MELO3C034887 (gene) Melon (DHL92) v4

Overview
NameMELO3C034887
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTPRXL protein
Locationchr01: 24251301 .. 24251530 (+)
RNA-Seq ExpressionMELO3C034887
SyntenyMELO3C034887
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATGGAAGCAAATGAAGAAAGTATTAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTATTGCAGACAACATATGAAGAAAGAGTTGCAGCAAGAGATCAACTGCAGAAGGAAACAATGTGTGCCAAGGAGTACTGGAACCAACATGAAAAATGATGGTCGTTGTCAAGTTACTATGATATTGTAAAAGGAGAAGGAAACAATAATGCCAATCCTACTATGATATTA

mRNA sequence

ACATGGAAGCAAATGAAGAAAGTATTAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTATTGCAGACAACATATGAAGAAAGAGTTGCAGCAAGAGATCAACTGCAGAAGGAAACAATGTGTGCCAAGGAGTACTGGAACCAACATGAAAAATGATGGTCGTTGTCAAGTTACTATGATATTGTAAAAGGAGAAGGAAACAATAATGCCAATCCTACTATGATATTA

Coding sequence (CDS)

ATGGAAGCAAATGAAGAAAGTATTAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTATTGCAGACAACATATGAAGAAAGAGTTGCAGCAAGAGATCAACTGCAGAAGGAAACAATGTGTGCCAAGGAGTACTGGAACCAACATGAAAAATGA

Protein sequence

MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQKETMCAKEYWNQHEK
Homology
BLAST of MELO3C034887 vs. NCBI nr
Match: KAA0054205.1 (TPRXL protein [Cucumis melo var. makuwa] >TYK15058.1 TPRXL protein [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 6.5e-14
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQKETMCAKEYWNQHEK 52
          MEANEESIKNKEKVKSLL+LLQ  ++ER  ARDQLQKETMCA+EYWNQHEK
Sbjct: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEK 56

BLAST of MELO3C034887 vs. NCBI nr
Match: KAG6605486.1 (hypothetical protein SDJN03_02803, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 60.8 bits (146), Expect = 3.8e-06
Identity = 33/37 (89.19%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQK 38
          MEANEESIKNKEKVKSLLLLLQ  YEER  ARDQLQK
Sbjct: 33 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 69

BLAST of MELO3C034887 vs. NCBI nr
Match: KAG7010574.1 (hypothetical protein SDJN02_27368 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 60.8 bits (146), Expect = 3.8e-06
Identity = 33/37 (89.19%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQK 38
          MEANEESIKNKEKVKSLLLLLQ  YEER  ARDQLQK
Sbjct: 33 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 69

BLAST of MELO3C034887 vs. NCBI nr
Match: XP_023007333.1 (uncharacterized protein LOC111499860 isoform X2 [Cucurbita maxima])

HSP 1 Score: 60.8 bits (146), Expect = 3.8e-06
Identity = 33/37 (89.19%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQK 38
          MEANEESIKNKEKVKSLLLLLQ  YEER  ARDQLQK
Sbjct: 12 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 48

BLAST of MELO3C034887 vs. NCBI nr
Match: XP_022986908.1 (uncharacterized protein LOC111484506 [Cucurbita maxima])

HSP 1 Score: 60.8 bits (146), Expect = 3.8e-06
Identity = 33/37 (89.19%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQK 38
          MEANEESIKNKEKVKSLLLLLQ  YEER  ARDQLQK
Sbjct: 47 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 83

BLAST of MELO3C034887 vs. ExPASy TrEMBL
Match: A0A5A7UKK3 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001080 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-14
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQKETMCAKEYWNQHEK 52
          MEANEESIKNKEKVKSLL+LLQ  ++ER  ARDQLQKETMCA+EYWNQHEK
Sbjct: 6  MEANEESIKNKEKVKSLLILLQAAHDERDEARDQLQKETMCAEEYWNQHEK 56

BLAST of MELO3C034887 vs. ExPASy TrEMBL
Match: A0A6J1L7E2 (uncharacterized protein LOC111499860 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499860 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06
Identity = 33/37 (89.19%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQK 38
          MEANEESIKNKEKVKSLLLLLQ  YEER  ARDQLQK
Sbjct: 12 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 48

BLAST of MELO3C034887 vs. ExPASy TrEMBL
Match: A0A6J1JHW9 (uncharacterized protein LOC111484506 OS=Cucurbita maxima OX=3661 GN=LOC111484506 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06
Identity = 33/37 (89.19%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQK 38
          MEANEESIKNKEKVKSLLLLLQ  YEER  ARDQLQK
Sbjct: 47 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 83

BLAST of MELO3C034887 vs. ExPASy TrEMBL
Match: A0A6J1KYE1 (uncharacterized protein LOC111499860 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499860 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06
Identity = 33/37 (89.19%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQK 38
          MEANEESIKNKEKVKSLLLLLQ  YEER  ARDQLQK
Sbjct: 61 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 97

BLAST of MELO3C034887 vs. ExPASy TrEMBL
Match: A0A6J1D3L3 (uncharacterized protein LOC111016987 OS=Momordica charantia OX=3673 GN=LOC111016987 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06
Identity = 33/37 (89.19%), Postives = 33/37 (89.19%), Query Frame = 0

Query: 1  MEANEESIKNKEKVKSLLLLLQTTYEERVAARDQLQK 38
          MEANEESIKNKEKVKSLLLLLQ  YEER  ARDQLQK
Sbjct: 61 MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQK 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0054205.16.5e-1484.31TPRXL protein [Cucumis melo var. makuwa] >TYK15058.1 TPRXL protein [Cucumis melo... [more]
KAG6605486.13.8e-0689.19hypothetical protein SDJN03_02803, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7010574.13.8e-0689.19hypothetical protein SDJN02_27368 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023007333.13.8e-0689.19uncharacterized protein LOC111499860 isoform X2 [Cucurbita maxima][more]
XP_022986908.13.8e-0689.19uncharacterized protein LOC111484506 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UKK33.1e-1484.31TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001080 ... [more]
A0A6J1L7E21.9e-0689.19uncharacterized protein LOC111499860 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1JHW91.9e-0689.19uncharacterized protein LOC111484506 OS=Cucurbita maxima OX=3661 GN=LOC111484506... [more]
A0A6J1KYE11.9e-0689.19uncharacterized protein LOC111499860 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1D3L31.9e-0689.19uncharacterized protein LOC111016987 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C034887.1MELO3C034887.1mRNA