MELO3C034963 (gene) Melon (DHL92) v4

Overview
NameMELO3C034963
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr11: 11283175 .. 11285642 (-)
RNA-Seq ExpressionMELO3C034963
SyntenyMELO3C034963
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCTAACGTTGGAGCTACTAAAGGACGACAATAAGCATCTCCCACAGACACCGTACAATACTAGGCATAGAATTAGGCAGCTTCCGAACTTTCGCATGATACACAAGTCTGATCTTGTGTGTCGACAAAACACGTGCATGGACAGATGAACATTTGCAATTCTATGCCATTTACTTAGGACTGTAGTTGGTCTGTCATCGACAAAGATTGTCGATGTTGAGGAAATGGTTGCGATGTTCTTGCACGTCCTTGCCCATGATGTGAAGAACCGCATAATTCAACGAGAATTTGTACGGTTAAGTGAGACAGTATCTCGACATTTTAACCACATCTTGTTGGCTGTACTATGACTCCATGATGAGTTGATAAAGAAACATGTGCCGGTAACAAACAACTGCAACGATCAATGTTGGAAGTTTTTCAAGGTGGGTATAGTACAAGTGGTTTGTATGTGACGTATCAGTAGGTGCCAATAATGTAAGCGTATTTATTTAAACCTATAGAATTGCCTTGGGCCGTTAGACCGGTCGTACATAAAGGTCAACGTGTCCGCAGCAAATCGACCTACATTTAGAACGCGTGAGGGAAAATTGCCACAAATGTACTGGGTGTTTGTGACACGAAAGGGGATTTCATATACATCCTCGTCGGATAGGAAGGATTTGCAACAGACTCGCGGATTCTATGAGATGTTCTTGCATAAAAAAACGAACTCCAAGGGCCAAAGGGTATTTACAAATTTTCATTAAACCATGTCGTTTTGTACTTACATATTCTAAGCGCATAAAGCATTGATTTTCCTAAGGGTTATCCAACGCTAAGGGATTTCTCGTCCCATACATAGGCCAGCGGTACCACATGCAAGAGTGGTGTGGTGTTGGAAATGCCCAACCAATGCAAAGGAGTACTTTAACATAAAGCACTCTTCGGCAAGGAATGTGATTGAGCGAGCCTTCGGTGTTATGAAGGGTCATTGGGCAATACTTCGTGGAAAGTCGTACTATCTGCTCCAAGTCTAGTGTCGCACATCCTAGCATGTTGCTTGCTGCACAATTTGACAAACAGAGAAATGACAAATTGCGACGACAATGACGATATGGATGAGGGGGACTTCACGTAGCCACGACCACCGCTTGAGAAGAACATTTAGTACATTGAGACCACAAACAAGTGGTCTCAGTGACACGACGAATTAGCTGAAGCGATGTTCACAGAATGGCAGTTGCGTAACGCTTAGTTAAAACGATTTTAAATTACAACCCATCAGTTGTATGACAATTTAAATTACCTATACTCTGTATTTATTCATATTTAATGTATAAGTGCATGTTGTACATAAATTATATGTCATAATATTGTTTCGCAGTCGTTTCTGTCTCGTAAATGTGAAATTGTGAAATTACTAACCCGTTCCATGCATTTTTTTATCATTTGCCATTCTCAGTATGACAACCTCGTCCCGTGCGCCAAAGCATGTATGAATCAAGAAGGAGGAGGGCACTCTTGTAGAGTGTTTAGTAGAGTTGGTGTCGACTAGGAGATGTAAATCTGACAATGGCACGTTTCGGCTAGGTTACCTGACTTAACTAGTACGCATGATGGCCCAAAAAATACCTAGATGTCGTGTCCGCGCAACCACTGTAATCGATTGCAGAATAAAGACACATAAGCGGTCATTCCAGGTCATCACAGAAATGGGGGGGCTCGCGTTCAATGGGTTCAGCTAGAATGATGATGCAAAATGCATAATTGCGGAGAAGGAGGTATTCGATAACTGGGTTAGGGTAAGGAAAATAATATGAACATCATACTACTTGCGCAGTGTACATTTACTTAACAATTTTCCTATTGGTACTTTTAAGTGGTCCTCTTTTTTATGCAGTTGCATCTTGCAGTAAAGGGGCTCCTTAACAAATCATTTTCCTATTACAACGAACTTGCATATATGTTTGGACACGATAGGACAATGAGTCACTTCGCTGAGACATTCGCTTACATCGGGGTTTAACGAGCCTACCTGGTATGTAGGTTTTGACATGCCGGATGGAAACGAGGAGTTCACGAGGAGTTTTCATCCATGTACAGCCAGGAGATTGACATATCCTAGGAGGATGTACGCGCATCACGATCTTCTCGCTGGTCGGAGGGTAGGGTCGGATTGAACGGATCGAAGAGAAAAAGGGGAAGCTAGTGAGAGGGCGAGATTGAAGTCATACATATGGTGCTCAAGTCTACGAATGACCTAGGACGAGAGTAGCCTACACGCACCCTTGCCAATGACAACCATGTGCACTGGGAATTCTTATGCTTATTGCGTGAGATGCCGGAACTAACCAGTTTGGATAGGGAGTTGTTGCAAAGGCATCTGTTGTCTTGTATGGACGACATGCGGGGTTTCGTACAGATGCCTGATGATGAGAGGCAGACCTTTTGGAGAGTCCTCCTAAGAGACATCTCCAGATAG

mRNA sequence

ATGCTCCTAACGTTGGAGCTACTAAAGGACGACAATAAGCATCTCCCACAGACACCGTACAATACTAGGCATAGAATTAGGCAGCTTCCGAACTTTCGCATGATACACAAGTCTGATCTTGTGTGTCGACAAAACACGACTGTAGTTGGTCTGTCATCGACAAAGATTGTCGATGTTGAGGAAATGGTTGCGATGTTCTTGCACGTCCTTGCCCATGATGTGAAGAACCGCATAATTCAACGAGAATTTGTACGGTTAAGTGAGACAAATTGCCTTGGGCCGTTAGACCGGTCGTACATAAAGGTCAACGTGTCCGCAGCAAATCGACCTACATTTAGAACGCGTGAGGGAAAATTGCCACAAATGTACTGGGTGTTTGTGACACGAAAGGGGATTTCATATACATCCTCGTCGGATAGGAAGGATTTGCAACAGACTCGCGGATTCTATGAGATGTTCTTGCATAAAAAAACGAACTCCAAGGGCCAAAGGTATGACAACCTCGTCCCGTGCGCCAAAGCATGTATGAATCAAGAAGGAGGAGGGCACTCTTGTAGATTGCATCTTGCAGTAAAGGGGCTCCTTAACAAATCATTTTCCTATTACAACGAACTTGCATATATGTTTGGACACGATAGGACAATGAGTCACTTCGCTGAGACATTCGCTTACATCGGGATGCCGGAACTAACCAGTTTGGATAGGGAGTTGTTGCAAAGGCATCTGTTGTCTTGTATGGACGACATGCGGGGTTTCGTACAGATGCCTGATGATGAGAGGCAGACCTTTTGGAGAGTCCTCCTAAGAGACATCTCCAGATAG

Coding sequence (CDS)

ATGCTCCTAACGTTGGAGCTACTAAAGGACGACAATAAGCATCTCCCACAGACACCGTACAATACTAGGCATAGAATTAGGCAGCTTCCGAACTTTCGCATGATACACAAGTCTGATCTTGTGTGTCGACAAAACACGACTGTAGTTGGTCTGTCATCGACAAAGATTGTCGATGTTGAGGAAATGGTTGCGATGTTCTTGCACGTCCTTGCCCATGATGTGAAGAACCGCATAATTCAACGAGAATTTGTACGGTTAAGTGAGACAAATTGCCTTGGGCCGTTAGACCGGTCGTACATAAAGGTCAACGTGTCCGCAGCAAATCGACCTACATTTAGAACGCGTGAGGGAAAATTGCCACAAATGTACTGGGTGTTTGTGACACGAAAGGGGATTTCATATACATCCTCGTCGGATAGGAAGGATTTGCAACAGACTCGCGGATTCTATGAGATGTTCTTGCATAAAAAAACGAACTCCAAGGGCCAAAGGTATGACAACCTCGTCCCGTGCGCCAAAGCATGTATGAATCAAGAAGGAGGAGGGCACTCTTGTAGATTGCATCTTGCAGTAAAGGGGCTCCTTAACAAATCATTTTCCTATTACAACGAACTTGCATATATGTTTGGACACGATAGGACAATGAGTCACTTCGCTGAGACATTCGCTTACATCGGGATGCCGGAACTAACCAGTTTGGATAGGGAGTTGTTGCAAAGGCATCTGTTGTCTTGTATGGACGACATGCGGGGTTTCGTACAGATGCCTGATGATGAGAGGCAGACCTTTTGGAGAGTCCTCCTAAGAGACATCTCCAGATAG

Protein sequence

MLLTLELLKDDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNTTVVGLSSTKIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSETNCLGPLDRSYIKVNVSAANRPTFRTREGKLPQMYWVFVTRKGISYTSSSDRKDLQQTRGFYEMFLHKKTNSKGQRYDNLVPCAKACMNQEGGGHSCRLHLAVKGLLNKSFSYYNELAYMFGHDRTMSHFAETFAYIGMPELTSLDRELLQRHLLSCMDDMRGFVQMPDDERQTFWRVLLRDISR
Homology
[Close]
BLAST of MELO3C034963 vs. NCBI nr
Match: KAA0045638.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-46
Identity = 161/490 (32.86%), Postives = 194/490 (39.59%), Query Frame = 0 

Query: 10  DDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT---------------TVVGLSST 69
           ++NK LP TP +TRHRIR+L  FRMIH+SDLVCRQ+T                VVGLSST
Sbjct: 2   NNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLINVVGLSST 61

Query: 70  KIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSETNCLGPLDRSYIKVNVSAANRPTFRT 129
           +IVDVEEMVAMFLHVLAHDVKN +IQREF      NCLG LD +YIKVNV A +RPTFRT
Sbjct: 62  EIVDVEEMVAMFLHVLAHDVKNCVIQREF------NCLGALDGTYIKVNVPAGDRPTFRT 121

Query: 130 REGKLP------------------------------QMYWV----FVTRKGISYTSSSDR 189
           R+G++                               + Y++    +   +G        R
Sbjct: 122 RKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRYYYLCDAGYPNAEGFLVQDRGQR 181

Query: 190 KDLQQTRGFYEMFLHKKT--NSKGQRYDNLVPCAKACMNQ-------------------- 249
             LQ+ RG      + K   N+K     N++ CA   +                      
Sbjct: 182 YHLQEWRGAANAPTNAKEYFNTKHSSTRNVIECAFGVLKDNDTFRPGYLAQLVRMMAEKL 241

Query: 250 --------------------------EGGGHSC-----------------------RLHL 274
                                     E  G +C                       R H 
Sbjct: 242 PGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDNWVRSHP 301

[Close]
BLAST of MELO3C034963 vs. NCBI nr
Match: TYK27240.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 189.9 bits (481), Expect = 2.9e-44
Identity = 158/443 (35.67%), Postives = 194/443 (43.79%), Query Frame = 0 

Query: 1   MLLTLELLKDDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT-------------- 60
           MLLTLELL ++NK LP TP +TRH+IR+L  FRMIH+SDLVCRQ+T              
Sbjct: 20  MLLTLELLMNNNKRLPHTPSDTRHKIRELAYFRMIHESDLVCRQSTQMDRRTFAILCHLL 79

Query: 61  -TVVGLSSTKIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSE---------TNCLGPLD 120
             V GLSSTKIVD+EEMVAMFLHVLA+D    +I+R  +  +           NCLG L+
Sbjct: 80  RIVAGLSSTKIVDIEEMVAMFLHVLAYD---ELIKRPVLVTNNYNDQRWKCFENCLGALN 139

Query: 121 RSYIKVNVSAANRPTFRTREGKLPQMYWVFVTRKGISYTSSSDRKDLQQTRGFYEM-FLH 180
            +YIKVNV   +RPTFRTR+GK PQ +W   TRK IS+ SS   KD QQTRGFY M F  
Sbjct: 140 ETYIKVNVPTGDRPTFRTRKGKFPQTFWGCATRKEISFMSSPVGKDPQQTRGFYVMPFTR 199

Query: 181 KKTNS-------------------KGQRYD--------------------------NLVP 240
           K T                     +GQRY                           N++ 
Sbjct: 200 KWTTRYYYLCDAGYQNAEGFLVPYRGQRYHLQEWRGAANVPTNPNEYFNMKYSSARNVIQ 259

Query: 241 CA-----------------------------------------KACMNQEGGGHSCRLHL 274
            A                                         K+ + +EG    C + L
Sbjct: 260 RAFGVLKGCWDILRGKSYYPLQVQCRDSTYATTTTSEDIHYIEKSSIEEEGTLVECLMEL 319

[Close]
BLAST of MELO3C034963 vs. NCBI nr
Match: TYK02619.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 189.9 bits (481), Expect = 2.9e-44
Identity = 158/490 (32.24%), Postives = 192/490 (39.18%), Query Frame = 0 

Query: 10  DDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT---------------TVVGLSST 69
           ++NK LP TP +TRHRIR+L  F MIH+SDLVC+Q+T                V GLSST
Sbjct: 2   NNNKRLPHTPSDTRHRIRELAYFCMIHESDLVCQQSTRMDRRTFAILCHLLRNVAGLSST 61

Query: 70  KIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSETNCLGPLDRSYIKVNVSAANRPTFRT 129
           +IVDVEEMVAMFLHVLAHDVKN +IQREF      NCLG LD +YIKVNV A +RPTFRT
Sbjct: 62  EIVDVEEMVAMFLHVLAHDVKNCVIQREF------NCLGALDGTYIKVNVPAGDRPTFRT 121

Query: 130 REGKLP------------------------------QMYWV----FVTRKGISYTSSSDR 189
           R+G++                               + Y++    +   +G        R
Sbjct: 122 RKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRYYYLCDAGYPNAEGFLVQDRGQR 181

Query: 190 KDLQQTRGFYEMFLHKKT--NSKGQRYDNLVPCAKACMNQ-------------------- 249
             LQ+ RG      + K   N+K     N++ CA   +                      
Sbjct: 182 YHLQEWRGAANAPTNAKEYFNTKHSSTRNVIECAFGVLKDNDTFRPGYLAQLVRMMAEKL 241

Query: 250 --------------------------EGGGHSC-----------------------RLHL 274
                                     E  G +C                       R H 
Sbjct: 242 PGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDNWVRSHP 301

[Close]
BLAST of MELO3C034963 vs. NCBI nr
Match: TYK05796.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 169.9 bits (429), Expect = 3.1e-38
Identity = 118/329 (35.87%), Postives = 139/329 (42.25%), Query Frame = 0 

Query: 10  DDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT---------------TVVGLSST 69
           +DN+ +  TP +T  RIRQL  FRMIH+SDLVCRQ+T               TV GLSST
Sbjct: 2   NDNRRITYTPSDTLRRIRQLAYFRMIHESDLVCRQSTRMDRRTFAILCHLLQTVSGLSST 61

Query: 70  KIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSET------------------------- 129
           +IVDVEEMVAMFLHVLAHD+KN +IQREFVR  ET                         
Sbjct: 62  EIVDVEEMVAMFLHVLAHDMKNSVIQREFVRSDETVSRHFNLVLLTVVRLYEELIKRPVP 121

Query: 130 --------------NCLGPLDRSYIKVNVSAANRPTFRTREGKLPQMYWVFVTRKGISYT 189
                         NCLG LD +YIKVNV A +RPTFRTR+G++                
Sbjct: 122 VTNNCKDQRWQCFENCLGALDGTYIKVNVPATDRPTFRTRKGEI---------------- 181

Query: 190 SSSDRKDLQQTRGFYEMFLHKKTNSKGQRYDNLVPCAKACMNQEGGGHSC---------- 236
                                        Y NL P  + C+++ GGGHSC          
Sbjct: 182 --------------------------ATNYVNLKPYPETCLDEGGGGHSCGVFNEVGVNG 241

[Close]
BLAST of MELO3C034963 vs. NCBI nr
Match: KAA0053666.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK00835.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 169.1 bits (427), Expect = 5.3e-38
Identity = 125/367 (34.06%), Postives = 149/367 (40.60%), Query Frame = 0 

Query: 10  DDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT---------------TVVGLSST 69
           ++NK LP TP +TRHRIR+   F MIH+SDLVCRQ+T                V GLSST
Sbjct: 2   NNNKRLPHTPPDTRHRIREFAYFCMIHESDLVCRQSTQMNRRTFAILCHLPRNVAGLSST 61

Query: 70  KIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSETNCLGPLDRSYIKVNVSAANRPTFRT 129
           +I+DV+EMVAMFLHVLAHDV   + +        TNCLG LD +YIKVNV          
Sbjct: 62  EIIDVDEMVAMFLHVLAHDVNKDVQEPHHPTGICTNCLGALDGTYIKVNVPQEIGLHSER 121

Query: 130 REGKLPQMYWVFVTRKGISYTSSSDRKDLQQTRGFYEMFLHKKTNSKGQR---------- 189
            +GKLPQ +W  VTRKGIS+ SS   K+ QQTRG Y M  HKK + K QR          
Sbjct: 122 VKGKLPQTFWGSVTRKGISFMSSPVGKNPQQTRGSYVMRFHKKMDYKCQRDIIICACGIS 181

Query: 190 -------------------------------YDNLVPCAKACMNQEGGGHSC-------- 230
                                          Y NL  C + C+++  GG SC        
Sbjct: 182 KRGGVSRPVQRPAVPFARVKWCCKCANKCKGYVNLKSCPETCLDEGEGGDSCGMFNGASV 241

[Close]
BLAST of MELO3C034963 vs. ExPASy TrEMBL
Match: A0A5A7TS15 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001490 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.6e-46
Identity = 161/490 (32.86%), Postives = 194/490 (39.59%), Query Frame = 0 

Query: 10  DDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT---------------TVVGLSST 69
           ++NK LP TP +TRHRIR+L  FRMIH+SDLVCRQ+T                VVGLSST
Sbjct: 2   NNNKRLPHTPPDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLINVVGLSST 61

Query: 70  KIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSETNCLGPLDRSYIKVNVSAANRPTFRT 129
           +IVDVEEMVAMFLHVLAHDVKN +IQREF      NCLG LD +YIKVNV A +RPTFRT
Sbjct: 62  EIVDVEEMVAMFLHVLAHDVKNCVIQREF------NCLGALDGTYIKVNVPAGDRPTFRT 121

Query: 130 REGKLP------------------------------QMYWV----FVTRKGISYTSSSDR 189
           R+G++                               + Y++    +   +G        R
Sbjct: 122 RKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRYYYLCDAGYPNAEGFLVQDRGQR 181

Query: 190 KDLQQTRGFYEMFLHKKT--NSKGQRYDNLVPCAKACMNQ-------------------- 249
             LQ+ RG      + K   N+K     N++ CA   +                      
Sbjct: 182 YHLQEWRGAANAPTNAKEYFNTKHSSTRNVIECAFGVLKDNDTFRPGYLAQLVRMMAEKL 241

Query: 250 --------------------------EGGGHSC-----------------------RLHL 274
                                     E  G +C                       R H 
Sbjct: 242 PGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDNWVRSHP 301

[Close]
BLAST of MELO3C034963 vs. ExPASy TrEMBL
Match: A0A5D3BWV2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00270 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 158/490 (32.24%), Postives = 192/490 (39.18%), Query Frame = 0 

Query: 10  DDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT---------------TVVGLSST 69
           ++NK LP TP +TRHRIR+L  F MIH+SDLVC+Q+T                V GLSST
Sbjct: 2   NNNKRLPHTPSDTRHRIRELAYFCMIHESDLVCQQSTRMDRRTFAILCHLLRNVAGLSST 61

Query: 70  KIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSETNCLGPLDRSYIKVNVSAANRPTFRT 129
           +IVDVEEMVAMFLHVLAHDVKN +IQREF      NCLG LD +YIKVNV A +RPTFRT
Sbjct: 62  EIVDVEEMVAMFLHVLAHDVKNCVIQREF------NCLGALDGTYIKVNVPAGDRPTFRT 121

Query: 130 REGKLP------------------------------QMYWV----FVTRKGISYTSSSDR 189
           R+G++                               + Y++    +   +G        R
Sbjct: 122 RKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRYYYLCDAGYPNAEGFLVQDRGQR 181

Query: 190 KDLQQTRGFYEMFLHKKT--NSKGQRYDNLVPCAKACMNQ-------------------- 249
             LQ+ RG      + K   N+K     N++ CA   +                      
Sbjct: 182 YHLQEWRGAANAPTNAKEYFNTKHSSTRNVIECAFGVLKDNDTFRPGYLAQLVRMMAEKL 241

Query: 250 --------------------------EGGGHSC-----------------------RLHL 274
                                     E  G +C                       R H 
Sbjct: 242 PGCQVRATTVIDCRIKTLKRTFQAIAEMQGPACSGSGWNDEEKCIIGKKELFDNWVRSHP 301

[Close]
BLAST of MELO3C034963 vs. ExPASy TrEMBL
Match: A0A5D3DVC8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001280 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 158/443 (35.67%), Postives = 194/443 (43.79%), Query Frame = 0 

Query: 1   MLLTLELLKDDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT-------------- 60
           MLLTLELL ++NK LP TP +TRH+IR+L  FRMIH+SDLVCRQ+T              
Sbjct: 20  MLLTLELLMNNNKRLPHTPSDTRHKIRELAYFRMIHESDLVCRQSTQMDRRTFAILCHLL 79

Query: 61  -TVVGLSSTKIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSE---------TNCLGPLD 120
             V GLSSTKIVD+EEMVAMFLHVLA+D    +I+R  +  +           NCLG L+
Sbjct: 80  RIVAGLSSTKIVDIEEMVAMFLHVLAYD---ELIKRPVLVTNNYNDQRWKCFENCLGALN 139

Query: 121 RSYIKVNVSAANRPTFRTREGKLPQMYWVFVTRKGISYTSSSDRKDLQQTRGFYEM-FLH 180
            +YIKVNV   +RPTFRTR+GK PQ +W   TRK IS+ SS   KD QQTRGFY M F  
Sbjct: 140 ETYIKVNVPTGDRPTFRTRKGKFPQTFWGCATRKEISFMSSPVGKDPQQTRGFYVMPFTR 199

Query: 181 KKTNS-------------------KGQRYD--------------------------NLVP 240
           K T                     +GQRY                           N++ 
Sbjct: 200 KWTTRYYYLCDAGYQNAEGFLVPYRGQRYHLQEWRGAANVPTNPNEYFNMKYSSARNVIQ 259

Query: 241 CA-----------------------------------------KACMNQEGGGHSCRLHL 274
            A                                         K+ + +EG    C + L
Sbjct: 260 RAFGVLKGCWDILRGKSYYPLQVQCRDSTYATTTTSEDIHYIEKSSIEEEGTLVECLMEL 319

[Close]
BLAST of MELO3C034963 vs. ExPASy TrEMBL
Match: A0A5D3C620 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003010 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38
Identity = 118/329 (35.87%), Postives = 139/329 (42.25%), Query Frame = 0 

Query: 10  DDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT---------------TVVGLSST 69
           +DN+ +  TP +T  RIRQL  FRMIH+SDLVCRQ+T               TV GLSST
Sbjct: 2   NDNRRITYTPSDTLRRIRQLAYFRMIHESDLVCRQSTRMDRRTFAILCHLLQTVSGLSST 61

Query: 70  KIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSET------------------------- 129
           +IVDVEEMVAMFLHVLAHD+KN +IQREFVR  ET                         
Sbjct: 62  EIVDVEEMVAMFLHVLAHDMKNSVIQREFVRSDETVSRHFNLVLLTVVRLYEELIKRPVP 121

Query: 130 --------------NCLGPLDRSYIKVNVSAANRPTFRTREGKLPQMYWVFVTRKGISYT 189
                         NCLG LD +YIKVNV A +RPTFRTR+G++                
Sbjct: 122 VTNNCKDQRWQCFENCLGALDGTYIKVNVPATDRPTFRTRKGEI---------------- 181

Query: 190 SSSDRKDLQQTRGFYEMFLHKKTNSKGQRYDNLVPCAKACMNQEGGGHSC---------- 236
                                        Y NL P  + C+++ GGGHSC          
Sbjct: 182 --------------------------ATNYVNLKPYPETCLDEGGGGHSCGVFNEVGVNG 241

[Close]
BLAST of MELO3C034963 vs. ExPASy TrEMBL
Match: A0A5A7UHF7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00380 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.6e-38
Identity = 125/367 (34.06%), Postives = 149/367 (40.60%), Query Frame = 0 

Query: 10  DDNKHLPQTPYNTRHRIRQLPNFRMIHKSDLVCRQNT---------------TVVGLSST 69
           ++NK LP TP +TRHRIR+   F MIH+SDLVCRQ+T                V GLSST
Sbjct: 2   NNNKRLPHTPPDTRHRIREFAYFCMIHESDLVCRQSTQMNRRTFAILCHLPRNVAGLSST 61

Query: 70  KIVDVEEMVAMFLHVLAHDVKNRIIQREFVRLSETNCLGPLDRSYIKVNVSAANRPTFRT 129
           +I+DV+EMVAMFLHVLAHDV   + +        TNCLG LD +YIKVNV          
Sbjct: 62  EIIDVDEMVAMFLHVLAHDVNKDVQEPHHPTGICTNCLGALDGTYIKVNVPQEIGLHSER 121

Query: 130 REGKLPQMYWVFVTRKGISYTSSSDRKDLQQTRGFYEMFLHKKTNSKGQR---------- 189
            +GKLPQ +W  VTRKGIS+ SS   K+ QQTRG Y M  HKK + K QR          
Sbjct: 122 VKGKLPQTFWGSVTRKGISFMSSPVGKNPQQTRGSYVMRFHKKMDYKCQRDIIICACGIS 181

Query: 190 -------------------------------YDNLVPCAKACMNQEGGGHSC-------- 230
                                          Y NL  C + C+++  GG SC        
Sbjct: 182 KRGGVSRPVQRPAVPFARVKWCCKCANKCKGYVNLKSCPETCLDEGEGGDSCGMFNGASV 241

The following BLAST results are available for this feature:
BLAST of MELO3C034963 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045638.15.3e-4632.86retrotransposon protein [Cucumis melo var. makuwa][more]
TYK27240.12.9e-4435.67retrotransposon protein [Cucumis melo var. makuwa][more]
TYK02619.12.9e-4432.24retrotransposon protein [Cucumis melo var. makuwa][more]
TYK05796.13.1e-3835.87retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0053666.15.3e-3834.06retrotransposon protein [Cucumis melo var. makuwa] >TYK00835.1 retrotransposon p... [more]
BLAST of MELO3C034963 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034963 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TS152.6e-4632.86Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BWV21.4e-4432.24Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DVC81.4e-4435.67Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C6201.5e-3835.87Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UHF72.6e-3834.06Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C034963 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034963.1MELO3C034963.1mRNA