MELO3C034916 (gene) Melon (DHL92) v4

Overview
NameMELO3C034916
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCysteine-rich RLK (Receptor-like protein kinase) 8
Locationchr12: 8095293 .. 8095869 (+)
RNA-Seq ExpressionMELO3C034916
SyntenyMELO3C034916
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGTTTGTTTAAATCAGGTTATGATTGATGAAGAAATTCCTTGTCAAAAGTTAGGTTTCCATCTCCCTTCAAGGTTGAACTCGAACCTTCAAAGGAATCCTTAGAAGGTTGATACGGACCTCATCGGAGTTTCACCAAAAGTCCAAGGAAGATTCTGATTACAGGGAGCAATCTTGTCAAATCTCCAGCAATTGTGAACTCCGTTAAAGGTAGTTTGCTGTTATTCGCTAAGGCGTTAAGTAATTCAGATGACCGTTCAAATTCAGAAGGGAGCAAAAGTATGGAAGATGAAGAGGTGCAATTAGTGAGAAAAGAGAAAAATCCTGCTGTGCCACCTGTCTTACCCATTGAATTCCAAGAGCCACTCGTGAGTAATGATCTGCTGGCTAAGTCCTTTTCGGTACCTAATAGGAAGTTAAGAGTTAATTTTGCAGCTAACAAAAGACTAAATGCCAAAACGCCCAATTTTTTTTAATTTTCAGCAAAGGTAGCCTATCAGTCACAAGGCCCTCTTACAAACACTTTGAGCTCCTCCTACAGCAGATCGTTGCCCCAAGTTTATTCAGTTCCGTTAG

mRNA sequence

TATGGTTTGTTTAAATCAGGTTATGATTGATGAAGAAATTCCTTGTCAAAAGTTAGGTTTCCATCTCCCTTCAAGGTTGAACTCGAACCTTCAAAGGAATCCTTAGAAGGTTGATACGGACCTCATCGGAGTTTCACCAAAAGTCCAAGGAAGATTCTGATTACAGGGAGCAATCTTGTCAAATCTCCAGCAATTGTGAACTCCGTTAAAGGTAGTTTGCTGTTATTCGCTAAGGCGTTAAGTAATTCAGATGACCGTTCAAATTCAGAAGGGAGCAAAAGTATGGAAGATGAAGAGGTGCAATTAGTGAGAAAAGAGAAAAATCCTGCTGTGCCACCTGTCTTACCCATTGAATTCCAAGAGCCACTCGTGAGTAATGATCTGCTGGCTAAGTCCTTTTCGGTACCTAATAGGAAGTTAAGAGTTAATTTTGCAGCTAACAAAAGACTAAATGCCAAAACGCCCAATTTTTTTTAATTTTCAGCAAAGGTAGCCTATCAGTCACAAGGCCCTCTTACAAACACTTTGAGCTCCTCCTACAGCAGATCGTTGCCCCAAGTTTATTCAGTTCCGTTAG

Coding sequence (CDS)

ATGGAAGATGAAGAGGTGCAATTAGTGAGAAAAGAGAAAAATCCTGCTGTGCCACCTGTCTTACCCATTGAATTCCAAGAGCCACTCGTGAGTAATGATCTGCTGGCTAAGTCCTTTTCGGTACCTAATAGGAAGTTAAGAGTTAATTTTGCAGCTAACAAAAGACTAAATGCCAAAACGCCCAATTTTTTTTAA

Protein sequence

MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKLRVNFAANKRLNAKTPNFF
Homology
[Close]
BLAST of MELO3C034916 vs. NCBI nr
Match: TYK20921.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 6.9e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1   MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKL 47
           MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFS   RKL
Sbjct: 143 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSSHTRKL 188

[Close]
BLAST of MELO3C034916 vs. NCBI nr
Match: KAA0032563.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 6.9e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1   MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKL 47
           MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFS   RKL
Sbjct: 143 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSSHTRKL 188

[Close]
BLAST of MELO3C034916 vs. NCBI nr
Match: TYK22383.1 (uncharacterized protein E5676_scaffold173G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 3.4e-12
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 0 

Query: 1   MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVS-NDLLAKSFSVPNRKLRVNFAANKRLNAK 60
           +EDEEVQLVR+EKNP VPPVLPIE         D  AKSFSV N+KLRVNFA NK+L+AK
Sbjct: 162 VEDEEVQLVREEKNPVVPPVLPIEIPRTTHEFKDTAAKSFSVLNKKLRVNFADNKKLDAK 221

Query: 61  TPNFF 65
            PN F
Sbjct: 222 PPNLF 226

[Close]
BLAST of MELO3C034916 vs. ExPASy TrEMBL
Match: A0A5A7SQA9 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43053G00220 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1   MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKL 47
           MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFS   RKL
Sbjct: 143 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSSHTRKL 188

[Close]
BLAST of MELO3C034916 vs. ExPASy TrEMBL
Match: A0A5D3DBC6 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00640 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-13
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0 

Query: 1   MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSVPNRKL 47
           MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFS   RKL
Sbjct: 143 MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVSNDLLAKSFSSHTRKL 188

[Close]
BLAST of MELO3C034916 vs. ExPASy TrEMBL
Match: A0A5D3DFR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00060 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-12
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 0 

Query: 1   MEDEEVQLVRKEKNPAVPPVLPIEFQEPLVS-NDLLAKSFSVPNRKLRVNFAANKRLNAK 60
           +EDEEVQLVR+EKNP VPPVLPIE         D  AKSFSV N+KLRVNFA NK+L+AK
Sbjct: 162 VEDEEVQLVREEKNPVVPPVLPIEIPRTTHEFKDTAAKSFSVLNKKLRVNFADNKKLDAK 221

Query: 61  TPNFF 65
            PN F
Sbjct: 222 PPNLF 226

The following BLAST results are available for this feature:
BLAST of MELO3C034916 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C034916 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK20921.16.9e-1393.48Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa][more]
KAA0032563.16.9e-1393.48Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa][more]
TYK22383.13.4e-1267.69uncharacterized protein E5676_scaffold173G00060 [Cucumis melo var. makuwa][more]
BLAST of MELO3C034916 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SQA93.3e-1393.48Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3DBC63.3e-1393.48Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3DFR01.7e-1267.69Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C034916 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034916.1MELO3C034916.1mRNA