MELO3C034937 (gene) Melon (DHL92) v4

Overview
NameMELO3C034937
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionSodium Bile acid symporter family isoform 2
Locationchr11: 10268594 .. 10275224 (+)
RNA-Seq ExpressionMELO3C034937
SyntenyMELO3C034937
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGGTTGACATTGCGTACATCAGAAATTAGTGCCTCAGTTGAAGCGTGGCCTGTTGCAGTTTATGGGCTTGTATGATTCTCACTTATAATCTTCCATTGTATTTTTTCCTCGTAAGTTCATTCTTTGAGTATATTCGCATTTTCATATTGTTTACAATTAAGTTTTTCCCCCTTCATACTTTTCTTTTTTTGTATGTTAAAGTCCATGCTTATACGACCTTTCTAATGTTGGCAGAGTGACTTTCCGCCCACTAAAATTCATTTTTGTCTGTTTCATCATTTCCCAATGGCATGTATTTGGAATGATAATGTGATTCGTGTTACTTGACTCATTATCAGTTTAGACTTTTAACTGTTCATCCTCCTTGGTTATCTAGTTTGAAGAGGTTTTCTACGGTTTTCTACAGTGCAGTTGGATGTTTAAGTTTTGTACACTGAATTTGGATGCTTGAGTTGCAGATACCTTTTGGGGGTAGGGTGTGATACACTGATAGTTGCTCTTTTAGTAATTACAATCCTCATGGTTGGCATAAATGAAGGGATCTAAGAGATTATTACAAGAAATAACTCGAAGTTGGATCTTGGTCTTTTTGACTGTTCCTTTCTATAGTAACAAGGATGTTTTCTTATCGCTCATTTCTTTTCCAAATAAATTGACCAGCTTTGTTCATGGGAAGATTTTATGGCATATTCAATGCATGGGTCATTTGCACTGCTGTATTAATTCCGGTATATTTGTTGAGCTTGTATTCACTCTCTCTTTCTATTGTTTTTTGTCAGGTTTCGATTCTTTTGCTTACTCCGTACTTTTCCAGGCTGATATTGCAAATTCATCTTCACCCTCAAGAATTTGTAACAGGTTTGTTTATGAAATTATTTTTAGCCGTTGAATGACAGGTTAGAAATTTTATCATGTCCCTTATCCCAAAAAAAAGGACCATTTAGCCATTCAGATATTCTTGGTCCATCTTCTGCTTGAAAATTGAAGTTGCTAGCTTCATGATGAAAGTGTCATACTTTTAATCTATCATTTGTTGTGTTTAGAGAAGAAAAAATTAGAACTATTATATGCAATTTTAAAATGAGGTATAATTTGATAATACTTGCATTAGCTGAAAATTCTAAATGGTTTTCTTTTAGAACATGAACATTATATTGGTATAATATTAATTTGGAATAGATAGTCATCGTTTTATCAAGAGTTTGGTCTAATAAAGGTTTGTGCCGTGGGATATGCATCCTAGTATTTACTACTCGGTGATCCAGTTAGCCTTAAGGCCCTCAACCAAATCAAGGGACCATTTGTGTGGATAACTGAAAAATCAGTTAGGGTATGTTTGGTACAAAATTTTGAAAACAATGCATTTGATGAAAACAGAGTTGCATTCTGTATTTTCAGATATGTATTTGGGTACAGATTCAGAAATTAGATTCTAATTTTAAAAAATGTTTAAATGTGTTCAACACTATATATTTATAAATCATAAAATTAATCGTACTTATAACTAAGGATTAGTTGACAATAAACCGTTATTAATTTATGTATGAACATAATTTATATTTAAAAAATTGGTTAAATTGCAAATTTAGTCCGGGAGAAAGTAAGAGTTTAGCCTTTGTAGTTTAACAAAATCTCATGTATAGTCCTTACGAACGGGACAATTTTCTATAATTTTATCAAACCGAAGGAACTAAATTCTAATTGTAAACCACATGGACTAAATTCTATCTTTTTAAAACCGTAGAGGTCAAATGTGTAATTTAACCTAAAATATTTATATAATTATTATATTGTAATATTATATGATTTATCATACATGCCATTCTATTTATAAATGTTTTTATATGTATTTAATATAACTCTGCATTTTAAAATGTAAAATTCAATTTATGGATACAATGAAAATGTAGAAATGTTGTTTTCAGAATTTGTACAGCTTGGATCACAGATTCCGTAAACAGTTTTTAGAAATAGAATCTGGGTTGTCTGTCAAAAAAACATATATGCTGAACTCAATGAATCTGATAACTTAAAACAAAATCTGGATTCTCTACCAAACAGACATTTACTTATTTAAAATATACTTATTTACATCAGTGTTCTGCGTTTTCCGGATGGGAAGAATGTATTCAATGAATTGTAATGAGTGTTTGGTGTACAGTGTCTTCTTAGGGTAGAGTGTGTTCACTTTAATCCTGTATCTAGCAGTAAAATGATCTCTACTATTGCTTCAAATTGATGCTATTGTCATAGGAAATGGTCATTGAGGGAAGAAGGCAGAAATTCTAATAACTTGAGGACTGCTAGAAGTTCAATATTTCTAATTTGGTGTGGAACTCTAAGAAGATATGCTGACTTCCCAAAAAGTTGCAAATACCTTACAATGCGTTTGAAAATATTTTTATAGACATGAAATTCAGTTTCATTAATATAGATCAATATGCTACTCCGGGATTTCTTTTATGGTTTACTCTTTTTTTTGAGTAAGGAACCAACTTTCCCTTCAGTCTAACCCATTGTTTCTCCACTGTTTAATAGGACTAGCAATATTTTCCTGCATGCCTACTACATTATCAAGTGGTGTGGCACTAACTCAGGTACAAAGTTGCTTCCCCCTCCCACAGAAAAAAAAAGAAGTTAAATATCTCTGTTTTTATTGCATTTTTGTTTTTCAATCTCAGCTTGCTGGTGGCAATTCTGCACTTGCTCTGGCAATGACAGTGATATCAAATATGTTAGGAATATTGGCTGTGAGTTTTGAAATATCCTTACCTTTCTTTTGTTCAAATATCTAAGAATGAAAAGAATCGTATAAACTGAAAAGAATCAATGTACTAGTTTTCTAAATCCTCTTTCAGAGCTATTTTTCATCAATCAGTTCCAAAATTGTAAATTGATTCTAAAGCATGGTCTTTTGTGGTTTTTAATAAACTACTATGGTTTATTTATTAAATAAAAAAGAAAAAAACTACCGTGGTTTCTTTTATATGATCAAGTATAATCTGCATGTAAAGTGGATGTACATGTACTATTCTAGTACCATAACCAACCACCGGATACCTACTACCGTGTATCTCAGTTTATGATAATTTTGCTTCCCGTGTCAGATACTTAATGGTGTTTAACATCATACTGTCTCTCTAATTCGAGATCTTTCATTACTTTCTTAAATATTGAGGATTGCTCCATACATGCTTCTGTACACAGTTAGGTTATATAGACCTTGTGGTATATGTTTGCAGAATTCACAAAAATCACCTTATGTGAAGAGATCATTAACCATATATTTGATTATCAGTGTCAGTGCAGTTTAAGGCAACTAGCTTTTCTTTCCGGCTACTTTCTCTTTTTTCTTTTTCATAAACCTACTTTCACGACATTTTTCCTCACACTTGAAAAGGGCATAGAAGCAGCCAGAGTTGACATGTATTTTCTAGTGTCCTTTATCTTTTATTCCTTGAGACAATGTGTTCTGTTTAATTGTTACGTTACTATCATCTAGATAAAGTTGACTTTCATTCCCTAAATTTTTCTGTAGATTCCATTTTCTATATCAAAATTTATAGCTGCTGGAGTTGGTATTGCCGTTCCAACAAAGGAGTTACTCAGAAGTCTTGTACTTATCCTGCTGATTCCTCTCATTTTTGGGAAGGTAAACTGATTTTTCTTTGAAGAGACCGTTCTAAGAAGTTTGTCCCAAAGCTTGCTCTACTTCCCTTCTTACAGTTCCTAGTTATAATTGTAAGTATGGATGGTTGGGACACATAGAGTAGCAGTTTGTGATGAAGTTGTTTAAAAACGAATATATAGTTATTTTGACTTGTTTCTTGTGACAAGGAACTTCTCATCTTAGGCCAATATAAAAGCACGAGGCTTTAATCTCCAATTACGCATACAAACAATCTATAGCTTTCTCAACTTGGTCTGTTCATGTAAATTATTTGCAACAATGTGATAGAACCTGGATGTATTCACAATGTAGACGACTCATCCACAATTTAGCTGTTTTGTAACCTGAAAGGGGCATTATATTATAACTTAAATAAATAAAGGAATAAAACCAACTCAGTTTTAAAGAGGGTGTTCCTATTTCTCCTTACCCTTTGCTTTTTTTATCTTTTATTCTTTTGCTAAAAGCTTTATTTTAGACCGTGATATTGCAGAAAGTTCTTTGGTATACCATGAGATAGGTCTTACGAGTAAATAGCTTTTGAAATATGATTATGTCACTTGTTTTTTCCCTTTGTTATTAAATGCTTTTATTATCTATTTATCCCATCCTTTTCTTTACCTTTGACAGATCTTGAGAGAGTCATTCAAAGGTGATTTCTTGTCAGTTTCATTCGCTTTCTTGAGTTCAAGTTTGCTTCTTTGCTATTGCATGAAGTGTTCGAACTTCTGTTAGGATTTTCCACCTGAAACTCAGTAAAATCCAACAAAGATAGAAACAGAGGCAGCACTCTGTGACAGTATATTGATATTCAAAGATAAGGTTCACAAACAAACCAAGAGTAATAACCAAACAAGCAAAAAAGCAACAAGACACTAAAACCCAGCACCTTCGATAAGGCTGGCAACTTCTCCCTCTAAAAGCTTCAACAACTTTTTACAAAATAAAACTTACCTACACCAATCCCAAAACATTCCTTTGATAACCCCCAACCCCATCATTAGTGGGAACCCCCAGTATCTTTCCCCTTCTCTCCAATTGCTGTCTAGTGAGCAATTCCTTTCATGCCCCTGCGCTTAACCTTAGGATGGTTGCCCATCATCGTTAATGTTTAACCTTGGATAATTTTTTAGAAGAAATCTCAAAGAACTTAACCACAGAATCTCCCTAATTTATTATTATTATTAGATAAATTATTGTAAATGACAAACAGCTGAAAATATTTACAAAATATATCGAAATTTCAAATTCTGTCAATGATGGTCTGGTCACTAATAGAATCTGAAAATTCGCTGTATTTTGTAAATATTTTTGTTCATTTTGCTATATTTGAAAACGTTCCTTATTATTATTAGTTTTATTGTTCTTAATTGTTTTCGAATGTGCAGTTATTGTTTTTCTTTGTAATCTTCATTTCAGGAGTGGCTGACTTTGTTGATGGAAATCGAAAGCTTTTTCCAAGGATTAGCGCAATTCTTCTCAGTCTTGTGAGACACGAATCATTATTATCATTATTATTGTTGGCATTGTTCACTTCATGGTTGCTCTGAGTATTGTTCTCTATAAAATTGTATTTGTCTATTTGTAAATTCAAGATGCTCTATAGTCAGTTTTTATTTTTTAAGTTTATCTGGAAAGTAAAACTAATTGCTAGGGCTTGTTTGGATTGCATAAAGAAAAAAATGTTTTTTAAAAGTCATTTTTATCTAAACTCTTTTGATAAAAATGCTAAAAAGTATGCTTTGAATGTGTTTCAAAAGCTATGTTGAGTGGTTGTCAAACACTTCAATTTTTTTCAAATGGCTTATTTTCAAAATGGAACACTTGAAAAGTTAAATCAAACCACATGCTCTAATGTTTGTTAGGTTCTACATGCTCCAATGGGTAGCCACGTTGTTACAAATAATTATTAGGCTCTACATGCTCCAATATTTAATTTAATGGAATTGTTAATTTTTGTTCTTCAACTAGACTATAACATTCTAAGATCAGGTGCCATGGATGCAAGTGAGCAGATCAAGGTCACTACTTCTTATGGTCAAGCCTGAAATATTTCTCGCAGCCATAGGAATGGGAACGTAAGCAACTAAAAAGCCTTCCTAGTTTCCTAATCTTTGCCCAATAAAGCATTGAGTTTACTGGTCAAGCACAATTTTCTTTCAGATTGATGCCGCTTAAAGTCTGATACACTGTTGTATTTTCAGATTCTTGCATATCGCCTTATTGGCCTTTAATGCTCTTGGTATACGAACTCTAGCAGCCTTTTCTGGTGGTAACAAGTCTGTTTTCTCAAAGAGAAGAAATGTTAGTGCTGTTTTGCTCGTGGCAAGTCAGGTACGTAAGCATAACTCATAAGCACATTTTGTAGTGCTTCTGCAAACTCATAAGATTGTTATAGCACTTGTAAGATTGTTATCACATATCTATGGGGTGAAAAGAAAAAGAAAGAAGAGTTCCCTTTCTTTTGTGTATGGCTGTGGCAGATCTCGTCATCTCGAGCATGGACACTTTAGTTTAAGTCATGTGTTCAACATGTTATGGACACTAATGTGATAAGTACAATAGACTTGTTATACTGTCATAGTTGAACAAAATGCTACGGGCACCTTTTGAATCACTTGTTAAGCAAAGTAAAAGAGAACACATATTAGACACTCTCAAGAGCATAACGTGGAGTCTCATATACGACGTATATTTTTTGCAGAAAACTCTGCCTGTGATGGTGGCAGTTGTGGAACAGCTTCGTGGCGCGCTTGGTGAATCTGGTTTGCTGGTTCTTCCATGTATTGCGGCACATATAATCCAGGTTTCTTAGATATTTCCCTTCGAGTGTCTAATTATTTCCTTTTCAGTTCAATTGACATGAAAGTATTCTTATTTGTAGATCATCATCGACTCCTTTCTTGTCAATTTCTGGTCTACTTCGGATGGTTCATCAAATAACGTGAAGGTAACCTGA

mRNA sequence

CAGGGTTGACATTGCGTACATCAGAAATTAGTGCCTCAGTTGAAGCGTGGCCTGTTGCAGTTTATGGGCTTCTTGCTGGTGGCAATTCTGCACTTGCTCTGGCAATGACAAAAACTCTGCCTGTGATGGTGGCAGTTGTGGAACAGCTTCGTGGCGCGCTTGGTGAATCTGGTTTGCTGATCATCATCGACTCCTTTCTTGTCAATTTCTGGTCTACTTCGGATGGTTCATCAAATAACGTGAAGGTAACCTGA

Coding sequence (CDS)

GGGTTGACATTGCGTACATCAGAAATTAGTGCCTCAGTTGAAGCGTGGCCTGTTGCAGTTTATGGGCTTCTTGCTGGTGGCAATTCTGCACTTGCTCTGGCAATGACAAAAACTCTGCCTGTGATGGTGGCAGTTGTGGAACAGCTTCGTGGCGCGCTTGGTGAATCTGGTTTGCTGATCATCATCGACTCCTTTCTTGTCAATTTCTGGTCTACTTCGGATGGTTCATCAAATAACGTGAAGGTAACCTGA

Protein sequence

GLTLRTSEISASVEAWPVAVYGLLAGGNSALALAMTKTLPVMVAVVEQLRGALGESGLLIIIDSFLVNFWSTSDGSSNNVKVT
Homology
[Close]
BLAST of MELO3C034937 vs. NCBI nr
Match: XP_008455871.1 (PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 [Cucumis melo] >TYK24216.1 putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 2.4e-13
Identity = 49/67 (73.13%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFWSTSDGS
Sbjct: 360 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGS 419

[Close]
BLAST of MELO3C034937 vs. NCBI nr
Match: XP_008455871.1 (PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 [Cucumis melo] >TYK24216.1 putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-02
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   GLTLRTSEISASVEAWPVAVYGLLA 26
           GLTLRTSEISASVEAWPVAVYGL++
Sbjct: 137 GLTLRTSEISASVEAWPVAVYGLVS 161


HSP 2 Score: 85.5 bits (210), Expect = 2.4e-13
Identity = 49/67 (73.13%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFWSTSDGS
Sbjct: 337 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGS 396

[Close]
BLAST of MELO3C034937 vs. NCBI nr
Match: XP_008455872.1 (PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-02
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   GLTLRTSEISASVEAWPVAVYGLLA 26
           GLTLRTSEISASVEAWPVAVYGL++
Sbjct: 137 GLTLRTSEISASVEAWPVAVYGLVS 161


HSP 2 Score: 85.5 bits (210), Expect = 2.4e-13
Identity = 49/67 (73.13%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFWSTSDGS
Sbjct: 363 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGS 422

[Close]
BLAST of MELO3C034937 vs. NCBI nr
Match: KAA0040654.1 (putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa])

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-02
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   GLTLRTSEISASVEAWPVAVYGLLA 26
           GLTLRTSEISASVEAWPVAVYGL++
Sbjct: 137 GLTLRTSEISASVEAWPVAVYGLVS 161


HSP 2 Score: 79.3 bits (194), Expect = 1.7e-11
Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFW TSD S
Sbjct: 362 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIVQIIIDSFLVNFWFTSDDS 421

[Close]
BLAST of MELO3C034937 vs. NCBI nr
Match: XP_004151888.1 (probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus] >KGN63253.1 hypothetical protein Csa_022589 [Cucumis sativus])

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-02
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   GLTLRTSEISASVEAWPVAVYGLLA 26
           GLTLRTSEISASVEAWPVAVYGL++
Sbjct: 139 GLTLRTSEISASVEAWPVAVYGLVS 163


HSP 2 Score: 77.8 bits (190), Expect = 4.9e-11
Identity = 48/86 (55.81%), Postives = 56/86 (65.12%), Query Frame = 0 

Query: 9   ISASVEAWPVAVYGLLAGGNSALALAMTKTLPVMVAVVEQLRGALGESGLL--------- 68
           I A+V     +V+      ++ L +A  KTLPVMVAVVEQLRGALG+SGLL         
Sbjct: 339 ILAAVSGGSQSVFSRRRNASAVLLVASQKTLPVMVAVVEQLRGALGKSGLLVLPCVAAHI 398

Query: 69  --IIIDSFLVNFWSTSDGSSNNVKVT 84
             IIIDSFLVNFW  SD SSNNVKV+
Sbjct: 399 IQIIIDSFLVNFWPRSDDSSNNVKVS 424

[Close]
BLAST of MELO3C034937 vs. ExPASy Swiss-Prot
Match: B8AJ09 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.5e-07
Identity = 37/84 (44.05%), Postives = 47/84 (55.95%), Query Frame = 0 

Query: 9   ISASVEAWPVAVYGLLAGGNSALALAMTKTLPVMVAVVEQLRGALGESGLL--------- 68
           I + +E   V+V+       + + +A  KTLPV+VAVVEQL GALGESGLL         
Sbjct: 340 ILSRLEQRGVSVFARNEYARAVILVASQKTLPVLVAVVEQLGGALGESGLLVIPCVAAHI 399

Query: 69  --IIIDSFLVNFWSTSDGSSNNVK 82
             IIIDS +VN+W   D    N K
Sbjct: 400 NQIIIDSIIVNWWRQRDQQFANAK 423

[Close]
BLAST of MELO3C034937 vs. ExPASy Swiss-Prot
Match: Q6ESG1 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.5e-07
Identity = 37/84 (44.05%), Postives = 47/84 (55.95%), Query Frame = 0 

Query: 9   ISASVEAWPVAVYGLLAGGNSALALAMTKTLPVMVAVVEQLRGALGESGLL--------- 68
           I + +E   V+V+       + + +A  KTLPV+VAVVEQL GALGESGLL         
Sbjct: 340 ILSRLEQRGVSVFARNEYARAVILVASQKTLPVLVAVVEQLGGALGESGLLVIPCVAAHI 399

Query: 69  --IIIDSFLVNFWSTSDGSSNNVK 82
             IIIDS +VN+W   D    N K
Sbjct: 400 NQIIIDSIIVNWWRQRDQQFANAK 423

[Close]
BLAST of MELO3C034937 vs. ExPASy Swiss-Prot
Match: F4IZC4 (Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS4 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.5e-05
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 0 

Query: 22  GLLAGGNSA-------LALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIID 71
           GL  G  S+       L ++  KTLPVMVAVVEQL GA GE+GLL           I+ID
Sbjct: 356 GLTGGSKSSKENSTAVLLVSSQKTLPVMVAVVEQLGGAFGETGLLVLPCVAAHLNQIMID 415

[Close]
BLAST of MELO3C034937 vs. ExPASy TrEMBL
Match: A0A5A7TB17 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00080 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13
Identity = 49/67 (73.13%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFWSTSDGS
Sbjct: 363 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGS 422

[Close]
BLAST of MELO3C034937 vs. ExPASy TrEMBL
Match: A0A5A7TB17 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00080 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-02
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   GLTLRTSEISASVEAWPVAVYGLLA 26
           GLTLRTSEISASVEAWPVAVYGL++
Sbjct: 137 GLTLRTSEISASVEAWPVAVYGLVS 161


HSP 2 Score: 85.5 bits (210), Expect = 1.1e-13
Identity = 49/67 (73.13%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFWSTSDGS
Sbjct: 360 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGS 419

[Close]
BLAST of MELO3C034937 vs. ExPASy TrEMBL
Match: A0A5D3DKR1 (Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00180 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-02
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   GLTLRTSEISASVEAWPVAVYGLLA 26
           GLTLRTSEISASVEAWPVAVYGL++
Sbjct: 137 GLTLRTSEISASVEAWPVAVYGLVS 161


HSP 2 Score: 85.5 bits (210), Expect = 1.1e-13
Identity = 49/67 (73.13%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFWSTSDGS
Sbjct: 337 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGS 396

[Close]
BLAST of MELO3C034937 vs. ExPASy TrEMBL
Match: A0A1S3C1I1 (probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495958 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-02
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   GLTLRTSEISASVEAWPVAVYGLLA 26
           GLTLRTSEISASVEAWPVAVYGL++
Sbjct: 137 GLTLRTSEISASVEAWPVAVYGLVS 161


HSP 2 Score: 85.5 bits (210), Expect = 1.1e-13
Identity = 49/67 (73.13%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFWSTSDGS
Sbjct: 360 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIIQIIIDSFLVNFWSTSDGS 419

[Close]
BLAST of MELO3C034937 vs. ExPASy TrEMBL
Match: A0A1S3C366 (probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495958 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-02
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   GLTLRTSEISASVEAWPVAVYGLLA 26
           GLTLRTSEISASVEAWPVAVYGL++
Sbjct: 137 GLTLRTSEISASVEAWPVAVYGLVS 161


HSP 2 Score: 79.3 bits (194), Expect = 8.2e-12
Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 28  NSALALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIIDSFLVNFWSTSDGS 84
           ++ L +A  KTLPVMVAVVEQLRGALGESGLL           IIIDSFLVNFW TSD S
Sbjct: 362 SAVLLVASQKTLPVMVAVVEQLRGALGESGLLVLPCIAAHIVQIIIDSFLVNFWFTSDDS 421

[Close]
BLAST of MELO3C034937 vs. TAIR 10
Match: AT3G56160.1 (Sodium Bile acid symporter family )

HSP 1 Score: 48.1 bits (113), Expect = 3.9e-06
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 0 

Query: 22  GLLAGGNSA-------LALAMTKTLPVMVAVVEQLRGALGESGLL-----------IIID 71
           GL  G  S+       L ++  KTLPVMVAVVEQL GA GE+GLL           I+ID
Sbjct: 356 GLTGGSKSSKENSTAVLLVSSQKTLPVMVAVVEQLGGAFGETGLLVLPCVAAHLNQIMID 415

The following BLAST results are available for this feature:
BLAST of MELO3C034937 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455871.12.4e-1373.13PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform... [more]
XP_008455871.12.4e-0292.00PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform... [more]
XP_008455872.12.4e-0292.00PREDICTED: probable sodium/metabolite cotransporter BASS4, chloroplastic isoform... [more]
KAA0040654.12.4e-0292.00putative sodium/metabolite cotransporter BASS4 [Cucumis melo var. makuwa][more]
XP_004151888.12.4e-0292.00probable sodium/metabolite cotransporter BASS4, chloroplastic [Cucumis sativus] ... [more]
BLAST of MELO3C034937 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B8AJ094.5e-0744.05Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa su... [more]
Q6ESG14.5e-0744.05Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa su... [more]
F4IZC45.5e-0549.25Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis tha... [more]
BLAST of MELO3C034937 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TB171.1e-1373.13Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11... [more]
A0A5A7TB171.2e-0292.00Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11... [more]
A0A5D3DKR11.2e-0292.00Putative sodium/metabolite cotransporter BASS4 OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S3C1I11.2e-0292.00probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X2 OS=Cucu... [more]
A0A1S3C3661.2e-0292.00probable sodium/metabolite cotransporter BASS4, chloroplastic isoform X1 OS=Cucu... [more]

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BLAST of MELO3C034937 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G56160.13.9e-0649.25Sodium Bile acid symporter family [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034937.1MELO3C034937.1mRNA