MELO3C034943 (gene) Melon (DHL92) v4

Overview
NameMELO3C034943
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr11: 10623541 .. 10623780 (+)
RNA-Seq ExpressionMELO3C034943
SyntenyMELO3C034943
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGACTTGTGCCATAACCTATAAATCTAATGGTCATTCAAATAGAGAAGTCGTCATACTTCTAATTAATAGATTTAGTGGAAGTCTCAAACTGTGGTGGGATCATGCCCTAACCACTGAACAAAAAGAAGCAATAAAAAGACATAAGACAAAGGTTAGAAGGACAATTAAAGTTGAAGAAGGAACTTCAAAAACTCAAGAGGTGGAAGAAGATTACTTATGCTCAATTGACCTCTAA

mRNA sequence

ATGTTGACTTGTGCCATAACCTATAAATCTAATGGTCATTCAAATAGAGAAGTCGTCATACTTCTAATTAATAGATTTAGTGGAAGTCTCAAACTGTGGTGGGATCATGCCCTAACCACTGAACAAAAAGAAGCAATAAAAAGACATAAGACAAAGGTTAGAAGGACAATTAAAGTTGAAGAAGGAACTTCAAAAACTCAAGAGGTGGAAGAAGATTACTTATGCTCAATTGACCTCTAA

Coding sequence (CDS)

ATGTTGACTTGTGCCATAACCTATAAATCTAATGGTCATTCAAATAGAGAAGTCGTCATACTTCTAATTAATAGATTTAGTGGAAGTCTCAAACTGTGGTGGGATCATGCCCTAACCACTGAACAAAAAGAAGCAATAAAAAGACATAAGACAAAGGTTAGAAGGACAATTAAAGTTGAAGAAGGAACTTCAAAAACTCAAGAGGTGGAAGAAGATTACTTATGCTCAATTGACCTCTAA

Protein sequence

MLTCAITYKSNGHSNREVVILLINRFSGSLKLWWDHALTTEQKEAIKRHKTKVRRTIKVEEGTSKTQEVEEDYLCSIDL
Homology
[Close]
BLAST of MELO3C034943 vs. NCBI nr
Match: KAA0056258.1 (hypothetical protein E6C27_scaffold226G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-20
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 8   YKSNGHSNREVVILLINRFSGSLKLWWDHALTTEQKEAIKRHKTKVRRTIKVEEGTSKTQ 67
           Y+SNGHSNRE  +LLIN FSGSLKLWWDHAL+TE+KEAIKR KTKVRR IKVEEG S TQ
Sbjct: 267 YESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQ 326

Query: 68  EVEED 73
           EVEE+
Sbjct: 327 EVEEE 331

[Close]
BLAST of MELO3C034943 vs. ExPASy TrEMBL
Match: A0A5A7UMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00260 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.2e-21
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 8   YKSNGHSNREVVILLINRFSGSLKLWWDHALTTEQKEAIKRHKTKVRRTIKVEEGTSKTQ 67
           Y+SNGHSNRE  +LLIN FSGSLKLWWDHAL+TE+KEAIKR KTKVRR IKVEEG S TQ
Sbjct: 267 YESNGHSNREAAMLLINGFSGSLKLWWDHALSTERKEAIKRQKTKVRRIIKVEEGASTTQ 326

Query: 68  EVEED 73
           EVEE+
Sbjct: 327 EVEEE 331

The following BLAST results are available for this feature:
BLAST of MELO3C034943 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0056258.11.9e-2081.54hypothetical protein E6C27_scaffold226G00260 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034943 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C034943 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UMD89.2e-2181.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C034943 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034943.1MELO3C034943.1mRNA