MELO3C034995 (gene) Melon (DHL92) v4

Overview
NameMELO3C034995
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionproteasome-associated protein ECM29 homolog isoform X1
Locationchr11: 13659448 .. 13661783 (+)
RNA-Seq ExpressionMELO3C034995
SyntenyMELO3C034995
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAATGTCATTCTAAACTCATAGTTTTGGAGCTTTCTCAGGGTGGCAGGAGGGTTCTTGAGCAAACTTCTAGTGCTGCATCACCTAACACATGCTATAGATGTGGTGAACAAGGGCATTTTGCTCGGGGGTGTGCAGGTTCCACCAAGGTAGATAAAATAGCTTACATATTTTTTTGTTTTATTAGGAAAAAAGAAAATTTTCATTTTGTTATGAATTTATATCTCTTGTTGAAATGTTTTTTTTTGCTGTGAGAGGGAAAAGAAACCCTCTTGGATGCACTTGGTGCTATTTCAACTGCTTGCCACAAATTAATTTCTACTGTAGATCTTGCCATGCCCAATGCCATTGTAAATCTGGTATCTTCCTCTTGCTCCAAGAAAGCAAAGAAATTTCGAAGCAATAGATGCAAGGGGATAGACTTTAGTTTTGGTATACAACACATGTTTTTGGTTATATAACATAGCTATTATTGTTGATTTTGGAATAGGCCACACACAGGAACTTTTAGTTGGTTATATTTGGATTGGAATTCTGTAATTGTAGATGACATTGTTGAGAAGAATGAAATTATTGTTGGTTTACTGGTTTATTTGTCATTTTATTGTTGTGTAACTACTGGTTGGAAAGGAATGTACTTAATGCAGGACACAGAAAATAGAAAATTTGTATATTTAATATATTAATAAACAATATACATAACGTTAAATATATGACGAATTTTTTGTGTCAACTATACAATTTTACTTGACGTGCAAATAGTGTCAAGTATGCGAACTTACTTGAATCAAATATAATATTTTACTTGATGGTTTTTTAGTATCAAATATACAATTTTACTTGACATGTAAATAGTGTCAAGTATGCGATCTTGACGGTAGATTACTTGATGTCAATAAAATGTCAAGTAAAGGTATATTCGACGATTTATTAGTGTCAAGTAAGGGTATACTTGACGTGTTTTGAATGTCAAGTAAAGGTATACTTGACGGTTTTTCAGTGTCAAGTAATTTGACTATACTTGATAGTCGATTACTTGACGCTTTTAAAAACGTCAAGTAAAGGTTTACTTAACATTGTATTAACGTCAAGTAATCCAATTTCTGTAATAGTGATGTATAATATGAAACTCATACATTATAATGAAAATAAGAAAATGGAAAGTAAGAGATATAAGCCGAGTCGTAGAATGCCTAAGCATCCCTTGGCTCTTTAACAAGTTATGAGGAAGAAGATTGTGGTTTCTCTCTCTAATCTTATTCTGAGCTCTCACTTACAAGATTAACTAGAGAAGAGATGGAATATTCTTTACATAAGGCAGAAAAGTTAGTCCTTTCCACTGGCTTCGATCGAGCTCTCTAGGTCTTGGTCCATTCAGACCCTCTTTTCTTGGTAAAGATGGAGACTTTATATAGGCTACTTTAGGCAGAAAACTTATATTCCTCTGCACACGTCAATGCCAAACGCAGCATTGTCAAGTCACATCAACTCAACTACCATTTTTGTCTTCTAGTGAATCTCTTTGCGTGATGATGTGAAATCTTGCCTAGTGATGTTAATCGCCAAGCAATCTTCCAATCGCATAAGCTTTTGCATGCATCCTTCATTTTGCAATTCACTATATCTTTTTTCTTAATTATCCTGCAATAAAAACAATGAATGACATGGAAAATAAGGCATGAAGATTTATGTAAGTTATGTTCCCTTATCTTTATAAATTTACGATGAAAGCTACGTGTTTTCAGACTTTATCCTACGTTATGACTCCATTGTTCTACCTAAAAGGTTATAATATCATGTATTTCTACAAGCTATTAGTCCCTGGTAGGGACAAAGGAAAGGATGTCGAGAATACAAACCTCCAAGAAGAAAAAGGAGGGAATGAAACAACATGAACTCGCAACATTAGGTGAACAACTAGAGAAATTGTCAGCCAAATTTAAGGCTATAGAAGAGCAAGAGGTGGACCACCTCGAGGTCGTGGCAACAGAGCTTAAGGAAGAGCTAAATCAAATAAGCCCTTTTGGAACTAAGGTTATCACCTGAAAACCAGAGCTTAAGCGCTGCCACACCATAGAAAAGGAAGACAAAAGTTGGACCATCTAAATCTGAGGAGGCCTAACAAGGCGGTCGGGGGTTATTCCTCTATAATGAAGTTCTTCCTAACTTTATCTACAGACTAATTAAGGCATTTCGGTGGAGTAAGTTTTTCCTACAAGAAACAACAGTCAGATTGGATGTGGTAAACAAAGTTTACGCTGCAAAGTACTATCCAATTGACTTCTATGTGATGGTTGAAGGGCAAAGGATTTATTTCAATGTTAAGGCGTAA

mRNA sequence

ATGTCAAAATGTCATTCTAAACTCATAGTTTTGGAGCTTTCTCAGGGTGGCAGGAGGGTTCTTGAGCAAACTTCTAGTGCTGCATCACCTAACACATGCTATAGATGTGGTGAACAAGGGCATTTTGCTCGGGGGTGTGCAGGTTCCACCAAGGGAAAAGAAACCCTCTTGGATGCACTTGGTGCTATTTCAACTGCTTGCCACAAATTAATTTCTACTGTAGATCTTGCCATGCCCAATGCCATTGTAAATCTGGTATCTTCCTCTTGCTCCAAGAAAGCAAAGAAATTTCGAAGCAATAGATGCAAGGGGATAGACTTTAGTTTTGGTATACAACACATGCCACACACAGGAACTTTTAGTTGGTTATATTTGGATTGGAATTCTGTAATTGTAGATGACATTGTTGAGAAGAATGAAATTATTGTTGGTTTACTGTGTCAAGTATGCGATCTTGACGGTAGATTACTTGATGTCAATAAAATGTCAAGTAAAGGGACAAAGGAAAGGATGTCGAGAATACAAACCTCCAAGAAGAAAAAGGAGGGAATGAAACAACATGAACTCGCAACATTAGGTGAACAACTAGAGAAATTGTCAGCCAAATTTAAGGCTATAGAAGAGCAAGAGGTGGACCACCTCGAGGTCGTGGCAACAGAGCTTAAGGAAGAGCTAAATCAAATAAGCCCTTTTGGAACTAAGGCATTTCGGTGGAGTAAGTTTTTCCTACAAGAAACAACAGTCAGATTGGATGTGGTAAACAAAGTTTACGCTGCAAAGTACTATCCAATTGACTTCTATGTGATGGTTGAAGGGCAAAGGATTTATTTCAATGTTAAGGCGTAA

Coding sequence (CDS)

ATGTCAAAATGTCATTCTAAACTCATAGTTTTGGAGCTTTCTCAGGGTGGCAGGAGGGTTCTTGAGCAAACTTCTAGTGCTGCATCACCTAACACATGCTATAGATGTGGTGAACAAGGGCATTTTGCTCGGGGGTGTGCAGGTTCCACCAAGGGAAAAGAAACCCTCTTGGATGCACTTGGTGCTATTTCAACTGCTTGCCACAAATTAATTTCTACTGTAGATCTTGCCATGCCCAATGCCATTGTAAATCTGGTATCTTCCTCTTGCTCCAAGAAAGCAAAGAAATTTCGAAGCAATAGATGCAAGGGGATAGACTTTAGTTTTGGTATACAACACATGCCACACACAGGAACTTTTAGTTGGTTATATTTGGATTGGAATTCTGTAATTGTAGATGACATTGTTGAGAAGAATGAAATTATTGTTGGTTTACTGTGTCAAGTATGCGATCTTGACGGTAGATTACTTGATGTCAATAAAATGTCAAGTAAAGGGACAAAGGAAAGGATGTCGAGAATACAAACCTCCAAGAAGAAAAAGGAGGGAATGAAACAACATGAACTCGCAACATTAGGTGAACAACTAGAGAAATTGTCAGCCAAATTTAAGGCTATAGAAGAGCAAGAGGTGGACCACCTCGAGGTCGTGGCAACAGAGCTTAAGGAAGAGCTAAATCAAATAAGCCCTTTTGGAACTAAGGCATTTCGGTGGAGTAAGTTTTTCCTACAAGAAACAACAGTCAGATTGGATGTGGTAAACAAAGTTTACGCTGCAAAGTACTATCCAATTGACTTCTATGTGATGGTTGAAGGGCAAAGGATTTATTTCAATGTTAAGGCGTAA

Protein sequence

MSKCHSKLIVLELSQGGRRVLEQTSSAASPNTCYRCGEQGHFARGCAGSTKGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFRSNRCKGIDFSFGIQHMPHTGTFSWLYLDWNSVIVDDIVEKNEIIVGLLCQVCDLDGRLLDVNKMSSKGTKERMSRIQTSKKKKEGMKQHELATLGEQLEKLSAKFKAIEEQEVDHLEVVATELKEELNQISPFGTKAFRWSKFFLQETTVRLDVVNKVYAAKYYPIDFYVMVEGQRIYFNVKA
Homology
[Close]
BLAST of MELO3C034995 vs. NCBI nr
Match: TYK11974.1 (hypothetical protein E5676_scaffold177G001590 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 6.5e-23
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 171 MSRIQTSKKKKEGMKQHELATLGEQLEKLSAKFKAIEEQEVDHLEVVATELKEELNQISP 230
           MSRIQTSKKKKEGMKQHELATLGEQLEKLSAKFKAIEEQEVDHLEVVATELKEELNQISP
Sbjct: 1   MSRIQTSKKKKEGMKQHELATLGEQLEKLSAKFKAIEEQEVDHLEVVATELKEELNQISP 60

Query: 231 FGTK 235
           FGTK
Sbjct: 61  FGTK 64

[Close]
BLAST of MELO3C034995 vs. NCBI nr
Match: XP_008449627.1 (PREDICTED: proteasome-associated protein ECM29 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-13
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFR 99
            +GKET+LDALGAISTACHKLIST D AMPNAIVNLVSSSCSKKAKKFR
Sbjct: 1539 EGKETILDALGAISTACHKLISTADPAMPNAIVNLVSSSCSKKAKKFR 1586

[Close]
BLAST of MELO3C034995 vs. NCBI nr
Match: TYJ96095.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-13
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFR 99
            +GKET+LDALGAISTACHKLIST D AMPNAIVNLVSSSCSKKAKKFR
Sbjct: 1683 EGKETILDALGAISTACHKLISTADPAMPNAIVNLVSSSCSKKAKKFR 1730

[Close]
BLAST of MELO3C034995 vs. NCBI nr
Match: XP_008449628.1 (PREDICTED: proteasome-associated protein ECM29 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-13
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFR 99
            +GKET+LDALGAISTACHKLIST D AMPNAIVNLVSSSCSKKAKKFR
Sbjct: 1523 QGKETILDALGAISTACHKLISTADPAMPNAIVNLVSSSCSKKAKKFR 1570

[Close]
BLAST of MELO3C034995 vs. NCBI nr
Match: XP_011657602.1 (proteasome adapter and scaffold protein ECM29 isoform X1 [Cucumis sativus] >XP_031743091.1 proteasome adapter and scaffold protein ECM29 isoform X1 [Cucumis sativus] >KGN48359.2 hypothetical protein Csa_004256 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 4.7e-13
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFR 99
            +GKET+LDALGAISTACHKLIST D A+PNAIVNLVSSSCSKKAKKFR
Sbjct: 1545 EGKETILDALGAISTACHKLISTADPALPNAIVNLVSSSCSKKAKKFR 1592

[Close]
BLAST of MELO3C034995 vs. ExPASy TrEMBL
Match: A0A5D3CLC9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001590 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-23
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 171 MSRIQTSKKKKEGMKQHELATLGEQLEKLSAKFKAIEEQEVDHLEVVATELKEELNQISP 230
           MSRIQTSKKKKEGMKQHELATLGEQLEKLSAKFKAIEEQEVDHLEVVATELKEELNQISP
Sbjct: 1   MSRIQTSKKKKEGMKQHELATLGEQLEKLSAKFKAIEEQEVDHLEVVATELKEELNQISP 60

Query: 231 FGTK 235
           FGTK
Sbjct: 61  FGTK 64

[Close]
BLAST of MELO3C034995 vs. ExPASy TrEMBL
Match: A0A5D3BCA4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00550 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-13
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFR 99
            +GKET+LDALGAISTACHKLIST D AMPNAIVNLVSSSCSKKAKKFR
Sbjct: 1683 EGKETILDALGAISTACHKLISTADPAMPNAIVNLVSSSCSKKAKKFR 1730

[Close]
BLAST of MELO3C034995 vs. ExPASy TrEMBL
Match: A0A1S3BMF7 (proteasome-associated protein ECM29 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491455 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-13
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFR 99
            +GKET+LDALGAISTACHKLIST D AMPNAIVNLVSSSCSKKAKKFR
Sbjct: 1539 EGKETILDALGAISTACHKLISTADPAMPNAIVNLVSSSCSKKAKKFR 1586

[Close]
BLAST of MELO3C034995 vs. ExPASy TrEMBL
Match: A0A1S3BN41 (proteasome-associated protein ECM29 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491455 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-13
Identity = 44/48 (91.67%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFR 99
            +GKET+LDALGAISTACHKLIST D AMPNAIVNLVSSSCSKKAKKFR
Sbjct: 1523 QGKETILDALGAISTACHKLISTADPAMPNAIVNLVSSSCSKKAKKFR 1570

[Close]
BLAST of MELO3C034995 vs. ExPASy TrEMBL
Match: A0A0A0KI82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429070 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-13
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFR 99
            +GKET+LDALGAISTACHKLIST D A+PNAIVNLVSSSCSKKAKKFR
Sbjct: 1542 EGKETILDALGAISTACHKLISTADPALPNAIVNLVSSSCSKKAKKFR 1589

[Close]
BLAST of MELO3C034995 vs. TAIR 10
Match: AT2G26780.1 (ARM repeat superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0 

Query: 51   KGKETLLDALGAISTACHKLISTVDLAMPNAIVNLVSSSCSKKAKKFRSN 101
            +GK+ LLDALGA+S ACH+ I+  D   P  I++L+ S+C KK KK+R +
Sbjct: 1554 EGKDALLDALGALSVACHEAITKEDPTTPTTILSLICSACKKKLKKYRES 1603

The following BLAST results are available for this feature:
BLAST of MELO3C034995 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C034995 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK11974.16.5e-23100.00hypothetical protein E5676_scaffold177G001590 [Cucumis melo var. makuwa][more]
XP_008449627.12.1e-1391.67PREDICTED: proteasome-associated protein ECM29 homolog isoform X1 [Cucumis melo][more]
TYJ96095.12.1e-1391.67Beta-galactosidase [Cucumis melo var. makuwa][more]
XP_008449628.12.1e-1391.67PREDICTED: proteasome-associated protein ECM29 homolog isoform X2 [Cucumis melo][more]
XP_011657602.14.7e-1389.58proteasome adapter and scaffold protein ECM29 isoform X1 [Cucumis sativus] >XP_0... [more]
BLAST of MELO3C034995 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CLC93.2e-23100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BCA41.0e-1391.67Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G0... [more]
A0A1S3BMF71.0e-1391.67proteasome-associated protein ECM29 homolog isoform X1 OS=Cucumis melo OX=3656 G... [more]
A0A1S3BN411.0e-1391.67proteasome-associated protein ECM29 homolog isoform X2 OS=Cucumis melo OX=3656 G... [more]
A0A0A0KI822.3e-1389.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429070 PE=4 SV=1[more]
BLAST of MELO3C034995 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G26780.16.3e-0850.00ARM repeat superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..224
NoneNo IPR availableGENE3D4.10.60.10coord: 12..56
e-value: 1.2E-6
score: 30.3
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 32..48
e-value: 0.0075
score: 24.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 31..46
e-value: 2.5E-4
score: 21.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 33..46
score: 10.394444
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 12..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034995.1MELO3C034995.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding