MELO3C035004 (gene) Melon (DHL92) v4

Overview
NameMELO3C035004
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Description26S protease regulatory subunit 8-like protein A
Locationchr11: 14118727 .. 14122722 (-)
RNA-Seq ExpressionMELO3C035004
SyntenyMELO3C035004
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTGGGACCTCACCGACTTTATCATCAGAATGTCTACAGGTGGAAATTAATGTCGGAGTTTAAAACGAAAGTAAGAAAATAGAAAGGAAAAAGGCCTTTCTAACCTTAGATGAAGAGGTATGTGTATTTTGACTTTCTATCCTTTGGTAAGTTGTTTTTTCCTAATCATTTATCTTCACGATTTTGATATTGTAAGATTTTTCTTGAATCTATGTTGCATTTCCTTGTTGCATATGTGCAATTCGTAATTTAAAGATGACCTTGGATTGGGTTGTGTATTTTTATTTCTTGAGTGTTATTTTCATTACTTTTGGTTTACACTGTTAACAAGCACCTTCGCCTATATGTCTTCCATTAAAATTTAGAAAATAGAGAATGGAAAAAAAATTAGAAGAAAGTAATATAGAAAATTTTATACGCCCATTATTGATTAAAGAAAAGAGAAAGAATAACTTCATACAGAACAACTAAGTGAGCATCATCTGAGACAACAATTTATATTTTCTTTGCCCTTTATTTAAGTGGGATTCCGTGGTTTTGTCTAACTCTACTGCAATAGTTGGTGTTTCAGCAAAGTAGTTTCTTGTAAACCAAGTTTTTTCTTGGAATAACGTTGTAAACCTTGTGTTTTCTTTGTATCCTTGCAAAAGGTTATCAAAATTTGAAATAAAGCTAACATTTTTCTGTTTTTTTGGAGTACTGTTCATATGCAAACTTAGTGCAGAAAAACGTTATTCCAAACTTAGTGCAGAAAATGTTTTTCAAAAAGTAATATAGATTTTCTCTTCCAATTTACTTTTCAGCTTATAGGATTGCATAGCTCACCATCCAAAGAATTTTGCTTCATTCCATTGTTTAGTTGCAGCTGGGATAGTTTTCTCATGTTTCTACATTCTAAAATGGAATCCATATCTCTTTCAAACCTATTTTTTCATCTTTGAATCTCTAGCATTTTTAGTATAATCCTTTGTTTGTTTCATTGTTGTCTCTTCCTTCATCTACACAGATTGACGTTTGGGCTTTTCCAAAGCCATTCTAATTTCTAGAATGGATTGGAATGAATGCAATGCTAGTGTTTGTAATGGCAGCTCAGGGAGTTTTGTAGCTTTTATCAATGGATGGTACTAGAAAGATCTTGAAATATCCTTAGTAAGTAACATCATCTCTCGACACGCCTTGTAAAATCGTTGTATGCATTCTTCAAATGATTTAGATTATGTTAAGAAATGATGGATTATTAATAATGTAAACAAGTTCATTGGATTCAAAAGCATATATTTATCAATGTTTGACATTCAAGAAAATTGGGGACTCTTCTGTATGTGATATTTGCTGAAATAGCATTCTGGGCAATGGTAGCTGAGATTTTTTATTTGATTACGAATGAGTATAAATTGTTACAAGCAATGGAGAACTGGTAAGCTTTCTTTTCATTTGTTATGTTTTAAAGATATGAATGAAGGCTACATAAAGTCTTTCCATTATTCTTTCTGGTGGTGGGTGGTCCTCCAAGTTATTTATAAGTTAGAAATTTTGTTTTAGTTTAAGAAAAAGTTATAGAACTTATATGTTCATCTTGAATTAGGACAAAATAGTAAGTTTTTTTTTTAATTTTATTTTACTGTGAGGTGGTAGGTGGGTTAGACACTGCCTTTTCTTTATCATATGTCTATTTTATTTTTCTTTCTAATCACCGATTTAATGATTTTGAAGATGATAGATTAACATAAACATACATGTAGGTTGTAAATATATTATTCATGATCGGGAGATGAAGGAGAGATATGTTTAATGAATGCCCCTACAAATTTTTTGTGTAACTTACTAGGACGTTGATTCAACCACCACCACTTGAAGATCAGAGCATACTTGGTTCAAGCACAATGAAACATGGACGGGTGGATTATGAATTCTTTTTTAGAATCTACAACGGCATTTAGGTCTTTCACAATTAGATTATGGATTGTTTTTTATGTACTTTTTTGGTAAGTTTATCAAGTACGTAATCTATAACTGAATTGTGTGATATTTCTTTTATTAGTTTAAGTTGCTTATAATTAGTTTTTCTTTTTTATGTTTATTGATTTGTACTTAGGTGGAATAAAATGCTTGGATTGTCTTGTGATTTGTAAAGTAAAAGTTATATGTTTTGTTTTATTGAATTTGATTCTGAAATAGATTATATTTAGTGTTTCTTGTTATTCTGACCTTCTATTTAGTCTTTGTTTAATTTTTTCTACTTTAATATAACCGTCCATTCATACCTATTTGTTAGAATTTCTATTCCTCATTTTCAATTTCCTCCATATTGGTTAGCTTGTTCAATTATTTTATGCCATCCAATGATCCAACTTGGGAATTGAAGGTTTTTGCTCCTTGTGTCAAATTTCAAGTTAATCATGTTGGCTAAAATCATAATTTGTATCTGTAATTTTTTAGCAAACTAGGAAGACAATTGTCAAGCAAAGCATTAGTTCATACTGGAAGTTGCCAATGGACTGAGTCTTTATCTTCTGAAACTGGTTTAGATGTATGTTTATTAACTTCTGAAACCAATACCTGTAATCAAATTTTACAAAGTTCATTCTTTGGTTTAATTTGCTGTCAAATGTAATAGTTTTAGAACTAATATATGAAGGCTTGAGTTATTGATCATGAATTTTTTATGGGATTCCTTCCTTTAAAAAGTTTACTTTGTCATGTTTGTAGGTGAAAATCCAGTTCTTAGCTCCAATATTAAAAGTATAAGGTCTGTATGATGGGATGGTTTTGTTCTTTTTTGTAAATATTTGATTATATGTTTGTTTGGCCTTTAAAATTATTGAACCATTTCAGGAGTGGAGAATTTAAACATATACATTCTCCAAAACAACATGTTGGTGGGGATCCTCCTGTTTACAGTGCTGGCGTAAGTATCGATTCACGATTCGTATGAACATGTCTTGGATTGCTTTTAAGCCATGTGAGCATAGGCTAGAATCACATCCTCTAATTATAATAAAACACCATGAGATGATAGTTACATTATACTTAACCATGAATTTATTTTCATTTGTGTACACTTATCTACGTATTTTTCTCCCAAACTCTTTTTTCTTTTTATTATCTTTATTGATCCCGTGAACATCCAGTTGTTGGCATCTTTTAGCTAGTTACAATACATGACTCGTACATTTCCTCTTTGAGAATGCTTTTTAATCTTGTTTTTCTGGCTTCATAGTTGGTATGTAATTTGTATTGTTGTACTTTTCTTGTACCTAACATAATTTTTTGGATTTCTTTTAGATTTATTGTTACAAATAATGGATCGGGCCATGATGTTGCTGGCTTGAGGTGAAGATGTATTTAATTCATTCAACGAAAGGTGCTTATTAAGTAATTTTATAGTGTTATGAAGTACGAAGAACATGAAAAACGAGCTTGAAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTTGTATCAAGTAGTGATGACTTTAAGGTATTTGACTGAAGCACACACTATCTTGAGTTGGTGAAGATCGATTATTGATTTAAAAATAGATTTGTGATTGATGCTCATAAGTGAGGATTAACTAGCATTTCTTAATTTCTGCATTACAATTTTTTTCATCTTTTTCAATGGTTAGATTTGTAGCAGAGGATATTTGACTTGCCAACTATGGCACTTGGAAAATGATATCCTTTGTTGAGTTTTATTTGTAAATTAGGCAATTATAATTTTGGATCCATGTTGAAACTGTTACTACCACATGATTTGTAGAAATTATCCAGACAATTATGTATTACTCAAGTATGGGTCAAAGGGTTAATAGTTTGTCAGTTGTTGGTGGCTTTTTCTTAAACAAGTTCTTCTCCTACTTATTAACTTCAAGTTACAACATTAGGTTCTTTCCATTATGTTTTTTCTGATACTATTCTCAGGTACATTGCTCCTTTTCTTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGTTGA

mRNA sequence

ATGCAATTGGGACCTCACCGACTTTATCATCAGAATGTCTACAGGTGGAAATTAATGTCGGAGTTTAAAACGAAATGGGATTCCGTGGTTTTGTCTAACTCTACTGCAATAGTTGGTGTTTCAGCAAAAAAATTGGGGACTCTTCTGTATGTGATATTTGCTGAAATAGCATTCTGGGCAATGGTAGCTGAGATTTTTTATTTGATTACGAATGAGTATAAATTGTTACAAGCAATGGAGAACTGGACGTTGATTCAACCACCACCACTTGAAGATCAGAGCATACTTGGTTCAAGCACAATGAAACATGGACGGTTTTTTAGCAAACTAGGAAGACAATTGTCAAGCAAAGCATTAGTTCATACTGGAAGTTGCCAATGGACTGAGTCTTTATCTTCTGAAACTGGTGAAAATCCAGTTCTTAGCTCCAATATTAAAAGTATAAGATTTATTGTTACAAATAATGGATCGGGCCATGATGTTGCTGGCTTGAGTACGAAGAACATGAAAAACGAGCTTGAAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTTGTATCAAGTAGTGATGACTTTAAGGTACATTGCTCCTTTTCTTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGTTGA

Coding sequence (CDS)

ATGCAATTGGGACCTCACCGACTTTATCATCAGAATGTCTACAGGTGGAAATTAATGTCGGAGTTTAAAACGAAATGGGATTCCGTGGTTTTGTCTAACTCTACTGCAATAGTTGGTGTTTCAGCAAAAAAATTGGGGACTCTTCTGTATGTGATATTTGCTGAAATAGCATTCTGGGCAATGGTAGCTGAGATTTTTTATTTGATTACGAATGAGTATAAATTGTTACAAGCAATGGAGAACTGGACGTTGATTCAACCACCACCACTTGAAGATCAGAGCATACTTGGTTCAAGCACAATGAAACATGGACGGTTTTTTAGCAAACTAGGAAGACAATTGTCAAGCAAAGCATTAGTTCATACTGGAAGTTGCCAATGGACTGAGTCTTTATCTTCTGAAACTGGTGAAAATCCAGTTCTTAGCTCCAATATTAAAAGTATAAGATTTATTGTTACAAATAATGGATCGGGCCATGATGTTGCTGGCTTGAGTACGAAGAACATGAAAAACGAGCTTGAAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTTGTATCAAGTAGTGATGACTTTAAGGTACATTGCTCCTTTTCTTTTAATAGGTCAAAATTTGGTGCACAAGACATTAGAAAATTGTTGA

Protein sequence

MQLGPHRLYHQNVYRWKLMSEFKTKWDSVVLSNSTAIVGVSAKKLGTLLYVIFAEIAFWAMVAEIFYLITNEYKLLQAMENWTLIQPPPLEDQSILGSSTMKHGRFFSKLGRQLSSKALVHTGSCQWTESLSSETGENPVLSSNIKSIRFIVTNNGSGHDVAGLSTKNMKNELEVLIFHVLNLPCLYQVVMTLRYIAPFLLIGQNLVHKTLENC
Homology
[Close]
BLAST of MELO3C035004 vs. NCBI nr
Match: KAA0041016.1 (26S protease regulatory subunit 8 -like protein A [Cucumis melo var. makuwa] >TYK20375.1 26S protease regulatory subunit 8 -like protein A [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 9.4e-06
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 0 

Query: 165 STKNMKNELEVLIFHVLNLPCLYQVVMTLRYI 197
           STKNMKNEL VLIFHVLNLPCLYQVVMT+RY+
Sbjct: 63  STKNMKNELGVLIFHVLNLPCLYQVVMTIRYL 94

[Close]
BLAST of MELO3C035004 vs. ExPASy TrEMBL
Match: A0A5A7TG46 (26S protease regulatory subunit 8-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00790 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.6e-06
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 0 

Query: 165 STKNMKNELEVLIFHVLNLPCLYQVVMTLRYI 197
           STKNMKNEL VLIFHVLNLPCLYQVVMT+RY+
Sbjct: 63  STKNMKNELGVLIFHVLNLPCLYQVVMTIRYL 94

The following BLAST results are available for this feature:
BLAST of MELO3C035004 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C035004 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041016.19.4e-0690.6326S protease regulatory subunit 8 -like protein A [Cucumis melo var. makuwa] >TY... [more]
BLAST of MELO3C035004 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TG464.6e-0690.6326S protease regulatory subunit 8-like protein A OS=Cucumis melo var. makuwa OX=... [more]
BLAST of MELO3C035004 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035004.1MELO3C035004.1mRNA