ27.54e-1880.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SMK72.04e-1778.26Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7UPM11.90e-0950.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C035026.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029480Transposase-associated domainPFAMPF13963Transpos_assoccoord: 51..92
e-value: 2.6E-7
score: 30.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035026.jh1.t1MELO3C035026.jh1.t1mRNA