MELO3C035005.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C035005.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description3'-5' exonuclease domain-containing protein
Locationchr11: 15061290 .. 15064258 (-)
RNA-Seq ExpressionMELO3C035005.jh1
SyntenyMELO3C035005.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTGCCGCCTCTTTTGTCTGCGTGTCATTTCGTCGTTGCCCGTGGTTGCTCGTTGCTCATGGTTGCGCGTTCTGTTCGTGGTCGCTCGCAAGCAGGTTCGTTGCTTCATCGTGGCCCTTTCCCGTGGTTACACGGCAGCTGTTGATGTATTAGAGCATTTCTCTATTCACCAATCTGGGCAGTCTCTTCTCTATAGCATGCTGCAGAACAATGAATTTAAAGCAGCTGAGAAATGGGCCACTTTCATGGGAAATCCAATGTTACATTTGCTTGTCCAGGACTTGATAAATAGAAACAAGCTAAAAAGTGCATATGGAGTTATAAAGAAAAATGATTTGCAGAAGGAATTTCCCGATGTCTATCAGAAGTGTAAGAGAGGTACTTTGGTAACCCCTATGCTGTATTTTTCTTCTTTGAACTCAAATTTTCATGTGCTCTTGGTATTTTTATATGTCTCCATTGGCTTAAAAGCCTATGAATAATTATGATTCTTACTCAGCTCCTTGAAGAATTTAGCCGAAGAAGGATGTTGGGATGGTGCTGAGGCAAAAATAAACAGCAATAGGCAATTTCTTGAATATTTGGTTAGTATACTCCATACATTCATTACTCATATTTTGAAGATTTTTAAGCAATACATATACTTCATTACAAGCAAAATGTCTTACCTGTTGGACCTGAGTTCTGGGTTTTTGACAAATAGTTTTTAAAGCTCAAAGTCTTCATATCTTTACGTAACCTTTATGTGTTTTAAGGTTTACTTGGCATTGGAAGCTGGTTATTTCAAAAAAGTTGATGAACTTTGCAATAGGTACTCCCTTACAGGTTTTCTGAATAACAAAGGTATGACGTCTGTACCATAGTCTCTTGCACTTAGAAGCTTCATTGCATATGTTGGGCCATTTTTCCAGCTTTAATAAGATCAATATCTCATGTTAAACTATTATTATTCAGAAGTGTCTCTACGAACTATCTTGTTGGCCTTTGTCCATTCCCTATTACCCTTAGTCATTCCTTTTTACCTTTTGTTCTTTATTGCCCCAAGTTTGTCCACTTTATTTGTTTTTTAATTGGATAAATATAGGCATCTCGCAGAAAATTTTGCAAGTAGAAAATAAAGAGCTAAAAGGCGCTGCAAGAAAACAAAGAATTGGTTGAATGCCTCTAGGAATTGCTTCCATGGGCATTGAGAAGTGGAGTTGTCGGATCTAGTGAATAAACCACAGAAATCCTTATCATAATTCCTAGGTGATTAAAGCTTTTGTTAGGACACTGGTCATGTTCTTTTATTCCTAAAAAAGATTTAAACTGCCTTCATAATAAGGAAAAGAATGTACTTGCTGACCAAAAAAGGTAAAACATAACCTAGTGAGCTACACAATTTTACCATGGCATTAAGAAGGGCCTTTTCCTTCTCATGTTGATCACCCAATGAAGGAAGGTAGAGTATTTGTTACCCTTAGTGAGCTACTCCATTTTACCTGTGTCTTGACAAAGAGAAAATTAGTGTAAACGTAAAATTAATATCATTTAGCCTAAACTAATTTATTATATTTTTAGCTTATTAACACATTATTGTATTAAAAACTTAGGAACACAAATTATCTTTGACCTGCCTAATCTTCTGGGCAGTTATCAATTCAATTGTAAATTATCTTTGAGTAACATAGGATGGTTTTCACTATTAGGGACAAATCTTGGTTTCTGTACATTATATGACTTCAGTGTTTTTGAACATTATCTACAAAAAAAAATTAGCATGCTTCAAATCACTACAGTTAAATTTTATTTGCATTGCACAAAATTTTACTTGTTCTGATTCATATTGGTTAATCTAATCAGCATATTGGTTTTCTGTAGAACGTAAGGGAAGTTATGGACAGAAGTTACCGAACCACTATTTGAATCTTAATCAACTAATTGCTGGAGATATTTTATGGGTTGACAATGCTGTTGCTTTATATGACTTCAGTGGGAGTTGACATGGTTGCGCATATATCCCTGCAGCATGAAAATATGTTCAAGATATCCTTCTATCTATCATGTTAAAATTAGATTTATACTTTATTTATTCCATTGTATGATATTGCTCTCATTGAGATTTTTTTTCGTACTCATGCTCTGCATATAGTTTTGTTCCTTGAGGATCAGCTTGATTCCAGCCAAACCTTTATTATATCATTCCCTTGTTTGCGTCACTACTTTTGGAATCGTTCAAGTTTTACAAGAATAGAATGCAACCTCTATTAGACTGTGAAATATAAATATAAATTGCCAACAAAGTTTACTCTTTTACTTTTCTTTCTTAGAAAGGGAAAAAGTTGAAGACTTGTTTGTTTTCTGATATTTACTAGTGATTTTTGTTTAATTTAATTTTCTTTTTTTCCTTATCCTTTTTATCCATTCGCTTTCTAACTCAGTGCATATAATGTGCAGTGGTCCTGGTAAACTATTGTTTTAGGCTTCATTTTCCTATTGTTTCTTCTAGAAACAAGGCATATAGTAAGTGGATTCAACAAATTATATTTATTGTTGTGATTTATGTTTGCATAATGGCTCTTTCTAGTTGTTTTTATTGTCGGTGTAAACATATTTATTTGTTTATTAGAAGTATACGTATATGGGCTATTTGCAACATTAAGCATTTAGGTAATTTATGTATTACAGTGTCCTTTACAAGTCGGAACCACTAAATTGGGAGTTATGATGTGGAAGTATCTTCTTTGAGGCATGAAATAAAAGAGTTAAATGAGAGGTTGGAAACCGCAAATGCAAGGGCTCAATCGTTTGAGAAGAAGCAAGGATATTGCAACAAGAAAAAGTTCATATTGTAACTTAGACATGTATATTTTGTTTATATTAAACAAGAAAAGGTTCATATTGTAGCTTAGACATGTATATGGTTCATTGATATATATATATGCAATTTCTTTGATGGAAAGATTGAGTTTTT

mRNA sequence

CATTGCCGCCTCTTTTGTCTGCGTGTCATTTCGTCGTTGCCCGTGGTTGCTCGTTGCTCATGGTTGCGCGTTCTGTTCGTGGTCGCTCGCAAGCAGGTTCGTTGCTTCATCGTGGCCCTTTCCCGTGGTTACACGGCAGCTGTTGATGTATTAGAGCATTTCTCTATTCACCAATCTGGGCAGTCTCTTCTCTATAGCATGCTGCAGAACAATGAATTTAAAGCAGCTGAGAAATGGGCCACTTTCATGGGAAATCCAATGTTACATTTGCTTGTCCAGGACTTGATAAATAGAAACAAGCTAAAAAGTGCATATGGAGTTATAAAGAAAAATGATTTGCAGAAGGAATTTCCCGATGTCTATCAGAAGTGTAAGAGAGCTCCTTGAAGAATTTAGCCGAAGAAGGATGTTGGGATGGTGCTGAGGCAAAAATAAACAGCAATAGGCAATTTCTTGAATATTTGGTTTACTTGGCATTGGAAGCTGGTTATTTCAAAAAAGTTGATGAACTTTGCAATAGGTACTCCCTTACAGGTTTTCTGAATAACAAAGAACGTAAGGGAAGTTATGGACAGAAGTTACCGAACCACTATTTGAATCTTAATCAACTAATTGCTGGAGATATTTTATGGGTTGACAATGCTGTTGCTTTATATGACTTCAGTGGGAGTTGACATGGTTGCGCATATATCCCTGCAGCATGAAAATATGTTCAAGATATCCTTCTATCTATCATGTTAAAATTAGATTTATACTTTATTTATTCCATTGTATGATATTGCTCTCATTGAGATTTTTTTTCGTACTCATGCTCTGCATATAGTTTTGTTCCTTGAGGATCAGCTTGATTCCAGCCAAACCTTTATTATATCATTCCCTTGTTTGCGTCACTACTTTTGGAATCGTTCAAGTTTTACAAGAATAGAATGCAACCTCTATTAGACTGTGAAATATAAATATAAATTGCCAACAAAGTTTACTCTTTTACTTTTCTTTCTTAGAAAGGGAAAAAGTTGAAGACTTGTTTGTTTTCTGATATTTACTAGTGATTTTTGTTTAATTTAATTTTCTTTTTTTCCTTATCCTTTTTATCCATTCGCTTTCTAACTCAGTGCATATAATGTGCAGTGGTCCTGGTAAACTATTGTTTTAGGCTTCATTTTCCTATTGTTTCTTCTAGAAACAAGGCATATAGTAAGTGGATTCAACAAATTATATTTATTGTTGTGATTTATGTTTGCATAATGGCTCTTTCTAGTTGTTTTTATTGTCGGTGTAAACATATTTATTTGTTTATTAGAAGTATACGTATATGGGCTATTTGCAACATTAAGCATTTAGGTAATTTATGTATTACAGTGTCCTTTACAAGTCGGAACCACTAAATTGGGAGTTATGATGTGGAAGTATCTTCTTTGAGGCATGAAATAAAAGAGTTAAATGAGAGGTTGGAAACCGCAAATGCAAGGGCTCAATCGTTTGAGAAGAAGCAAGGATATTGCAACAAGAAAAAGTTCATATTGTAACTTAGACATGTATATTTTGTTTATATTAAACAAGAAAAGGTTCATATTGTAGCTTAGACATGTATATGGTTCATTGATATATATATATGCAATTTCTTTGATGGAAAGATTGAGTTTTT

Coding sequence (CDS)

ATGCTGCAGAACAATGAATTTAAAGCAGCTGAGAAATGGGCCACTTTCATGGGAAATCCAATGTTACATTTGCTTGTCCAGGACTTGATAAATAGAAACAAGCTAAAAAGTGCATATGGAGTTATAAAGAAAAATGATTTGCAGAAGGAATTTCCCGATGTCTATCAGAAGTGTAAGAGAGCTCCTTGA

Protein sequence

MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRAP
Homology
[Close]
BLAST of MELO3C035005.jh1 vs. NCBI nr
Match: KAA0060856.1 (exonuclease mut-7-like protein isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (320), Expect = 5.28e-35
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR
Sbjct: 63  MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 122

[Close]
BLAST of MELO3C035005.jh1 vs. NCBI nr
Match: TYK01099.1 (exonuclease mut-7-like protein isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (320), Expect = 5.85e-35
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR
Sbjct: 59  MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 118

[Close]
BLAST of MELO3C035005.jh1 vs. NCBI nr
Match: KAA0050943.1 (exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa] >TYK10290.1 exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (306), Expect = 8.88e-31
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK 
Sbjct: 175 MLQNNEFKAAEKWATFMGKPMLHLLVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKE 234

[Close]
BLAST of MELO3C035005.jh1 vs. NCBI nr
Match: XP_008450552.1 (PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo] >XP_008450553.1 PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo])

HSP 1 Score: 122 bits (306), Expect = 1.20e-30
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK 
Sbjct: 217 MLQNNEFKAAEKWATFMGKPMLHLLVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKE 276

[Close]
BLAST of MELO3C035005.jh1 vs. NCBI nr
Match: XP_031736264.1 (uncharacterized protein LOC101205010 isoform X2 [Cucumis sativus])

HSP 1 Score: 119 bits (298), Expect = 1.23e-29
Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMG  MLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK 
Sbjct: 172 MLQNNEFKAAEKWATFMGKQMLHLLVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKE 231

[Close]
BLAST of MELO3C035005.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V2X1 (Exonuclease mut-7-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00910 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 2.56e-35
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR
Sbjct: 63  MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 122

[Close]
BLAST of MELO3C035005.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BSN1 (Exonuclease mut-7-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001260 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 2.83e-35
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR
Sbjct: 59  MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 118

[Close]
BLAST of MELO3C035005.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CG08 (Exonuclease mut-7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004410 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 4.30e-31
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK 
Sbjct: 175 MLQNNEFKAAEKWATFMGKPMLHLLVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKE 234

[Close]
BLAST of MELO3C035005.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BPE9 (uncharacterized protein LOC103492118 OS=Cucumis melo OX=3656 GN=LOC103492118 PE=4 SV=1)

HSP 1 Score: 122 bits (306), Expect = 5.81e-31
Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK 
Sbjct: 217 MLQNNEFKAAEKWATFMGKPMLHLLVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKE 276

[Close]
BLAST of MELO3C035005.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LWB0 (3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G561980 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 7.52e-30
Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           MLQNNEFKAAEKWATFMG  MLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK 
Sbjct: 217 MLQNNEFKAAEKWATFMGKQMLHLLVQELINRNKLKSAYGVIKKNDLQKEFPDVYQKCKE 276

[Close]
BLAST of MELO3C035005.jh1 vs. TAIR 10
Match: AT1G56310.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 4.5e-15
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 0 

Query: 1   MLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKR 60
           M+++  F+AAE+WATFMG P L +LVQ+  +RN LK AY +I KN LQ +FP++Y KCK 
Sbjct: 220 MVEDKNFQAAERWATFMGRPSLCILVQEYGSRNMLKQAYNIINKNYLQHDFPELYHKCKE 279

Query: 61  A 62
           +
Sbjct: 280 S 280

The following BLAST results are available for this feature:
BLAST of MELO3C035005.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0060856.15.28e-3598.36exonuclease mut-7-like protein isoform X3 [Cucumis melo var. makuwa][more]
TYK01099.15.85e-3598.36exonuclease mut-7-like protein isoform X3 [Cucumis melo var. makuwa][more]
KAA0050943.18.88e-3193.44exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa] >TYK10290.1... [more]
XP_008450552.11.20e-3093.44PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo] >XP_008450553.1 P... [more]
XP_031736264.11.23e-2991.80uncharacterized protein LOC101205010 isoform X2 [Cucumis sativus][more]
BLAST of MELO3C035005.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C035005.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V2X12.56e-3598.36Exonuclease mut-7-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A5D3BSN12.83e-3598.36Exonuclease mut-7-like protein isoform X3 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A5D3CG084.30e-3193.44Exonuclease mut-7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3BPE95.81e-3193.44uncharacterized protein LOC103492118 OS=Cucumis melo OX=3656 GN=LOC103492118 PE=... [more]
A0A0A0LWB07.52e-3091.803'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G... [more]
BLAST of MELO3C035005.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G56310.14.5e-1554.10Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 1..59
NoneNo IPR availablePANTHERPTHR13620:SF91SUBFAMILY NOT NAMEDcoord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035005.jh1.t2MELO3C035005.jh1.t2mRNA
MELO3C035005.jh1.t1MELO3C035005.jh1.t1mRNA